BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jm3101_genome.fa 154 sequences; 527,895,757 total letters Query= Length=1921 Score E Sequences producing significant alignments: (Bits) Value lcl|Jm2D 260 3e-67 lcl|Jm2S 233 4e-59 lcl|Jm1D 201 2e-49 lcl|Jm6S 41.0 0.47 lcl|Jm6D 41.0 0.47 lcl|Jm1S 41.0 0.47 lcl|Jm8D 39.2 1.6 lcl|Jm7D 39.2 1.6 lcl|Jm8S 37.4 5.7 lcl|Jm7S 37.4 5.7 lcl|Jm5S 37.4 5.7 lcl|Jm5D 37.4 5.7 lcl|Jm4S 37.4 5.7 lcl|Jm4D 37.4 5.7 lcl|Jm3D 37.4 5.7 >Query1 on lcl|Jm2D| Query1 on lcl|Jm2D Length=43614719 Score = 260 bits (288), Expect = 3e-67 Identities = 261/339 (77%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 666 CAGGGCTGAAACCAAGTACTATCTATTACTATCGATGTGGAGATCCTTCAAGACGGGCTA 725 ||||| |||||||||| || | || || ||||||||||||||||| || || || | Sbjct 15878360 CAGGGTTGAAACCAAGCACACTATACTATTATCGATGTGGAGATCCATCTCTACCAGCCA 15878419 Query 726 TGAGTAAGATACACCATTTCAGGACAATGCCTGTTTCTAGTCCCTCGAGTTATCCTGGTC 785 ||||||| || || |||||||| ||||| | |||| ||| ||||||||| | Sbjct 15878420 TGAGTAAAATCTACTCCTTCAGGACCATGCCAGCTTCTCATCCGAGGAGTTATCCAGACA 15878479 Query 786 GAATAGCGGTTGTTGGTGATCTTGGTCTCACTTATAACACTACTGATACAATTAGTCACT 845 |||||| |||||||| ||||||||||| || ||||| || ||| || || ||||||| Sbjct 15878480 AAATAGCAGTTGTTGGAGATCTTGGTCTTACATATAATACAACTACCACTATCAGTCACT 15878539 Query 846 TGATTCATAACTCTCCGGATCTCATTTTATTGATCGGCGACGTGAGTTATGCAAACTTGT 905 ||||| ||| || ||||| || ||||| | || || || | ||||||||| | | Sbjct 15878540 TGATTAGTAATAAACCTGATCTTGTTCTATTGGTTGGTGATGTTACTTATGCAAATCTAT 15878599 Query 906 ATCTAACAAACGGGACTAGCTCTGATTGTTATTCTTGCTCTTTCCCTGAGACACCTATAC 965 |||| ||||| |||||| |||| ||||||||||||||||| || || | || || |||| Sbjct 15878600 ATCTCACAAATGGGACTGGCTCCGATTGTTATTCTTGCTCATTTCCACAAACTCCCATAC 15878659 Query 966 ATGAGACGTATCAGCCACGTTGGGACTACTGGGGTAGGT 1004 ||||||| |||||||| |||||||| |||||||| |||| Sbjct 15878660 ATGAGACATATCAGCCTCGTTGGGATTACTGGGGAAGGT 15878698 Score = 188 bits (208), Expect = 1e-45 Identities = 222/300 (74%), Gaps = 9/300 (3%) Strand=Plus/Plus Query 1496 AAAACTTATTTCCAGGTGCATGCTTATGAACGGTCGAACAGAGTATACAATTACGAACTG 1555 |||| | || |||||| ||||||||||| |||| || |||| || || ||| | Sbjct 15880621 AAAAGTAATCACCAGGTACATGCTTATGAGAGGTCAAATCGAGTGTATAACTACACCTTA 15880680 Query 1556 GACCCATGTGGTCCAGTTTACATTGTGATTGGTGATGGAGGTAACCGTGAAAAGATGGCG 1615 || ||||||||||| || || || |||| ||||| ||||| || ||||||||||| Sbjct 15880681 GATCCATGTGGTCCGGTATATATCACAGTTGGAGATGGGGGTAATCGAGAAAAGATGGCA 15880740 Query 1616 ATCGAGCATGCAGATGACCCCGGTAAATGTCCAGAGCCGTTAACCACGCCCGATCCAGTC 1675 || | ||||| ||||| || || || |||||||| ||||| || || || || | | | Sbjct 15880741 ATTAAACATGCTGATGATCCTGGCAACTGTCCAGACCCGTTGACTACTCCAGACCAATAC 15880800 Query 1676 ATGGGTGGGTTTTGCGCGTGGAACTTCAC-----GC----CGTCTGATAAGTTCTGTTGG 1726 || ||||| ||||| || || || || || || ||| |||||||||||| Sbjct 15880801 ATTGGTGGTTTTTGTGCTACAAATTTTACATCTGGCCCAGCGGCTGGCAAGTTCTGTTGG 15880860 Query 1727 GATCGGCAACCTGATTATAGTGCCCTGAGAGAAAGCAGCTTTGGCCATGGAATCCTAGAG 1786 || || |||||||| || || ||| |||||||||| |||||||||||||| ||||||||| Sbjct 15880861 GACCGCCAACCTGAATACAGCGCCTTGAGAGAAAGTAGCTTTGGCCATGGTATCCTAGAG 15880920 Score = 170 bits (188), Expect = 4e-40 Identities = 157/199 (79%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1218 CAGCGGAACAATATGAATGGTTAAAGAAGGATTTGGCTAAAGTCGATAGATCGGTAACTC 1277 ||||||| || || | ||| || ||| ||| ||||||| || || ||||| |||||| Sbjct 15879344 CAGCGGATCAGTACAAGTGGCTAGAGAGGGACTTGGCTAGTGTTGACAGATCAATAACTC 15879403 Query 1278 CATGGTTAGTAGCTTCTTGGCATCCACCTTGGTATAGTTCTTATACAGCGCATTACAGAG 1337 ||||| | |||||| ||||||| ||||||||||| ||||| ||| ||| ||||| |||| Sbjct 15879404 CATGGCTGGTAGCTGCTTGGCACCCACCTTGGTACAGTTCCTATCAAGCTCATTATAGAG 15879463 Query 1338 AAGCAGAATGTATGAAAGAAGCTATGGAGGAATTACTTTATTCTTATGGTACCGACATTG 1397 | | ||| ||||||| | || ||||| || |||||||| ||||||||| ||||| | Sbjct 15879464 AGGTAGAGTGTATGAGGGTGGCAATGGAAGAGTTACTTTACTCTTATGGTGTTGACATAG 15879523 Query 1398 TCTTTAACGGACATGTAAG 1416 |||| || ||||||||||| Sbjct 15879524 TCTTCAATGGACATGTAAG 15879542 Score = 143 bits (158), Expect = 5e-32 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 1001 AGGTTTATGGAGAATCTGACTTCCAAAGTTCCTTTGATGGTGATTGAAGGGAACCATGAG 1060 ||||| ||| ||||| | ||| |||||||| | |||||| ||||||| |||||||| Sbjct 15878815 AGGTTCATGCAGAATTTAGTTTCTAAAGTTCCAATAATGGTGGTTGAAGGAAACCATGAA 