BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=1698 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr2D 358 1e-96 lcl|Jr2S 316 4e-84 lcl|Jr6D 309 5e-82 lcl|Jr3S 73.4 7e-11 lcl|Jr7S 46.4 0.010 lcl|Jr3D 46.4 0.010 lcl|Jr8D 42.8 0.12 lcl|Jr4S 42.8 0.12 lcl|Jr1D 42.8 0.12 lcl|Jr8S 41.0 0.42 lcl|Jr7D 41.0 0.42 lcl|Jr1S 41.0 0.42 lcl|Jr5S 39.2 1.5 lcl|Jr5D 39.2 1.5 lcl|Jr4D 39.2 1.5 lcl|Jr6S 37.4 5.1 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 358 bits (396), Expect = 1e-96 Identities = 293/356 (82%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 473 CAGATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGAAAGAG 532 |||||||| || || |||||||| |||||||| ||||| |||||| | |||||||| || Sbjct 316875 CAGATTGACCCTGCAAAGTACAAAAGCATCTCATCTGGGTTTGGAGTGTTGCTGAAGGAT 316934 Query 533 CAAGGAGTCAAAGGCTTTTTCCGTGGATGGGTTCCTACTCTTTTGGGTTACAGTGCTCAG 592 || || |||| |||||| ||| | || ||||| || || | | || |||||||||||| Sbjct 316935 CAGGGCGTCAGAGGCTTCTTCAGGGGTTGGGTACCAACCTTGCTTGGCTACAGTGCTCAG 316994 Query 593 GGTGCCTGCAAGTTTGGATTCTACGAGTACTTTAAGAAGACTTACTCTGACCTTGCTGGA 652 ||||| |||||||||||||||||||| | |||||||||| ||||||||| |||||||| Sbjct 316995 GGTGCTTGCAAGTTTGGATTCTACGAATTCTTTAAGAAGTACTACTCTGACATTGCTGGA 317054 Query 653 CCTGAGTACACTGCCAAATACAAGACTCTCATCTACCTTGCTGGTTCTGCTTCTGCTGAG 712 |||||||| | |||| |||||||| | ||||| |||||||||||||| ||||||||| Sbjct 317055 CCTGAGTATGCATCCAAGTACAAGACCTTGATCTATCTTGCTGGTTCTGCATCTGCTGAG 317114 Query 713 ATCATTGCCGATATTGCACTTTGCCCATTTGAAGCTGTGAAGGTTCGTGTTCAGACACAG 772 ||||||| ||||||||||||||||| || || || |||||||| || ||||| |||||| Sbjct 317115 GTCATTGCAGATATTGCACTTTGCCCTTTCGAGGCAGTGAAGGTCCGAGTTCAAACACAG 317174 Query 773 CCTGGATTTGCTAGGGGGATGTCTGATGGATTTCCCAAGTTTATCAAGTCCGAAGG 828 ||||| |||||||| || | |||||||| |||| |||||| | || || ||||| Sbjct 317175 CCTGGTTTTGCTAGAGGTCTTTCTGATGGGCTTCCTAAGTTTGTTAAATCTGAAGG 317230 Score = 179 bits (198), Expect = 7e-43 Identities = 168/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 884 ACTATGATGAAGTTTGCTTCCTTTGAGACCATTGTTGAGATGATTTACAAGTACGCAATC 943 || |||||||||||||| || |||||| ||||||| |||| ||||| ||||| || ||| Sbjct 318622 ACAATGATGAAGTTTGCATCTTTTGAGGCCATTGTGGAGAATATTTATAAGTATGCCATC 318681 Query 944 CCCAACCCAAAGAGTGAGTGCAGCAAAGGTCTGCAACTCGGAGTGAGTTTTGCCGGAGGT 1003 |||| || ||| |||| || ||| ||||||| || || ||||||||||| || || Sbjct 318682 CCCACTCCGAAGGACCAGTGTAGTAAAAGTCTGCAGCTGGGTGTGAGTTTTGCTGGTGGA 318741 Query 1004 TACGTTGCCGGAGTGTTCTGTGCCATCGTTTCTCATCCAGCAGACAATCTAGTGTCATTC 1063 || || || || | |||||||| || || |||||||| || |||||||| || || ||| Sbjct 318742 TATGTGGCTGGTATATTCTGTGCTATTGTGTCTCATCCTGCTGACAATCTTGTCTCTTTC 318801 Query 1064 CTCAACAACGCTAAGGGAGCAACCGTTGGAGATG 1097 |||||||| || || || ||||| ||||| |||| Sbjct 318802 CTCAACAATGCCAAAGGGGCAACTGTTGGTGATG 318835 Score = 122 bits (134), Expect = 2e-25 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 361 GATCGAGATGTATTCACCTGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTG 420 |||||||||||| || || |||||||| || |||||| | || || || |||||||| Sbjct 314836 GATCGAGATGTACTCCCCACAATTCTACGCCGCCTGTACCGTCGGAGGCATCCTCAGCTG 314895 Query 421 TGGTCTTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG 475 |||||| ||||||||| |||| ||||| ||||| |||||||| |||||||||||| Sbjct 314896 TGGTCTCACTCACATGGCCGTCACTCCCCTCGACCTCGTCAAATGCAATATGCAG 314950 Score = 86.0 bits (94), Expect = 1e-14 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1097 GCGGTGAAGAAGATTGGTATGGTGGGACTGTTCACAAGAGGGCTTCCTCTTAGAATTGTG 1156 || ||||||||| | ||| || ||| || || || | ||||||||||| | ||||| Sbjct 318918 GCTGTGAAGAAGCTAGGTTTGTGGGGTCTCTTTACCCGTGGGCTTCCTCTCCGTATTGTC 318977 Query 1157 ATGATCGGGACGTTGACTGGAGCACAGTGGGGATTATACGATGCCTTCAAAGTGTTTGTT 1216 ||||| || || | || ||||| ||||||||| | || || ||||||||||| || || Sbjct 318978 ATGATTGGAACTCTTACCGGAGCTCAGTGGGGAATCTATGACGCCTTCAAAGTTTTCGTG 319037 Query 1217 GG 1218 || Sbjct 319038 GG 319039 Score = 55.4 bits (60), Expect = 2e-05 Identities = 36/40 (90%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 840 TGTATAAGGGTCTTGCTCCACTCTGGGGACGTCAGATTCC 879 |||| |||||||| | ||| |||||||||||||||||||| Sbjct 317333 TGTACAAGGGTCTAGTTCCTCTCTGGGGACGTCAGATTCC 317372 Score = 39.2 bits (42), Expect = 1.5 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1617 TCTATCTATTATTTTACTTTTTTGTTTTAGAGATTATATAAAAT 1660 ||||||| || | || |||||| |||| | |||||||||||| Sbjct 9661612 TCTATCTCTTCTGTTTTTTTTTTTTTTTTGCAATTATATAAAAT 9661569 Score = 39.2 bits (42), Expect = 1.5 Identities = 31/37 (84%), Gaps = 3/37 (8%) Strand=Plus/Plus Query 1649 