15878874 Query 1061 ATCGAATTGCAAGCAGAGAACAAGACATTTGAAGCTTATAGTTCAAGATTCGCTTTCCCT 1120 || ||| ||||| | | | |||||||| ||||||||||| | || || ||||| Sbjct 15878875 ATAGAAGCACAAGCTGGAAGCCAGACATTTTCTGCTTATAGTTCTCGGTTTGCATTCCCA 15878934 Query 1121 TTTAATGAAAGCGGCTCGTCTTCTACGCTATATTATTCCTTTAACGCTGGTGGGATTCAC 1180 | | | ||||| || || || || || | ||||| |||||||| | |||||||| || Sbjct 15878935 TCTGAAGAAAGTGGATCTTCATCCACATTCTATTACTCCTTTAATGTAGGTGGGATACAT 15878994 Query 1181 TTTGTTATGCTTGGTGCCTACATTGCGTA 1209 ||||| |||||||| ||||| ||||| || Sbjct 15878995 TTTGTAATGCTTGGGGCCTATATTGCTTA 15879023 Score = 132 bits (146), Expect = 1e-28 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 474 CAGGTGAGTTCCAAATCGGAAAGAAGGTGAAGCCATTAGATCCGACAAGTATCAACAGTG 533 ||||||| | |||||||| | || | | ||| ||||| || | || | || |||| Sbjct 15876249 CAGGTGAATCACAAATCGGTTACAACATAAGGCCGTTAGACCCTAAAACTGTCTCGAGTG 15876308 Query 534 TTGTTCAATTCGGAACCTTGAGGCACTCACTGAGTCATGAAGCTAAAGGACATTCACTTG 593 |||||| | || | ||| || | |||||| |||||||| | |||| |||| || | Sbjct 15876309 TTGTTCGTTATGGGAACTTAAGATATCCACTGATACATGAAGCCACAGGATATTCTCTGG 15876368 Query 594 TTTATAGTCAACTTTATCCTTTCGACGGTCTCCTTAACTACACTTCTGGAATCATACACC 653 |||| ||||| ||||||||||| || ||||||| || ||||| ||||||||||| || | Sbjct 15876369 TTTACAGTCAGCTTTATCCTTTTGAAGGTCTCCAAAATTACACCTCTGGAATCATCCATC 15876428 Query 654 ATGTTCGCATTACAGG 669 ||||||| ||||||| Sbjct 15876429 ATGTTCGTCTTACAGG 15876444 Score = 122 bits (134), Expect = 2e-25 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 287 ATTCCGTCAACTTTAGATGGACCGTTCGTTCCGGTGACGGTGCCATTGGACACCTCTCTC 346 |||||||| ||| | ||||| ||||||| || ||||||||||| || || | ||| Sbjct 15874457 ATTCCGTCGACTCTGGATGGCCCGTTCGAGCCCGTGACGGTGCCGTTCGATGCTAATCTG 15874516 Query 347 CGGGGGCAAGCCATCGATTTGCCCGACACCGATCCCCGCGTCCGCCGGCGTGTCATTGGT 406 || || | || | |||||||| || | |||||| | || | || || |||| || Sbjct 15874517 CGTGGCAATGCGGTTGATTTGCCGGAATCGGATCCCAGGGTTCAGCGCCGCGTCAAGGGG 15874576 Query 407 TTTGAGCCGGAGCAAAtctctctctccctctcctcCGATCATGATTCCATCTGGGTCTCT 466 || ||||| ||||| || || |||||||||||||| | | || ||| ||||| |||| Sbjct 15874577 TTCGAGCCCGAGCAGATTTCGGTCTCCCTCTCCTCCCACTACGACTCCGTCTGGATCTCC 15874636 Query 467 TGGATCACAGGT 478 |||||||||||| Sbjct 15874637 TGGATCACAGGT 15874648 Score = 77.0 bits (84), Expect = 6e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 1785 AGATGAAGAACGAGACATGGGCACTATGGACATGGTATAGGAATCAAGACTCGAGCAGTG 1844 || ||||||| || || ||||| ||||||||||||| | ||||| ||||| ||||| Sbjct 15881388 AGGTGAAGAATGAAACTTGGGCCTTATGGACATGGTACCGAAATCAGGACTCTTACAGTG 15881447 Query 1845 AAGTCGGAGATCAGATTTATATTGTGAGACAACCT 1879 |||| || ||||| || || || || || |||||| Sbjct 15881448 AAGTTGGGGATCAAATCTACATAGTAAGGCAACCT 15881482 Score = 39.2 bits (42), Expect = 1.6 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1476 GTTATGTTTTTTCTTTTGTGAAAACT 1501 ||||| |||||| ||||||||||||| Sbjct 38414170 GTTATTTTTTTTTTTTTGTGAAAACT 38414145 Score = 39.2 bits (42), Expect = 1.6 Identities = 38/48 (79%), Gaps = 1/48 (2%) Strand=Plus/Plus Query 834 CAATTAGTCACTTGATTCAT-AACTCTCCGGATCTCATTTTATTGATC 880 ||||||||||||| |||||| || ||| |||||||||||||| Sbjct 40320619 CAATTAGTCACTTCATTCATCAAGAAATTGGAATTCATTTTATTGATC 40320666 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTT 1506 |||| | || ||||||||||||| |||||| Sbjct 12249942 TTATTTGTTGTCTTTTGTGAAAATTTATTT 12249913 Score = 37.4 bits (40), Expect = 5.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1674 TCATGGGTGGGTTTTGCGCGTGG 1696 ||||||||||||||||| ||||| Sbjct 13234217 TCATGGGTGGGTTTTGCTCGTGG 13234239 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1007 ATGGAGAATCTGACTTCCAAAGTTCCTTTG 1036 ||| |||||||||||||| ||| || |||| Sbjct 35094237 ATGAAGAATCTGACTTCCCAAGGTCTTTTG 35094208 >Query1 on lcl|Jm2S| Query1 on lcl|Jm2S Length=34707362 Score = 233 bits (258), Expect = 4e-59 Identities = 255/339 (75%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 666 CAGGGCTGAAACCAAGTACTATCTATTACTATCGATGTGGAGATCCTTCAAGACGGGCTA 725 ||||| ||||||| || || | || | ||||||||||||||| || || | || || | Sbjct 10164241 CAGGGTTGAAACCGAGCACATTATACTTCTATCGATGTGGAGACCCATCTATACCAGCCA 10164300 Query 726 TGAGTAAGATACACCATTTCAGGACAATGCCTGTTTCTAGTCCCTCGAGTTATCCTGGTC 785 ||||||| | ||| |||| ||| ||||| ||||| |||| | |||||| | Sbjct 10164301 TGAGTAAATTCCACTCCTTCAAGACTATGCCAATTTCTGGTCCAAGAATTTATCCGGACA 10164360 Query 786 GAATAGCGGTTGTTGGTGATCTTGGTCTCACTTATAACACTACTGATACAATTAGTCACT 845 ||||||| || || || ||||||||||| || ||||| || ||| || || ||||||| Sbjct 10164361 GAATAGCAGTAGTGGGAGATCTTGGTCTTACGTATAATACAACTACCACCATCAGTCACT 10164420 Query 846 TGATTCATAACTCTCCGGATCTCATTTTATTGATCGGCGACGTGAGTTATGCAAACTTGT 905 ||||| ||| || ||||| || ||||| | || || || | ||||||||| | | Sbjct 10164421 TGATTAGTAATAAACCTGATCTTGTTCTATTGGTTGGTGATGTTACTTATGCAAATCTCT 10164480 Query 906 ATCTAACAAACGGGACTAGCTCTGATTGTTATTCTTGCTCTTTCCCTGAGACACCTATAC 965 |||| ||||| ||||| |||||||| |||||||||||||| || || | || || || | Sbjct 10164481 ATCTCACAAATGGGACCAGCTCTGACTGTTATTCTTGCTCATTTCCACAAACTCCCATTC 10164540 Query 966 ATGAGACGTATCAGCCACGTTGGGACTACTGGGGTAGGT 1004 |||| || |||||||| |||||||| |||||||| |||| Sbjct 10164541 ATGAAACTTATCAGCCTCGTTGGGATTACTGGGGAAGGT 10164579 Score = 179 bits (198), Expect = 7e-43 Identities = 159/199 (80%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1218 CAGCGGAACAATATGAATGGTTAAAGAAGGATTTGGCTAAAGTCGATAGATCGGTAACTC 1277 ||||||| ||||| | ||| || ||| || ||||| || || |||||||| |||||| Sbjct 10165835 CAGCGGATCAATACAAGTGGCTAGAGAGAGACTTGGCAAATGTTGATAGATCAATAACTC 10165894 Query 1278 CATGGTTAGTAGCTTCTTGGCATCCACCTTGGTATAGTTCTTATACAGCGCATTACAGAG 1337 ||||| |||||||| ||||||| ||||||||||| ||||| || | ||| ||||| || | Sbjct 10165895 CATGGCTAGTAGCTGCTTGGCACCCACCTTGGTACAGTTCCTACAAAGCTCATTATAGGG 10165954 Query 1338 AAGCAGAATGTATGAAAGAAGCTATGGAGGAATTACTTTATTCTTATGGTACCGACATTG 1397 | | ||| || |||| | || ||||| || |||||||| ||||||||| ||||||| Sbjct 10165955 AGGTAGAGTGCATGAGGGTGGCGATGGAAGAGTTACTTTACTCTTATGGTGTTGACATTG 10166014 Query 1398 TCTTTAACGGACATGTAAG 1416 ||||||| ||||||||||| Sbjct 10166015 TCTTTAATGGACATGTAAG 10166033 Score = 179 bits (198), Expect = 7e-43 Identities = 220/300 (73%), Gaps = 9/300 (3%) Strand=Plus/Plus Query 1496 AAAACTTATTTCCAGGTGCATGCTTATGAACGGTCGAACAGAGTATACAATTACGAACTG 1555 |||| | || |||||| ||||||||||| |||| || |||| || || ||| | Sbjct 10167015 AAAAATGATCACCAGGTTCATGCTTATGAGAGGTCAAATCGAGTTTATAACTACAGTTTA 10167074 Query 1556 GACCCATGTGGTCCAGTTTACATTGTGATTGGTGATGGAGGTAACCGTGAAAAGATGGCG 1615 || ||||||||||| ||||| || |||| ||||| ||||| || ||||||||||| Sbjct 10167075 GATCCATGTGGTCCTGTTTATATCACAGTTGGAGATGGGGGTAATCGAGAAAAGATGGCA 10167134 Query 1616 ATCGAGCATGCAGATGACCCCGGTAAATGTCCAGAGCCGTTAACCACGCCCGATCCAGTC 1675 ||| | |||| ||||| || || || |||| || || || || || || |||| | | Sbjct 10167135 ATCAAATATGCTGATGATCCTGGCAACTGTCTGGATCCATTGACTACTCCAGATCAATAC 10167194 Query 1676 ATGGGTGGGTTTTGCGCGTGGAACTTCAC-----GC----CGTCTGATAAGTTCTGTTGG 1726 |||||||| ||||| || || ||||| || | | | ||||||||||||| Sbjct 10167195 ATGGGTGGATTTTGTGCTACAAATTTCACATCTGGCCCAGCAGCGGGTAAGTTCTGTTGG 10167254 Query 1727 GATCGGCAACCTGATTATAGTGCCCTGAGAGAAAGCAGCTTTGGCCATGGAATCCTAGAG 1786 || |||||||| || || ||||| | |||||||| |||||||||||||| || |||||| Sbjct 10167255 GACCGGCAACCCGAATACAGTGCATTAAGAGAAAGTAGCTTTGGCCATGGTATTCTAGAG 10167314 Score = 123 bits (136), Expect = 5e-26 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 474 CAGGTGAGTTCCAAATCGGAAAGAAGGTGAAGCCATTAGATCCGACAAGTATCAACAGTG 533 ||||||| | ||||| || | | | ||||||||||| || | || | || ||| Sbjct 10163295 CAGGTGAATCACAAATTGGTTATGACATAAAGCCATTAGACCCTAAAACTGTCTCGAGTA 10163354 Query 534 TTGTTCAATTCGGAACCTTGAGGCACTCACTGAGTCATGAAGCTAAAGGACATTCACTTG 593 |||||| || |||| | || | |||||| |||||||| | |||| |||| |||| Sbjct 10163355 TTGTTCGCTTTGGAAAGATAAGATATCCACTGACACATGAAGCCACAGGATATTCTCTTG 10163414 Query 594 TTTATAGTCAACTTTATCCTTTCGACGGTCTCCTTAACTACACTTCTGGAATCATACACC 653 |||| | ||| ||||||||||| || ||||||| || ||||| || |||||||| || | Sbjct 10163415 TTTACAATCAGCTTTATCCTTTTGAAGGTCTCCAAAATTACACCTCCGGAATCATCCATC 10163474 Query 654 ATGTTCGCATTACAGG 669 ||||||| ||||||| Sbjct 10163475 ATGTTCGTCTTACAGG 10163490 Score = 114 bits (126), Expect = 3e-23 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 286 TATTCCGTCAACTTTAGATGGACCGTTCGTTCCGGTGACGGTGCCATTGGACACCTCTCT 345 ||||||||| ||| | || || ||||||| || ||||| ||||| || || | ||| Sbjct 10162504 TATTCCGTCGACTCTGGACGGCCCGTTCGAGCCCGTGACTGTGCCGTTCGATGCTAATCT 10162563 Query 346 CCGGGGGCAAGCCATCGATTTGCCCGACACCGATCCCCGCGTCCGCCGGCGTGTCATTGG 405 || || || | |||||||| ||| | |||||| | || | || || |||| || Sbjct 10162564 GCGTGGCGTCGCGGTGGATTTGCCGGACTCTGATCCCAGGGTTCAGCGCCGCGTCAAAGG 