ATTATATAAAATCTCGTTTTAAAACATCAAATCATAG 1685 ||||||||||||| || ||||| |||||| ||||| Sbjct 11876474 ATTATATAAAATC---TTATAAAAAATCAAAGCATAG 11876507 Score = 39.2 bits (42), Expect = 1.5 Identities = 31/37 (84%), Gaps = 3/37 (8%) Strand=Plus/Plus Query 1649 ATTATATAAAATCTCGTTTTAAAACATCAAATCATAG 1685 ||||||||||||| || ||||| |||||| ||||| Sbjct 11911035 ATTATATAAAATC---TTATAAAAAATCAAAGCATAG 11911068 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 173 TCTCTGATCCCGAGCTTCCTCTATTCATCATCT 205 ||||||||||| || |||||||| || || ||| Sbjct 314679 TCTCTGATCCCCAGTTTCCTCTACTCTTCTTCT 314711 Score = 37.4 bits (40), Expect = 5.1 Identities = 37/48 (77%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 1222 GCCAACCACTGGTGGTGTTGCTCCAGCTCCTGCCATCGCAGCTACTGA 1269 |||||||||||| || | |||| ||| ||| || ||| || ||||| Sbjct 319138 GCCAACCACTGGCGGGATCACTCCTGCTGCTGTCACCGCTGCAACTGA 319185 Score = 37.4 bits (40), Expect = 5.1 Identities = 44/59 (75%), Gaps = 3/59 (5%) Strand=Plus/Minus Query 1629 TTTACTTTTTTGTTTTAGAGATTATATAAAA---TCTCGTTTTAAAACATCAAATCATA 1684 ||||||||||| ||||| | | |||| | || | | ||||||||| ||||| ||| Sbjct 6115230 TTTACTTTTTTTTTTTAAATAATATACAGAACTTACGCATTTTAAAACTACAAATAATA 6115172 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1274 AAAGCCTAAACAATGACGAAAAAGGTTATTAGGAG 1308 |||| || || |||| | |||||||||||| |||| Sbjct 10333838 AAAGTCTCAAAAATGTCTAAAAAGGTTATTGGGAG 10333872 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1324 TTTTTGTTTGGAAAAATAAGAGAAA 1348 ||||| ||| ||||||||||||||| Sbjct 15114048 TTTTTCTTTTGAAAAATAAGAGAAA 15114024 Score = 37.4 bits (40), Expect = 5.1 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 1468 ATACTCTCTTCCTATTGTTTCTTGTCCtttttttCTTT 1505 || |||||||||||||| | ||| | ||| ||||||| Sbjct 15116188 ATTCTCTCTTCCTATTGCTACTTCTTTTTTCTTTCTTT 15116151 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 21149538 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 21149570 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1624 ATTATTTTACTTTTTTGTTTTAGAGATTATATAAA 1658 ||| |||| |||||| |||| | ||||||||||| Sbjct 22684405 ATTTTTTTTTTTTTTTTTTTTTGGGATTATATAAA 22684439 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1568 CCACTCACTACTTTTTATTCAGTTTCAGTT 1597 |||||| |||||||||||| | ||| |||| Sbjct 24830222 CCACTCCCTACTTTTTATTTAATTTTAGTT 24830251 Score = 37.4 bits (40), Expect = 5.1 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1409 ttttgttttttttGAAATTTGTGTTCCT 1436 |||| ||| |||||||||||||||| || Sbjct 35522163 TTTTTTTTATTTTGAAATTTGTGTTGCT 35522190 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1408 tttttgttttttttGAAATTTGTGT 1432 ||||| ||||||| ||||||||||| Sbjct 43024739 TTTTTATTTTTTTAGAAATTTGTGT 43024715 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 316 bits (350), Expect = 4e-84 Identities = 289/365 (79%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 473 CAGATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGAAAGAG 532 |||||||| || || | |||||| | ||||| |||||||||||| | ||||||| ||| Sbjct 234581 CAGATTGACCCTGCAAGGTACAAAACGATCTCATCTGGTTTTGGAGTGCTGCTGAAGGAG 234640 Query 533 CAAGGAGTCAAAGGCTTTTTCCGTGGATGGGTTCCTACTCTTTTGGGTTACAGTGCTCAG 592 || || ||| |||||| ||| | || ||||| || || | | ||||||||||||||| Sbjct 234641 CAGGGCATCAGAGGCTTCTTCAGGGGTTGGGTGCCAACCTTGCTTGGTTACAGTGCTCAG 234700 Query 593 GGTGCCTGCAAGTTTGGATTCTACGAGTACTTTAAGAAGACTTACTCTGACCTTGCTGGA 652 ||||| |||||||||||||||| || | ||||||||| ||||||||| |||||||| Sbjct 234701 GGTGCTGGCAAGTTTGGATTCTATGAATTCTTTAAGAAATACTACTCTGACATTGCTGGA 234760 Query 653 CCTGAGTACACTGCCAAATACAAGACTCTCATCTACCTTGCTGGTTCTGCTTCTGCTGAG 712 |||||||| | |||| ||||| || | ||||| |||||||||||||| || |||||| Sbjct 234761 CCTGAGTATGCAACCAAGTACAAAACCTTGATCTATCTTGCTGGTTCTGCATCCGCTGAG 234820 Query 713 ATCATTGCCGATATTGCACTTTGCCCATTTGAAGCTGTGAAGGTTCGTGTTCAGACACAG 772 ||||||| || ||||| |||||||| ||||| || |||||||| || ||||| || ||| Sbjct 234821 GTCATTGCGGACATTGCTCTTTGCCCTTTTGAGGCAGTGAAGGTCCGAGTTCAAACTCAG 234880 Query 773 CCTGGATTTGCTAGGGGGATGTCTGATGGATTTCCCAAGTTTATCAAGTCCGAAGGATAC 832 ||||| ||||| || || | || ||||| |||| |||||| | ||||| ||||| || Sbjct 234881 CCTGGTTTTGCCAGAGGTCTTTCAGATGGGCTTCCTAAGTTTGTTAAGTCGGAAGGCTAT 234940 Query 833 GGAGG 837 | ||| Sbjct 234941 GCAGG 234945 Score = 170 bits (188), Expect = 3e-40 Identities = 166/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 884 ACTATGATGAAGTTTGCTTCCTTTGAGACCATTGTTGAGATGATTTACAAGTACGCAATC 943 || |||||||||||||| || |||||||||||||| || ||||| ||||| || ||| Sbjct 235741 ACAATGATGAAGTTTGCATCTTTTGAGACCATTGTGGAATATATTTATAAGTATGCCATC 235800 Query 944 