10162623 Query 406 TTTTGAGCCGGAGCAAAtctctctctccctctcctcCGATCATGATTCCATCTGGGTCTC 465 || ||||| ||||| || || ||||||||||| || || | || ||| ||||| |||| Sbjct 10162624 GTTCGAGCCAGAGCAGATTTCCGTCTCCCTCTCCGCCCATTACGACTCCGTCTGGATCTC 10162683 Query 466 TTGGATCACAGGT 478 |||||||||||| Sbjct 10162684 CTGGATCACAGGT 10162696 Score = 69.8 bits (76), Expect = 1e-09 Identities = 74/98 (76%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1785 AGATGAAGAACGAGACATGGGCACTATGGACATGGTATAGGAATCAAGACTCGAGCAGTG 1844 || ||||||| || || ||||| | ||||||||||| | ||||| || || |||| Sbjct 10168149 AGGTGAAGAATGAAACCTGGGCCTTGTGGACATGGTACCGAAATCAGGATTCTTACAGTC 10168208 Query 1845 AAGTCGGAGATCAGATTTATATTGTGAGACAACCTGAT 1882 |||| || ||||| || || || || || ||||||||| Sbjct 10168209 AAGTTGGGGATCAAATCTACATAGTAAGGCAACCTGAT 10168246 Score = 41.0 bits (44), Expect = 0.47 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 147 AACATTAAAAAATACAAAAAGCCGAAACCC 176 |||||| |||||||||||||| ||||||| Sbjct 1463693 AACATTCAAAAATACAAAAAGATGAAACCC 1463722 Score = 39.2 bits (42), Expect = 1.6 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 250 CTGCTTTCTCTCGCCGGCAATCTCCTCCGCCCACTC 285 |||| | ||||||| ||| ||||||||||| |||| Sbjct 20746092 CTGCCTCTTCTCGCCTGCAGTCTCCTCCGCCAACTC 20746057 Score = 37.4 bits (40), Expect = 5.7 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTTCCAGGTGCATGCTTA 1521 ||||| |||| ||||||||||| |||||| | |||| | |||| Sbjct 17121018 TTATGATTTTAATTTTGTGAAAA-TTATTTTGATGTGCTTTCTTA 17120975 Score = 37.4 bits (40), Expect = 5.7 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTTCCAGGTGCATGCTTA 1521 ||||| |||| ||||||||||| |||||| | |||| | |||| Sbjct 17129291 TTATGATTTTAATTTTGTGAAAA-TTATTTTGATGTGCTTTCTTA 17129248 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1077 AGAACAAGA--CATTTGAAGCTTATAGTT 1103 ||||||||| |||| ||||||||||||| Sbjct 33935269 AGAACAAGAGACATTAGAAGCTTATAGTT 33935241 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1077 AGAACAAG--ACATTTGAAGCTTATAGTT 1103 |||||||| ||||| ||||||||||||| Sbjct 33939207 AGAACAAGTGACATTAGAAGCTTATAGTT 33939179 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1077 AGAACAAGA--CATTTGAAGCTTATAGTT 1103 ||||||||| |||| ||||||||||||| Sbjct 33964865 AGAACAAGAGACATTAGAAGCTTATAGTT 33964837 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1077 AGAACAAGA--CATTTGAAGCTTATAGTT 1103 ||||||||| |||| ||||||||||||| Sbjct 33969125 AGAACAAGAGACATTAGAAGCTTATAGTT 33969097 >Query1 on lcl|Jm1D| Query1 on lcl|Jm1D Length=49856174 Score = 201 bits (222), Expect = 2e-49 Identities = 248/339 (73%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 666 CAGGGCTGAAACCAAGTACTATCTATTACTATCGATGTGGAGATCCTTCAAGACGGGCTA 725 ||||| ||||||| | || | ||| | |||| || ||||||||||| | || || | Sbjct 20903674 CAGGGTTGAAACCCAACACACTATATCAGTATCAGTGCGGAGATCCTTCTATACCAGCAA 20903615 Query 726 TGAGTAAGATACACCATTTCAGGACAATGCCTGTTTCTAGTCCCTCGAGTTATCCTGGTC 785 ||||| | || || |||||||||| ||||| |||||| | ||| |||||| || | Sbjct 20903614 TGAGTGAAGTATACTATTTCAGGACTATGCCAGTTTCTGGACCCAAGAGTTACCCCAGCA 20903555 Query 786 GAATAGCGGTTGTTGGTGATCTTGGTCTCACTTATAACACTACTGATACAATTAGTCACT 845 ||||||| || || || || |||||||| || || || || || ||| | | ||| Sbjct 20903554 GAATAGCAGTGGTGGGGGACCTTGGTCTTACATACAATACCACATCCACAGTCGGCCACC 20903495 Query 846 TGATTCATAACTCTCCGGATCTCATTTTATTGATCGGCGACGTGAGTTATGCAAACTTGT 905 |||| |||| || ||||| || || || |||| || || |||||||| ||| ||| Sbjct 20903494 TGATGAGTAACCACCCTGATCTTGTTCTACTGGTCGGGGATGTTAGTTATGCTAACCTGT 20903435 Query 906 ATCTAACAAACGGGACTAGCTCTGATTGTTATTCTTGCTCTTTCCCTGAGACACCTATAC 965 |||| ||||| || ||| | ||||||| || ||||| || || | | || || || | Sbjct 20903434 ATCTCACAAATGGAACTGGGACTGATTGCTACTCTTGTTCCTTTTCGCAAACTCCCATTC 20903375 Query 966 ATGAGACGTATCAGCCACGTTGGGACTACTGGGGTAGGT 1004 |||| || ||||||||||||||||| |||||||| |||| Sbjct 20903374 ATGAAACTTATCAGCCACGTTGGGATTACTGGGGAAGGT 20903336 Score = 172 bits (190), Expect = 1e-40 Identities = 211/288 (73%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 1508 CAGGTGCATGCTTATGAACGGTCGAACAGAGTATACAATTACGAACTGGACCCATGTGGT 1567 ||||| ||||| ||||| || | || |||| || || ||| | || || ||||||||| Sbjct 20901060 CAGGTTCATGCCTATGAGAGGACAAATCGAGTGTATAACTACAATCTAGATCCATGTGGT 20901001 Query 1568 CCAGTTTACATTGTGATTGGTGATGGAGGTAACCGTGAAAAGATGGCGATCGAGCATGCA 1627 | |||| ||| |||||||||| ||||| || || |||||||| || | ||||| Sbjct 20901000 GCCATTTATATTACAGTTGGTGATGGGGGTAATCGGGAGAAGATGGCAATTGTACATGCT 20900941 Query 1628 GATGACCCCGGTAAATGTCCAGAGCCGTTAACCACGCCCGATCCAGTCATGGGTGGGTTT 1687 ||||| | || || || ||||| || | || || || ||| | |||||||| || Sbjct 20900940 GATGAAGCTGGCAACTGCCCAGAACCATCTACGACACCAGATGAATATATGGGTGGATTC 20900881 Query 1688 TGCGCGTGGAACTTCAC-----GCCGT----CTGATAAGTTCTGTTGGGATCGGCAACCT 1738 || |||| || ||||| ||| | ||| ||||||||||||||| | ||| ||| Sbjct 20900880 TGTGCGTTCAATTTCACATCAGGCCCTGCAGCTGGTAAGTTCTGTTGGGACCAGCAGCCT 20900821 Query 1739 GATTATAGTGCCCTGAGAGAAAGCAGCTTTGGCCATGGAATCCTAGAG 1786 ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct 20900820 GATTATAGTGCGTACAGAGAAAGTAGCTTTGGCCATGGGATTCTAGAG 20900773 Score = 141 bits (156), Expect = 2e-31 Identities = 167/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 1001 AGGTTTATGGAGAATCTGACTTCCAAAGTTCCTTTGATGGTGATTGAAGGGAACCATGAG 1060 ||||| ||| || | | || || |||||||| | |||||| | |||||||||||||| Sbjct 20902345 AGGTTCATGCAGCCTATCACATCTAAAGTTCCCATAATGGTGGTAGAAGGGAACCATGAA 20902286 Query 1061 ATCGAATTGCAAGCAGAGAACAAGACATTTGAAGCTTATAGTTCAAGATTCGCTTTCCCT 1120 || ||| || || || || |||| |||| |||| ||||||||||| || ||||| Sbjct 20902285 ATAGAACAACAGGCTGAAAATCAGACTTTTGTTTCTTACAGTTCAAGATTTGCATTCCCA 20902226 Query 1121 TTTAATGAAAGCGGCTCGTCTTCTACGCTATATTATTCCTTTAACGCTGGTGGGATTCAC 1180 | | | || || || ||||| || || | || ||||| ||||| || ||||| || || Sbjct 20902225 TCTGAAGAGAGTGGATCGTCATCCACATTGTACTATTCTTTTAATGCAGGTGGCATACAT 20902166 Query 1181 TTTGTTATGCTTGGTGCCTACATTGCGTATGACAAATCAGCGGAAC 1226 ||| | |||||||||||||| | | ||||| ||||||| |||| Sbjct 20902165 TTTATCATGCTTGGTGCCTATGTATCCTATGATAAATCAGGTGAAC 20902120 Score = 134 bits (148), Expect = 3e-29 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1218 CAGCGGAACAATATGAATGGTTAAAGAAGGATTTGGCTAAAGTCGATAGATCGGTAACTC 1277 ||||||| ||||| || ||||| | | ||| | ||| || || ||| || |||| Sbjct 20901890 CAGCGGATCAATACGAGTGGTTGGAAAGGGACCTAGCTTTTGTTGACAGAGAAGTGACTC 20901831 Query 1278 CATGGTTAGTAGCTTCTTGGCATCCACCTTGGTATAGTTCTTATACAGCGCATTACAGAG 1337 ||||||| |||||| | ||||| ||||||||||| || | || | ||||||||||||| Sbjct 20901830 CATGGTTGGTAGCTGCATGGCACCCACCTTGGTACAGCACCTACAAGGCGCATTACAGAG 20901771 Query 1338 AAGCAGAATGTATGAAAGAAGCTATGGAGGAATTACTTTATTCTTATGGTACCGACATTG 1397 ||||||| || |||| | || ||||| || || || ||| |||||| ||| ||| Sbjct 20901770 AAGCAGAGTGCATGAGGGTAGAGATGGAAGACTTGCTGTATGAGTATGGTGTTGACGTTG 20901711 Query 1398 TCTTTAACGGACATGTAAG 1416 |||| || ||||||||||| Sbjct 20901710 TCTTCAATGGACATGTAAG 20901692 Score = 127 bits (140), Expect = 4e-27 Identities = 150/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 471 TCACAGGTGAGTTCCAAATCGGAAAGAAGGTGAAGCCATTAGATCCGACAAGTATCAACA 530 |||||||||| |||||||| || | || | | || ||||||| || ||| | Sbjct 20905334 TCACAGGTGAATTCCAAATTGGGGACAACATAACACCGCTAGATCCTGGAACTATAGCAA 20905275 Query 531 GTGTTGTTCAATTCGGAACCTTGAGGCACT--CACTGAGTCATGAAGCTAAAGGACATTC 588 |||||||||| | |||| | | | ||| || | | ||||||||| | || |||| Sbjct 20905274 GTGTTGTTCAGTATGGAATGT--ATGGACTGCCAATAACTCATGAAGCAACGGGCTATTC 20905217 Query 589 ACTTGTTTATAGTCAACTTTATCCTTTCGACGGTCTCCTTAACTACACTTCTGGAATCAT 648 ||| |||| | ||||||||||||||| || ||||| | ||||||||||||||||| || Sbjct 20905216 TCTTATTTACAATCAACTTTATCCTTTTGAAGGTCTTCAGAACTACACTTCTGGAATTAT 20905157 Query 649 ACACCATGTTCGCATTACAGG 669 ||||||||||||| | ||||| Sbjct 20905156 ACACCATGTTCGCCTCACAGG 20905136 Score = 75.2 bits (82), Expect = 2e-11 Identities = 159/235 (68%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 773 AGTTATCCTGGTCGAATAGCGGTTGTTGGTGATCTTGGTCTCACTTATAACACTACTGAT 832 |||||||| |||| ||||| ||| |||| ||| | |||||||| | || |||| Sbjct 17151616 AGTTATCCGAGTCGGATAGCAGTTATTGGAGATTTGGGTCTCACAAAAAATTCTACCACA 17151557 Query 833 ACAATTAGTCACTTGATTCATAACTCTCCGGATCTCATTTTATTGATCGGCGACGTGAGT 892 |||||| ||| |||||||| || ||| | |||||| || | || ||| | | | Sbjct 17151556 ACAATTGATCATTTGATTCAGAATGATCCTTCAATGATTTTAATGGTTGGAGACCTAACT 17151497 Query 893 TATGCAAACTTGTATCTAACAAACGG--GACTAGCT-CTGATTGTTATTCTTGCTCTTTC 949 |||||||| || | |||| || || || ||| || | || || | || Sbjct 17151496 TATGCAAATCAATACCGTACAACTGGTGGAAAAGGAGCTGCATGCTTCTCATGTGCATTT 17151437 Query 950 CCTGAGACACCTATACATGAGACGTATCAGCCACGTTGGGACTACTGGGGTAGGT 1004 ||||| ||||||| ||||||||||| || |||||||| ||||| |||| Sbjct 