CCCAACCCAAAGAGTGAGTGCAGCAAAGGTCTGCAACTCGGAGTGAGTTTTGCCGGAGGT 1003 |||| | ||| |||| || ||| |||||| || || ||||||||||| || || Sbjct 235801 CCCACATCGAAGGACCAGTGTAGTAAATCTCTGCAGCTTGGTGTGAGTTTTGCTGGTGGA 235860 Query 1004 TACGTTGCCGGAGTGTTCTGTGCCATCGTTTCTCATCCAGCAGACAATCTAGTGTCATTC 1063 || || || || ||||| ||||| || || |||||||| || |||||||| || || ||| Sbjct 235861 TATGTGGCTGGCGTGTTTTGTGCTATAGTGTCTCATCCTGCTGACAATCTTGTCTCTTTC 235920 Query 1064 CTCAACAACGCTAAGGGAGCAACCGTTGGAGATG 1097 |||||||| || || || ||||| ||||| |||| Sbjct 235921 CTCAACAATGCCAAAGGGGCAACTGTTGGTGATG 235954 Score = 125 bits (138), Expect = 1e-26 Identities = 122/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 319 GAAGAATTTCCTTATTGCATCTCCCACCGAGCCAGGGAAGGGGATCGAGATGTATTCACC 378 || ||| || || || | || || ||||||| ||| ||||||||||||||| || Sbjct 233180 GAGGAACGTCTTTGTTCCTTCCCCTTCCGAGCCTACCAAGAAGATCGAGATGTATTCCCC 233239 Query 379 TGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTGTGGTCTTACTCACATGAC 438 |||||||| || |||||||| || || || |||||||| ||||| ||||||||| | Sbjct 233240 ACAATTCTACGCCGCCTGTACCTTCGGCGGCATCCTCAGCTGCGGTCTCACTCACATGGC 233299 Query 439 CGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG 475 ||| ||||| |||||||| ||||| || ||||||||| Sbjct 233300 CGTCACTCCCCTCGATCTTGTCAAATGTAATATGCAG 233336 Score = 89.7 bits (98), Expect = 9e-16 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1097 GCGGTGAAGAAGATTGGTATGGTGGGACTGTTCACAAGAGGGCTTCCTCTTAGAATTGTG 1156 || ||||||||| | ||| || ||| || || || | ||||||||||| | || || Sbjct 236039 GCTGTGAAGAAGCTAGGTTTGTGGGGTCTCTTTACTCGTGGGCTTCCTCTCCGTATCGTC 236098 Query 1157 ATGATCGGGACGTTGACTGGAGCACAGTGGGGATTATACGATGCCTTCAAAGTGTTTGTT 1216 ||||| || || | |||||||| ||||||||| | || |||||||||||||| || || Sbjct 236099 ATGATTGGAACTCTTACTGGAGCTCAGTGGGGAATCTATGATGCCTTCAAAGTTTTCGTG 236158 Query 1217 GG 1218 || Sbjct 236159 GG 236160 Score = 51.8 bits (56), Expect = 2e-04 Identities = 37/43 (86%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 839 TTGTATAAGGGTCTTGCTCCACTCTGGGGACGTCAGATTCCTT 881 || || ||||| || | ||| |||||||||||||||||||||| Sbjct 235031 TTATACAAGGGACTAGTTCCTCTCTGGGGACGTCAGATTCCTT 235073 Score = 46.4 bits (50), Expect = 0.010 Identities = 41/51 (80%), Gaps = 3/51 (6%) Strand=Plus/Plus Query 1222 GCCAACCACTGGTGGTGTTGCTCCAGCTCCTG---CCATCGCAGCTACTGA 1269 |||||||||||||||||| |||| ||| ||| | | ||| |||||||| Sbjct 236259 GCCAACCACTGGTGGTGTAACTCCTGCTGCTGCTACTACCGCTGCTACTGA 236309 Score = 44.6 bits (48), Expect = 0.034 Identities = 27/29 (93%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 173 TCTCTGATCCCGAGCTTCCTCTATTCATC 201 ||||||||||||||||||||||| || || Sbjct 233067 TCTCTGATCCCGAGCTTCCTCTACTCTTC 233095 Score = 42.8 bits (46), Expect = 0.12 Identities = 36/44 (82%), Gaps = 4/44 (9%) Strand=Plus/Plus Query 1602 TTCTCTTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTTA 1645 |||||||||| || ||| | ||||||||||||| ||||||| Sbjct 26651853 TTCTCTTTTGTTT----TATTTTTTATTTTACTTTTGTGTTTTA 26651892 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 1408 tttttgttttttttGAAATTTGTGTTCCTGAATT 1441 || ||| ||||| ||||||||||||| |||| || Sbjct 16948643 TTGTTGATTTTTCTGAAATTTGTGTTGCTGATTT 16948610 Score = 39.2 bits (42), Expect = 1.5 Identities = 35/43 (81%), Gaps = 1/43 (2%) Strand=Plus/Plus Query 1634 TTTTTTGTTTTAGAGATTATATA-AAATCTCGTTTTAAAACAT 1675 |||||||||||||| | ||| | ||| || ||| |||||||| Sbjct 17749700 TTTTTTGTTTTAGAATTCATAAACAAAACTTGTTATAAAACAT 17749742 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 197 TCATCATCTTCATCTCCGAGATCTTTCCTC 226 |||||||||||||| || || ||||||||| Sbjct 1101785 TCATCATCTTCATC-CCCAGCTCTTTCCTC 1101757 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1483 TGTTTCTTGTCCtttttttCTTTGT 1507 ||||||||||| |||||||||| || Sbjct 1595834 TGTTTCTTGTCATTTTTTTCTTAGT 1595810 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1616 CTCTATCTATTATTTTACTTTTTTGTTTT 1644 |||| ||||||||||| ||||||||||| Sbjct 9431041 CTCTTTCTATTATTTT--TTTTTTGTTTT 9431015 Score = 37.4 bits (40), Expect = 5.1 Identities = 43/56 (77%), Gaps = 4/56 (7%) Strand=Plus/Minus Query 1626 TATTTTACTTTTTTGTTTTAGAGAT-TAT---ATAAAATCTCGTTTTAAAACATCA 1677 |||||||||||||| ||||| | || ||| |||| || | | ||| ||||||| Sbjct 17034167 TATTTTACTTTTTTTTTTTATATATATATTTAATAATATATTGGTTTGTAACATCA 17034112 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 50 ATTGGTGC--TTTTGGTTTTGGCAAAGCGTGAGTGAGAT 86 ||||| || ||||||||||||| ||| ||| |||||| Sbjct 27120065 ATTGGAGCATTTTTGGTTTTGGCTAAGAGTGCATGAGAT 27120103 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 50 ATTGGTGC--TTTTGGTTTTGGCAAAGCGTGAGTGAGAT 