17151436 CCTGATGCACCTATCAGGGAGACGTATCAACCCCGTTGGGATGGGTGGGGAAGGT 17151382 Score = 71.6 bits (78), Expect = 3e-10 Identities = 129/189 (68%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 290 CCGTCAACTTTAGATGGACCGTTCGTTCCGGTGACGGTGCCATTGGACACCTCTCTCCGG 349 ||| |||| | |||||||| ||||| || || || || || | |||| |||| Sbjct 20906571 CCGACAACACTTGATGGACCCTTCGTGCCTGTCACTGTCCCTCTTGACAAAAGCTTCCGT 20906512 Query 350 GGGCAAGCCATCGATTTGCCCGACACCGATCCCCGCGTCCGCCGGCGTGTCATTGGTTTT 409 ||| | || | || ||||| | || |||||||| || | | ||| || ||| Sbjct 20906511 GGGAATGCTGTGGACTTGCCAGCTACAGATCCCCGAGTGCAAAGAATTGTTGAAGGGTTT 20906452 Query 410 GAGCCGGAGCAAAtctctctctccctctcctcCGATCATGATTCCATCTGGGTCTCTTGG 469 | ||| ||||||||||| | || ||||| | |||| || | |||||||||||| Sbjct 20906451 GCGCCTGAGCAAATCTCAGTATCACTCTCTGCAACGTATGACTCTGTATGGGTCTCTTGG 20906392 Query 470 ATCACAGGT 478 ||||||||| Sbjct 20906391 ATCACAGGT 20906383 Score = 68.0 bits (74), Expect = 3e-09 Identities = 106/149 (71%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 1269 CGGTAACTCCATGGTTAGTAGCTTCTTGGCATCCACCTTGGTATAGTTCTTATACAGCGC 1328 ||||||| || ||||| |||||| | ||||||||||||||||||| ||| | | | Sbjct 17033560 CGGTAACCCCCTGGTTGGTAGCTACATGGCATCCACCTTGGTATAACAACTATTCTTCAC 17033501 Query 1329 ATTA-CAGAGAAGCAGAATGTATGAAAGAAGCTATGGAGGAATTACTTTATTCTTATGGT 1387 |||| ||| ||| ||||| |||| | | | ||||| | | | || ||| ||| || Sbjct 17033500 ATTATCAG-GAATTTGAATGCATGAGACAGGAAATGGAAGCAATTCTGTATCAGTATAGT 17033442 Query 1388 ACCGACATTGTCTTTAACGGACATGTAAG 1416 ||| ||||| ||| || || ||||| Sbjct 17033441 GTCGATATTGTTTTTTTTGGTCACGTAAG 17033413 Score = 68.0 bits (74), Expect = 3e-09 Identities = 106/149 (71%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 1269 CGGTAACTCCATGGTTAGTAGCTTCTTGGCATCCACCTTGGTATAGTTCTTATACAGCGC 1328 ||||||| || ||| | |||||| | ||||||||||||||||||| ||| | | | Sbjct 17148710 CGGTAACCCCCTGGCTGGTAGCTGCATGGCATCCACCTTGGTATAACAGCTATTCTTCAC 17148651 Query 1329 ATTA-CAGAGAAGCAGAATGTATGAAAGAAGCTATGGAGGAATTACTTTATTCTTATGGT 1387 |||| ||| ||| ||||| |||| | | | ||||| | | | || ||| |||||| Sbjct 17148650 ATTATCAG-GAATTTGAATGCATGAGACAGGAAATGGAAGCAATTCTGTATCAGTATGGT 17148592 Query 1388 ACCGACATTGTCTTTAACGGACATGTAAG 1416 ||| ||||| ||| || || ||||| Sbjct 17148591 GTCGATATTGTTTTTTCTGGTCACGTAAG 17148563 Score = 64.4 bits (70), Expect = 4e-08 Identities = 58/73 (79%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1001 AGGTTTATGGAGAATCTGACTTCCAAAGTTCCTTTGATGGTGATTGAAGGGAACCATGAG 1060 || || |||||||| | || || | ||||||| ||||||| |||||||| ||||||||| Sbjct 17033930 AGATTCATGGAGAAGTTAACCTCAAGAGTTCCTATGATGGTCATTGAAGGCAACCATGAG 17033871 Query 1061 ATCGAATTGCAAG 1073 || || | |||| Sbjct 17033870 ATTGAGCTTCAAG 17033858 Score = 64.4 bits (70), Expect = 4e-08 Identities = 53/65 (82%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1001 AGGTTTATGGAGAATCTGACTTCCAAAGTTCCTTTGATGGTGATTGAAGGGAACCATGAG 1060 || || |||||||| | || || | ||||||| ||||||| |||||||| ||||||||| Sbjct 17149084 AGATTCATGGAGAAGTTAACCTCAAGAGTTCCTATGATGGTCATTGAAGGCAACCATGAG 17149025 Query 1061 ATCGA 1065 || || Sbjct 17149024 ATTGA 17149020 Score = 55.4 bits (60), Expect = 2e-05 Identities = 100/144 (69%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 1505 TTCCAGGTGCATGCTTATGAACGGTCGAACAGAGTATACAATTACGAACTGGACCCATGT 1564 || ||||||||||||||||| || ||| ||||| || || || | | || ||||| Sbjct 17147802 TTGCAGGTGCATGCTTATGAGCGCATGAATAGAGTTTATAACTATACATTAGATTCATGT 17147743 Query 1565 GGTCCAGTTTACATTGTGATTGGTGATGGAGGTAACCGTGA-AAAGATGGCGATCGAGCA 1623 || || || ||| | |||| ||||| || || ||| |||| || | |||| Sbjct 17147742 GGACCTGTCTACTTAACAGTTGGAGATGGTGGAAATATTGAGAAAGTTGATG-TCGATTT 17147684 Query 1624 TGCAGATGACCCCGGTAAATGTCC 1647 ||||||||||| || || || || Sbjct 17147683 CGCAGATGACCCTGGAAAGTGCCC 17147660 Score = 51.8 bits (56), Expect = 3e-04 Identities = 54/71 (76%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 1716 AGTTCTGTTGGGATCGGCAACCTGATTATAGTGCCCTGAGAGAAAGCAGCTTTGGCCATG 1775 |||| |||||| | ||||| || | ||||| ||||||||||||||||| |||| Sbjct 17147585 AGTTTTGTTGGAACAAACAACCAGAGTGGAGTGCATACAGAGAAAGCAGCTTTGGGCATG 17147526 Query 1776 GAATCCTAGAG 1786 |||| || ||| Sbjct 17147525 GAATACTTGAG 17147515 Score = 39.2 bits (42), Expect = 1.6 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 189 GAAAAGCTCCGCCACCACCACCAC 212 ||||| |||||||||||||||||| Sbjct 45455872 GAAAACCTCCGCCACCACCACCAC 45455895 Score = 37.4 bits (40), Expect = 5.