86 ||||| || ||||||||||||| ||| ||| |||||| Sbjct 27836949 ATTGGAGCATTTTTGGTTTTGGCTAAGAGTGCATGAGAT 27836987 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 309 bits (342), Expect = 5e-82 Identities = 284/359 (79%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 471 TGCAGATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGAAAG 530 |||||||||| ||||| || || ||||||||||||||||| ||||| |||||||| || | Sbjct 333193 TGCAGATTGACCCAGCTAAATATAAGAGCATCTCGTCTGGATTTGGCATTTTGCTCAAGG 333252 Query 531 AGCAAGGAGTCAAAGGCTTTTTCCGTGGATGGGTTCCTACTCTTTTGGGTTACAGTGCTC 590 |||| ||||| | ||| || ||| || ||||| || ||| || | ||||||||||| | Sbjct 333253 AGCAGGGAGTTAGAGGTTTCTTCAAGGGTTGGGTGCCCACTTTTCTAGGTTACAGTGCGC 333312 Query 591 AGGGTGCCTGCAAGTTTGGATTCTACGAGTACTTTAAGAAGACTTACTCTGACCTTGCTG 650 |||| |||||||| | |||| | ||||||| ||||||||| ||||| ||| |||| | Sbjct 333313 AGGGCGCCTGCAAATATGGACTTTACGAGTTTTTTAAGAAGTACTACTCGGACATTGCCG 333372 Query 651 GACCTGAGTACACTGCCAAATACAAGACTCTCATCTACCTTGCTGGTTCTGCTTCTGCTG 710 | |||||||| | |||| ||||| || | ||||| |||||||||||||||||||| | Sbjct 333373 GGCCTGAGTATGCAACCAAGTACAAAACCTTGATCTATCTTGCTGGTTCTGCTTCTGCCG 333432 Query 711 AGATCATTGCCGATATTGCACTTTGCCCATTTGAAGCTGTGAAGGTTCGTGTTCAGACAC 770 | | ||||| ||| |||| || ||||| | || |||||||| |||||||| || || | Sbjct 333433 AAGTGATTGCTGATGTTGCCCTCTGCCCCATGGAGGCTGTGAAAGTTCGTGTCCAAACTC 333492 Query 771 AGCCTGGATTTGCTAGGGGGATGTCTGATGGATTTCCCAAGTTTATCAAGTCCGAAGGA 829 ||||||| ||||| | || |||| || ||| |||||||||| |||||| | |||||| Sbjct 333493 AGCCTGGGTTTGCCCGAGGTTTGTCAGACGGACTTCCCAAGTTCATCAAGACTGAAGGA 333551 Score = 172 bits (190), Expect = 1e-40 Identities = 172/222 (77%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 884 ACTATGATGAAGTTTGCTTCCTTTGAGACCATTGTTGAGATGATTTACAAGTACGCAATC 943 || |||||||| || || ||||| ||||| ||||| |||||| | |||||| |||| ||| Sbjct 334547 ACCATGATGAAATTCGCATCCTTCGAGACTATTGTGGAGATGCTGTACAAGCACGCCATC 334606 Query 944 CCCAACCCAAAGAGTGAGTGCAGCAAAGGTCTGCAACTCGGAGTGAGTTTTGCCGGAGGT 1003 || | |||||| ||||||||||| | | ||||| || ||||| ||||| || || Sbjct 334607 CCAACCCCAAAAGACCAGTGCAGCAAATCTTTTCAACTTGGGGTGAGCTTTGCTGGTGGA 334666 Query 1004 TACGTTGCCGGAGTGTTCTGTGCCATCGTTTCTCATCCAGCAGACAATCTAGTGTCATTC 1063 || || || || || |||||||| |||| || || ||||| ||||| || ||||| ||| Sbjct 334667 TATGTGGCTGGTGTATTCTGTGCTTTCGTATCACACCCAGCTGACAACCTGGTGTCTTTC 334726 Query 1064 CTCAACAACGCTAAGGGAGCAACCGTTGGAGATGCG-GTGAA 1104 |||||||| || ||||| || || ||||| |||| | ||||| Sbjct 334727 CTCAACAATGCCAAGGGTGCTACTGTTGGTGATGTGCGTGAA 334768 Score = 95.1 bits (104), Expect = 2e-17 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 361 GATCGAGATGTATTCACCTGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTG 420 |||||||||||| || || || |||||||| || || || || || | |||||||| Sbjct 331281 GATCGAGATGTACTCGCCGGCTTTCTACGCCGCATGCACGGCCGGCGGGACCCTCAGCTG 331340 Query 421 TGGTCTTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG 475 ||| || || |||| | || | |||||||| ||| ||||||||||||| |||||| Sbjct 331341 TGGCCTCACCCACACGGCCCTTACTCCTCTTGATGTCGTCAAGTGCAACATGCAG 331395 Score = 48.2 bits (52), Expect = 0.003 Identities = 35/41 (85%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 839 TTGTATAAGGGTCTTGCTCCACTCTGGGGACGTCAGATTCC 879 ||||| || || |||| ||| || ||||||||||||||||| Sbjct 333655 TTGTACAAAGGACTTGTTCCTCTTTGGGGACGTCAGATTCC 333695 Score = 48.2 bits (52), Expect = 0.003 Identities = 39/47 (83%), Gaps = 3/47 (6%) Strand=Plus/Plus Query 1223 CCAACCACTGGTGGTGTTGCTCCAGCTCCTGCCATCGCAGCTACTGA 1269 ||||| |||||||||||| |||| ||||||| | || |||||||| Sbjct 335168 CCAACTACTGGTGGTGTTTCTCCTGCTCCTG---TTGCCGCTACTGA 335211 Score = 42.8 bits (46), Expect = 0.12 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | |||||||| ||| Sbjct 13438009 CACTCTCTACTTTTTATTTAATTTCAGTTTAAA 13438041 Score = 41.0 bits (44), Expect = 0.42 Identities = 33/40 (83%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 170 AATTCTCTGATCCCGAGCTTCCTCTATTCATCATCTTCAT 209 || ||||| ||||| ||||||||||| || || |||||| Sbjct 331117 AAATCTCTTATCCCAAGCTTCCTCTACTCTTCTCCTTCAT 331156 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1620 ATCTATTATTTTACTTTTTTGTTTTA 1645 || ||||||||||||||||| ||||| Sbjct 8026311 ATATATTATTTTACTTTTTTATTTTA 8026286 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1619 TATCTATTATTTTACTTTTTTGTTTT 1644 ||| ||||||||| |||||||||||| Sbjct 14821954 TATTTATTATTTTTCTTTTTTGTTTT 14821929 Score = 39.2 bits (42), Expect = 1.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 1320 AGGATTTTTGTTTGGAAAAATAAGAGAAA 1348 || |||||| ||| ||||||||||||||| Sbjct 24435666 AGCATTTTTATTTTGAAAAATAAGAGAAA 24435638 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1619 TATCTATTATTTTACTTTTTTGTTTT 1644 ||| ||||||||||||||| |||||| Sbjct 25079385 TATTTATTATTTTACTTTTCTGTTTT 25079360 Score = 37.4 bits (40), Expect = 5.1 Identities = 39/51 (76%), Gaps = 4/51 (8%) Strand=Plus/Plus Query 1610 TGGTTGCTCTATCTATTATTTTACTTTT----TTGTTTTAGAGATTATATA 1656 || ||| | || ||||||||||||||| |||| ||| | |||||||| Sbjct 28537530 TGATTGTTTTAGTTATTATTTTACTTTTTATGTTGTATTAAACATTATATA 28537580 Score = 37.4 bits (40), Expect = 5.1 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 155 ATGGAATCTCCGAAGAAT-TCTCTGATCCCGAGCT 188 ||||| |||||||||||| |||||| ||||||| Sbjct 37026136 ATGGATTCTCCGAAGAATCAGTCTGATACCGAGCT 37026102 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 73.4 bits (80), Expect = 7e-11 Identities = 163/244 (67%), Gaps = 18/244 (7%) Strand=Plus/Minus Query 589 TCAGGGTGCCTGCAAGTTTGGATTCTACGAGTACTTTAAGAAGACTTACTCTGA--CCTT 646 ||| || | |||||| ||||| |||| || |||||||||||| ||||||||| | || Sbjct 23297430 TCAAGGCGGCTGCAAATTTGGTCTCTATGAATACTTTAAGAAGCTTTACTCTGATGCATT 23297371 Query 647 GCTGGACCTGAGTACACTGCCAAATACAAGACTCTCATCTACCTTGCTGGTTCTGCTTCT 706 | | || | || || || | |||| | | || | ||| ||| Sbjct 23297370 GGTAGATCGTAG--------------CAGGAGTTTCATATTCTTTCTCAGCAGTGCATCT 23297325 Query 707 GCTGAGATCATTGCCGATATTGCACTTTGCCCATTTGAAGCTGTGAAGGTTCGTGTTCAG 766 ||| | | |||| ||| | || || || || || ||||||||||| ||||||||||| Sbjct 23297324 GCTCAAGTATTTGCTGATGTGGCTCTCTGTCCTTTCGAAGCTGTGAAAGTTCGTGTTCAA 23297265 Query 767 ACACAGCCTGGATTTGCTAGGGGGATGTCTGATGGATTTCCCAAGTT-TATCAAGTCCGA 825 || ||||| ||||| | ||| || |||||| |||| || || ||| | |||| Sbjct 23297264 ACGCAGCCCAATTTTGCAAAGGGCCTGCTTGATGGGGTTCCAAAATTATAT-AGAACCGA 23297206 Query 826 AGGA 829 |||| Sbjct 23297205 AGGA 23297202 Score = 39.2 bits (42), Expect = 1.5 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 1656 AAAATCTCGTTTTAAAACATCAAATCATAGATAGAT 1691 ||| |||||| || ||| ||||| ||||||||||| Sbjct 25780241 AAATTCTCGTCTTCAAATTTCAAACCATAGATAGAT 25780206 Score = 37.4 bits (40), Expect = 5.1 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 1602 TTCTCTTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTTAG 1646 || ||||||| | | | | |||||||||||||||| |||||| Sbjct 6533540 TTGTCTTTTGTTGAATTTTTGTATTATTTTACTTTTTGTTTTTAG 6533496 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12928924 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 12928956 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 50 ATTGGTGC--TTTTGGTTTTGGCAAAGCGTGAGTGAGAT 86 ||||| || ||||||||||||| ||| ||| |||||| Sbjct 14408719 ATTGGAGCATTTTTGGTTTTGGCTAAGAGTGCATGAGAT 14408757 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 46.4 bits (50), Expect = 0.010 Identities = 31/35 (89%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAATT 1603 ||||| |||||||||||| | |||||||| ||||| Sbjct 16496690 CACTCTCTACTTTTTATTTAATTTCAGTTTAAATT 16496724 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12258170 CATTCTCTACTTTTTATTTAATTTCAGTTTAAA 12258138 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 14767252 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 14767284 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1568 CCACTCACTACTTTTTATTCAGTTTCAGTTGAA 1600 |||||| |||||||||||| | ||| |||| || Sbjct 16517074 CCACTCCCTACTTTTTATTTAATTTTAGTTTAA 16517106 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 46.4 bits (50), Expect = 0.010 Identities = 31/35 (89%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAATT 1603 ||||| |||||||||||| | |||||||| ||||| Sbjct 7700196 CACTCTCTACTTTTTATTTAATTTCAGTTTAAATT 7700230 Score = 42.8 bits (46), Expect = 0.12 Identities = 49/64 (77%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 1613 TTGCTCTATCTATTA-TTTTACTTTTTTGTTTTAGAGATTATATAAAATCTCGTTTTAAA 1671 ||||||| ||| | |||||||||||| ||||| | |||| | |||| | ||||||| Sbjct 7417138 TTGCTCTTAGTATAAATTTTACTTTTTTTTTTTACATTTTATTTTAAATAT--TTTTAAA 7417195 Query 1672 ACAT 1675 | || Sbjct 7417196 AAAT 7417199 Score = 42.8 bits (46), Expect = 0.12 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | |||||||| ||| Sbjct 18584290 CACTCTCTACTTTTTATTTAATTTCAGTTTAAA 18584258 Score = 41.0 bits (44), Expect = 0.42 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Minus Query 1619 TATCTA-TTATTTTACTTTTTTGTTTTAGAGATTATATA 1656 |||||| ||||||||||| | |||||| ||||| |||| Sbjct 33690818 TATCTAATTATTTTACTTGTATGTTTTTTAGATTTTATA 33690780 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1564 ACACCCACTCACTACTTTTTATTCAGTTTCA 