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1482 TTTTTTCTTTTGTGAAAACTTATTT 1506 || ||||||||||||||| |||||| Sbjct 37281624 TTATTTCTTTTGTGAAAAGTTATTT 37281648 >Query1 on lcl|Jm6S| Query1 on lcl|Jm6S Length=22373256 Score = 41.0 bits (44), Expect = 0.47 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Minus Query 83 TGATTAGTT-TAACGATAATGACTATTTA 110 |||||| || ||||||||||||||||||| Sbjct 17291103 TGATTATTTGTAACGATAATGACTATTTA 17291075 Score = 37.4 bits (40), Expect = 5.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACT 1501 ||| ||||||| ||||||||||||| Sbjct 5106909 TTACGTTTTTTGTTTTGTGAAAACT 5106885 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1053 ACCATGAGATCGAATTGCAAGCAGAGAA 1080 ||||||||||| ||||||| ||||||| Sbjct 21628531 ACCATGAGATCAGATTGCAACCAGAGAA 21628504 >Query1 on lcl|Jm6D| Query1 on lcl|Jm6D Length=38364907 Score = 41.0 bits (44), Expect = 0.47 Identities = 39/49 (80%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 1460 TTTGATATGATGG-ACCGTTATGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||| | ||| || ||||||||||||||| ||||||| Sbjct 5170581 TTTGATATGATACTAATGTTTTGACTTTTCTTTTGTGAAATTTTATTTC 5170533 Score = 39.2 bits (42), Expect = 1.6 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 84 GATTAGTT-TAACGATAATGACTATTTA 110 ||||| || ||||||||||||||||||| Sbjct 2481677 GATTATTTGTAACGATAATGACTATTTA 2481704 Score = 39.2 bits (42), Expect = 1.6 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 1086 CATTTGAAGCTTATAGTTCAAGATTCGCTTT 1116 |||||||||||| ||||| |||||| | ||| Sbjct 10997355 CATTTGAAGCTTCTAGTTTAAGATTGGATTT 10997325 Score = 39.2 bits (42), Expect = 1.6 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1475 CGTTATGTTTTTTCTTTTGTGAAAAC 1500 |||| |||||||| |||||||||||| Sbjct 13816057 CGTTTTGTTTTTTTTTTTGTGAAAAC 13816082 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Plus Query 1077 AGAACAAGA--CATTTGAAGCTTATAGTT 1103 ||||||||| |||| ||||||||||||| Sbjct 5217373 AGAACAAGAGACATTAGAAGCTTATAGTT 5217401 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 20135189 TGTTTTTTCTTTTGTGATATTTTATTTC 20135216 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1479 ATGTTTTTTCTTTTGTGAAAACTTATTT 1506 || || |||||||||||| ||||||||| Sbjct 36095551 ATTTTATTTCTTTTGTGACAACTTATTT 36095524 >Query1 on lcl|Jm1S| Query1 on lcl|Jm1S Length=30169828 Score = 41.0 bits (44), Expect = 0.47 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTT 1506 |||||||||||||||| | |||| |||||| Sbjct 24829744 TTATGTTTTTTCTTTTTTAAAAAATTATTT 24829715 Score = 37.4 bits (40), Expect = 5.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1664 CCCGATCCAGTCATGGGTGGGTTTT 1688 |||||||||||| |||||||| ||| Sbjct 22487449 CCCGATCCAGTCTTGGGTGGGGTTT 22487425 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1053 ACCATGAGATCGAATTGCAAGCAGAGAA 1080 ||||||||||| ||||||| ||||||| Sbjct 27641663 ACCATGAGATCAGATTGCAACCAGAGAA 27641636 >Query1 on lcl|Jm8D| Query1 on lcl|Jm8D Length=36225362 Score = 39.2 bits (42), Expect = 1.6 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1674 TCATGGGTGGGTTTTGCGCGTGGA 1697 ||||||||||||||||| |||||| Sbjct 6389825 TCATGGGTGGGTTTTGCTCGTGGA 6389802 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1074 CAGAGAACAAGACATTTGAAGCTTATAG 1101 ||||||| | || ||||||||||||||| Sbjct 20360725 CAGAGAAAATGAAATTTGAAGCTTATAG 20360752 Score = 37.4 bits (40), Expect = 5.7 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTTCCAGGTGCATGCTTA 1521 ||||| |||| ||||||||||| |||||| | |||| | |||| Sbjct 24584296 TTATGATTTTAATTTTGTGAAAA-TTATTTTGATGTGCTTTCTTA 24584339 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 24973594 TGTTTTTTCTTTTGTGATATTTTATTTC 24973567 Score = 37.4 bits (40), Expect = 5.