1594 ||||||| |||| ||||||||||| ||||| Sbjct 11661876 ACACCCATTCACATCTTTTTATTCAATTTCA 11661906 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 1571 CTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||| |||||||||||| | |||||||| ||| Sbjct 22305948 CTCTCTACTTTTTATTTAATTTCAGTTTAAA 22305918 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 132 CATCTCCTTCCTCCGCCGCCGCCATGGAATCTCCG 166 ||||| | |||||||||||||| ||||||||| Sbjct 11308915 CATCTTCCGCCTCCGCCGCCGCCGGCGAATCTCCG 11308949 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/29 (93%), Gaps = 2/29 (7%) Strand=Plus/Plus Query 1617 TCTATCTAT-TATTTTACTTTTTTGTTTT 1644 ||||||||| ||||||| ||||||||||| Sbjct 22216004 TCTATCTATATATTTTA-TTTTTTGTTTT 22216031 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 25586315 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 25586283 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 206 TCATCTCCGAGATCTTTCCTCCTCG 230 |||||||| | |||||||||||||| Sbjct 26011336 TCATCTCCTACATCTTTCCTCCTCG 26011360 Score = 37.4 bits (40), Expect = 5.1 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1452 ctctctctctctTTACATACTCT 1474 ||||||||| ||||||||||||| Sbjct 32552347 CTCTCTCTCACTTTACATACTCT 32552369 Score = 37.4 bits (40), Expect = 5.1 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 1603 TCTCTTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTTAGA 1647 ||| |||| | | | | | | |||| || |||||||||||||||| Sbjct 33827490 TCTTTTTTAGCTCCCCAAACAATTAGTTGACTTTTTTGTTTTAGA 33827446 Score = 37.4 bits (40), Expect = 5.1 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1624 ATTATTTTACTTTTTTGTTTTAG 1646 |||||||||||||||| |||||| Sbjct 37340871 ATTATTTTACTTTTTTATTTTAG 37340893 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 42.8 bits (46), Expect = 0.12 Identities = 28/31 (90%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 58 TTTTGGTTTTGGCAAAGCGTGAGTGAGATCG 88 ||||||||||||| ||| ||| ||||||||| Sbjct 10388167 TTTTGGTTTTGGCTAAGGGTGCGTGAGATCG 10388137 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 1609 TTGGTTGCTCTATCTATTATTTTACTTTTTT 1639 ||| ||| | ||| ||||||||||||||||| Sbjct 25993010 TTGATTGTTTTATTTATTATTTTACTTTTTT 25992980 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1630 TTACTTTTTTGTTTTAGAGATTATATAAAATCT 1662 ||| | |||| ||| ||||||||||||| |||| Sbjct 6699502 TTATTCTTTTTTTTAAGAGATTATATAATATCT 6699470 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1572 TCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || |||||||||||| | |||||||| ||| Sbjct 12721058 TCCCTACTTTTTATTTAATTTCAGTTTAAA 12721087 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 |||| |||||||||||| | |||||||| ||| Sbjct 14430520 CACTTTCTACTTTTTATTTAATTTCAGTTTAAA 14430488 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 1525 GATGAGAGGGACACACTCCAAGATAGAGAGAGTGG 1559 ||||||| ||| || || |||| ||||||||||| Sbjct 18712188 GATGAGACGGAAACTCTAAAAGAGAGAGAGAGTGG 18712154 Score = 37.4 bits (40), Expect = 5.1 Identities = 33/38 (87%), Gaps = 4/38 (11%) Strand=Plus/Plus Query 1623 TATTATTTTACTTTTT-TGTTTTA--GAG-ATTATATA 1656 |||||||||||||||| |||| || ||| |||||||| Sbjct 33651620 TATTATTTTACTTTTTATGTTGTATTGAGCATTATATA 33651657 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1608 TTTGGTTGCTCTATCTATTATTTTACTTTTTTGTT 1642 |||| || | || || |||||||||||||||||| Sbjct 33930274 TTTGTGTGTTTTAGCTTTTATTTTACTTTTTTGTT 33930308 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 42.8 bits (46), Expect = 0.12 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | |||||||| ||| Sbjct 12020715 CACTCCCTACTTTTTATTTAATTTCAGTTTAAA 12020747 Score = 41.0 bits (44), Expect = 0.42 Identities = 57/76 (75%), Gaps = 7/76 (9%) Strand=Plus/Minus Query 1619 TATCTATTATTTTACTTTTTTGTTTTAGAGATT-ATATAAAATCTCGTTTTAAA--ACAT 1675 ||||||||||||||||| | ||||| | ||| | ||||| | || |||| || | | Sbjct 165552 TATCTATTATTTTACTTGT---TTTTAAATATTCAAATAAATTTTCATTTTCAATTATAC 165496 Query 1676 CAAATC-ATAGATAGA 1690 ||||| |||| |||| Sbjct 165495 AAAATCAATAGTTAGA 165480 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 192 TCTATTCATCATCTTCATCTCCGAGATCTTTC 223 || || |||||||||||||||| | ||||||| Sbjct 4401111 TCGATCCATCATCTTCATCTCCAAAATCTTTC 4401142 Score = 39.2 bits (42), Expect = 1.5 Identities = 32/38 (84%), Gaps = 1/38 (3%) Strand=Plus/Plus Query 1622 CTATTATTTTACTTTTTTGTTTTAGAGATTATATAAAA 1659 || ||||| || ||||||||||||| |||| |||||| Sbjct 4733935 CTTTTATTGTAGTTTTTTGTTTTAGTAATTA-ATAAAA 4733971 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 311 ATTTCTCGGAAGAATTTCCTTATTGCATCT 340 |||||||||||||||||| | |||| ||| Sbjct 7942172 ATTTCTCGGAAGAATTTCATGGTTGCTTCT 7942201 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12015302 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 12015334 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12324636 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 12324668 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 21384538 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 21384570 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 42.8 bits (46), Expect = 0.12 Identities = 37/46 (80%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 1599 AAATTCTCTTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTT 1644 || |||| ||||| || | | |||||| ||||| ||||||||||| Sbjct 38392882 AATTTCTTTTTTGCTTTCGTTTTCTATTGTTTTATTTTTTTGTTTT 38392837 Score = 39.2 bits (42), Expect = 1.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 58 TTTTGGTTTTGGCAAAGCGTGAGTGAGAT 86 ||||||||||||| ||| ||| ||||||| Sbjct 23131684 TTTTGGTTTTGGCTAAGGGTGCGTGAGAT 23131712 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1574 ACTACTTTTTATTCAGTTTCAGTTGA 1599 ||| |||||||||||||| ||||||| Sbjct 47375264 ACTTCTTTTTATTCAGTTACAGTTGA 47375239 Score = 37.4 bits (40), Expect = 5.1 Identities = 47/61 (77%), Gaps = 4/61 (7%) Strand=Plus/Plus Query 1619 TATCTATTATTTTACTTTTTTGTTTTAGAGATTATATAAAATCTCGTTTTAAAACATCAA 1678 ||| |||| ||||||| |||| ||||| | ||| | | |||| || ||||||| || || Sbjct 3914761 TATATATTTTTTTACT-TTTTCTTTTAAATATT-TTTTAAATATC--TTTAAAAAATAAA 3914816 Query 1679 A 1679 | Sbjct 3914817 A 3914817 Score = 37.4 bits (40), Expect = 5.1 Identities = 40/52 (77%), Gaps = 2/52 (4%) Strand=Plus/Minus Query 1382 ATTTCTTCCTGATTTGAACTTTATCAtttttgttttttttGAAATTTGTGTT 1433 |||| | ||| ||| |||| || ||||| ||||||| ||||||||||| Sbjct 9001768 ATTTTTACCTTTTTTTTTCTTTTTCTTTTTTTTTTTTTT--AAATTTGTGTT 9001719 Score = 37.4 bits (40), Expect = 5.1 Identities = 37/46 (80%), Gaps = 3/46 (7%) Strand=Plus/Minus Query 1613 TTGCTCTATCTAT-TATTTTACTTTTTTGTTTTAGAGATTATATAA 1657 || || ||| ||| | |||| |||||| ||||||||||| ||||| Sbjct 11851767 TTACTTTATATATCTCTTTT--TTTTTTTTTTTAGAGATTTTATAA 11851724 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 16822870 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 16822902 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1572 TCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || |||||||||||| | |||||||| ||| Sbjct 23367449 TCTCTACTTTTTATTTAATTTCAGTTTAAA 23367478 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1572 TCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || |||||||||||| | |||||||| ||| Sbjct 23372643 TCTCTACTTTTTATTTAATTTCAGTTTAAA 23372672 Score = 37.4 bits (40), Expect = 5.1 Identities = 30/34 (88%), Gaps = 3/34 (9%) Strand=Plus/Minus Query 1473 CTCTTCCTATTGTTTCTTGTCCtt--tttttCTT 1504 |||||| ||||||||||| ||||| |||||||| Sbjct 26451060 CTCTTC-TATTGTTTCTTTTCCTTTGTTTTTCTT 26451028 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1624 ATTATTTTACTTTTTTGTTT 1643 |||||||||||||||||||| Sbjct 27994359 ATTATTTTACTTTTTTGTTT 27994340 Score = 37.4 bits (40), Expect = 5.1 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 1381 AATTTCTTCCTGATTTGAACTTTATCAtttttgttttttttGAAA 1425 || |||||||||| |||| ||| | ||||| |||||||| ||| Sbjct 46033466 AAATTCTTCCTGA-TTGAGTTTTTTTTTTTTTTTTTTTTTTAAAA 46033509 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 41.0 bits (44), Expect = 0.42 Identities = 29/31 (94%), Gaps = 2/31 (6%) Strand=Plus/Minus Query 1615 GCTCTATCTAT-TATTTTACTTTTTTGTTTT 1644 ||||||||||| ||||||| ||||||||||| Sbjct 11633884 GCTCTATCTATATATTTTA-TTTTTTGTTTT 11633855 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 1666 TTTAAAACATCAAATCATAGATAGATCTTGAA 1697 ||||||||||||| ||||||| | || ||||| Sbjct 12321080 TTTAAAACATCAATTCATAGAGACATTTTGAA 12321111 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| || ||||||| ||| Sbjct 9302936 CATTCCCTACTTTTTATTTAGCTTCAGTTTAAA 9302904 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 9308409 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 9308377 Score = 37.4 bits (40), Expect = 5.1 Identities = 37/47 (79%), Gaps = 1/47 (2%) Strand=Plus/Plus Query 1601 ATTCTCTTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTTAGA 1647 ||||| | || | |||| |||| || ||||||||||| ||||||| Sbjct 10591762 ATTCTTTCTTTTTAGCTCAATCTCTT-TTTTACTTTTTCTTTTTAGA 10591807 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12209675 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 12209643 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 