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1086 CATTTGAAGCTTATAGTTCAAGATT 1110 |||||||||||| ||||| |||||| Sbjct 28248008 CATTTGAAGCTTCTAGTTTAAGATT 28248032 >Query1 on lcl|Jm7D| Query1 on lcl|Jm7D Length=26765518 Score = 39.2 bits (42), Expect = 1.6 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 7 TATAAAATTCTTTAGTAATAATTATT 32 ||||||||||||| ||||| |||||| Sbjct 7270054 TATAAAATTCTTTTGTAATTATTATT 7270029 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 20626331 TGTTTTTTCTTTTGTGATATTTTATTTC 20626304 >Query1 on lcl|Jm8S| Query1 on lcl|Jm8S Length=19962766 Score = 37.4 bits (40), Expect = 5.7 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 925 CTCTGATTGTTATTCTTGCTCTTTCCCTGAGACACCTATACATGA 969 |||||| | |||||| ||||||||||| ||| | ||| | ||| Sbjct 3083145 CTCTGAATTCGATTCTTTCTCTTTCCCTGTGACTCTTATTCTTGA 3083189 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 5113153 TGTTTTTTCTTTTGTGATATTTTATTTC 5113126 Score = 37.4 bits (40), Expect = 5.7 Identities = 34/43 (79%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 7 TATAAAATTCTTTAGTAATAATTATTAGGTCTTAAGAAATACA 49 |||| || || | |||||| | | || ||||||||||||||| Sbjct 7661914 TATAGTATGCTATTGTAATACTCAGTACGTCTTAAGAAATACA 7661956 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 16272873 TGTTTTTTCTTTTGTGATATTTTATTTC 16272900 >Query1 on lcl|Jm7S| Query1 on lcl|Jm7S Length=21889424 Score = 37.4 bits (40), Expect = 5.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1475 CGTTATGTTTTTTCTTTTGTGAA 1497 ||||| ||||||||||||||||| Sbjct 1845661 CGTTACGTTTTTTCTTTTGTGAA 1845683 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 4579449 TGTTTTTTCTTTTGTGATATTTTATTTC 4579422 >Query1 on lcl|Jm5S| Query1 on lcl|Jm5S Length=32113326 Score = 37.4 bits (40), Expect = 5.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1160 TTTAACGCTGGTGGGATTCACTT 1182 |||||| |||||||||||||||| Sbjct 8746628 TTTAACACTGGTGGGATTCACTT 8746606 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 14176646 TGTTTTTTCTTTTGTGATATTTTATTTC 14176619 >Query1 on lcl|Jm5D| Query1 on lcl|Jm5D Length=35798223 Score = 37.4 bits (40), Expect = 5.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1031 CCTTTGATGGTGATTGAAGGGAACCATGAGATCGA 1065 |||| |||||||| |||| ||||||||||| || Sbjct 1186654 CCTTGGATGGTGACGCAAGGCAACCATGAGATTGA 1186688 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 23667028 TGTTTTTTCTTTTGTGATATTTTATTTC 23667001 >Query1 on lcl|Jm4S| Query1 on lcl|Jm4S Length=27577207 Score = 37.4 bits (40), Expect = 5.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1480 TGTTTTTTCTTTTGTGAAAACTT 1502 |||||||||||||||||||| || Sbjct 6480614 TGTTTTTTCTTTTGTGAAAATTT 6480592 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1480 TGTTTTTTCTTTTGTGAAAACTTATTTC 1507 ||||||||||||||||| | ||||||| Sbjct 19491640 TGTTTTTTCTTTTGTGATATTTTATTTC 19491667 Score = 37.4 bits (40), Expect = 5.7 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 84 GATTAGTT-TAACGATAATGACTATTT 109 ||||| || |||||||||||||||||| Sbjct 22489149 GATTATTTATAACGATAATGACTATTT 22489123 >Query1 on lcl|Jm4D| Query1 on lcl|Jm4D Length=35629462 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 851 CATAACTCTCCGGATCTCATTTTATTGATC 880 ||||| | || |||| |||||||||||||| Sbjct 22026486 CATAAATATCTGGATTTCATTTTATTGATC 22026457 Score = 37.4 bits (40), Expect = 5.7 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 936 ATTCTTGCTCTTTCCCTGAG 955 |||||||||||||||||||| Sbjct 34347947 ATTCTTGCTCTTTCCCTGAG 34347966 >Query1 on lcl|Jm3D| Query1 on lcl|Jm3D Length=39900371 Score = 37.4 bits (40), Expect = 5.7 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTTCCAGGTGCATGCTTA 1521 ||||| |||| ||||||||||| |||||| | |||| | |||| Sbjct 19353408 TTATGATTTTAATTTTGTGAAAA-TTATTTTGATGTGCTTTCTTA 19353365 Score = 37.4 bits (40), Expect = 5.7 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1477 TTATGTTTTTTCTTTTGTGAAAACTTATTTCCAGGTGCATGCTTA 1521 ||||| |||| ||||||||||| |||||| | |||| | |||| Sbjct 19359279 TTATGATTTTAATTTTGTGAAAA-TTATTTTGATGTGCTTTCTTA 19359236 Score = 37.4 bits (40), Expect = 5.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1454 TTTCGATTTGATATGATGGACCGTTATGTT 1483 ||||| |||||||||||| | |||||||| Sbjct 26698846 TTTCGTTTTGATATGATGTTCAGTTATGTT 26698817 Score = 37.4 bits (40), Expect = 5.7 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Plus Query 194 GCTCCGCCACC-ACCACCACCCTCT 217 ||||||||||| ||||||||||||| Sbjct 27746055 GCTCCGCCACCCACCACCACCCTCT 27746079 Score = 37.4 bits (40), Expect = 5.7 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1168 TGGTGGGATTCACTTTGTTA 1187 |||||||||||||||||||| Sbjct 38310793 TGGTGGGATTCACTTTGTTA 38310812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997185775981 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2