1408 tttttgttttttttGAAATTTGTGTTCCTGAA 1439 || ||| ||||| ||||||||||||| ||||| Sbjct 2290629 TTGTTGATTTTTCTGAAATTTGTGTTGCTGAA 2290660 Score = 41.0 bits (44), Expect = 0.42 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAATT 1603 || || |||||||||||| | |||||||| ||||| Sbjct 13886740 CATTCCCTACTTTTTATTTAATTTCAGTTTAAATT 13886774 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 1408 tttttgttttttttGAAATTTGTGTTCCTGAATT 1441 || ||| ||||| ||||||||||||| |||| || Sbjct 17444462 TTGTTGATTTTTCTGAAATTTGTGTTGCTGATTT 17444429 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1285 AATGACGAAAAAGGTTATTAGGAGTT 1310 |||| |||||| |||||||||||||| Sbjct 24231909 AATGCCGAAAATGGTTATTAGGAGTT 24231934 Score = 37.4 bits (40), Expect = 5.1 Identities = 35/45 (78%), Gaps = 6/45 (13%) Strand=Plus/Minus Query 1627 ATTTTACTTTTTTGTTTTAGAGATTATATAAAATCTCGTTTTAAA 1671 ||||| ||||||| || ||||||||||||||| || |||| Sbjct 9184182 ATTTTTCTTTTTTTTT------ATTATATAAAATCTCTTTATAAA 9184144 Score = 37.4 bits (40), Expect = 5.1 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 1034 TCTCATCCAGCAGACAATCTAGTGTCATTCCTCAACA 1070 ||| ||||| |||||||| ||| | ||||||||||| Sbjct 25397386 TCTTATCCA-CAGACAATATAGGATTATTCCTCAACA 25397421 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1463 TTTACATACTCTCTTCCTATTGTTT 1487 |||| ||||| |||||||||||||| Sbjct 28486486 TTTAAATACTTTCTTCCTATTGTTT 28486510 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Minus Query 1570 ACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 |||| |||||||||||| | |||||||| ||| Sbjct 12549957 ACTCTCTACTTTTTATTTAATTTCAGTTTAAA 12549926 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1570 ACTCACTACTTTTTATTCAGTTTCAGTTGAA 1600 |||| |||||||||||| | |||||||| || Sbjct 3949610 ACTCTCTACTTTTTATTTAATTTCAGTTTAA 3949640 Score = 39.2 bits (42), Expect = 1.5 Identities = 51/68 (75%), Gaps = 6/68 (9%) Strand=Plus/Minus Query 1623 TATTATTTTACTTTTTTGTTTTAGAGATTATATAAAATCTCGTTTTAAAACATCAAATCA 1682 |||| |||||||||||| ||||| | ||| | |||| | |||||||| || ||| | Sbjct 27975033 TATT-TTTTACTTTTTTATTTTAAACATTTTTTAAA---TATTTTTAAAAAAT--AATAA 27974980 Query 1683 TAGATAGA 1690 | ||| || Sbjct 27974979 TGGATTGA 27974972 Score = 37.4 bits (40), Expect = 5.1 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Minus Query 242 AATTCCAACTCCAACGCTGCATTCGAGAAATCTCCTTCTCCG 283 || |||||||||||| ||| |||| | ||| |||| ||||| Sbjct 12433761 AACTCCAACTCCAACTCTGAATTCCACAAA-CTCCGACTCCG 12433721 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 13291546 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 13291578 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 13302603 CATTCCCTACTTTTTATTTAATTTCAGTTAAAA 13302635 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1572 TCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || |||||||||||| | |||||||| ||| Sbjct 16732862 TCCCTACTTTTTATTTAATTTCAGTTTAAA 16732891 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 18673186 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 18673218 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/29 (93%), Gaps = 2/29 (7%) Strand=Plus/Plus Query 1617 TCTATCTAT-TATTTTACTTTTTTGTTTT 1644 ||||||||| ||||||| ||||||||||| Sbjct 23937580 TCTATCTATATATTTTA-TTTTTTGTTTT 23937607 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 2/32 (6%) Strand=Plus/Minus Query 1319 TAGGATTTTTG--TTTGGAAAAATAAGAGAAA 1348 || |||||||| ||| ||||||||||||||| Sbjct 26240192 TAAGATTTTTGGGTTTTGAAAAATAAGAGAAA 26240161 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 1636 TTTTGTTTTAGAGATTATATAAAATCTCGTTTTA 1669 |||||||||||||||||| | | || || ||||| Sbjct 6089284 TTTTGTTTTAGAGATTATGTGATATTTCATTTTA 6089251 Score = 39.2 bits (42), Expect = 1.5 Identities = 36/45 (80%), Gaps = 2/45 (4%) Strand=Plus/Minus Query 1473 CTCTTCCTATTGTTTCTT--GTCCtttttttCTTTGTGTGATGTA 1515 |||||| ||||||||||| ||| || || || ||||| ||||| Sbjct 11523219 CTCTTCTTATTGTTTCTTTAGTCTTTATTCTCCTTGTGCAATGTA 11523175 Score = 39.2 bits (42), Expect = 1.5 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1595 GTTGAAATTCTCTTTTGGTTG 1615 ||||||||||||||||||||| Sbjct 19494155 GTTGAAATTCTCTTTTGGTTG 19494135 Score = 39.2 bits (42), Expect = 1.5 Identities = 34/42 (81%), Gaps = 3/42 (7%) Strand=Plus/Plus Query 1603 TCTCTTTTG---GTTGCTCTATCTATTATTTTACTTTTTTGT 1641 |||||||| |||||| ||| | |||||||||||||| || Sbjct 30462417 TCTCTTTTCTTAGTTGCTTTATATCTTATTTTACTTTTTAGT 30462458 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Minus Query 50 ATTGGTGC--TTTTGGTTTTGGCAAAGCGTGAGTGAGAT 86 ||||| || ||||||||||||| ||| ||| |||||| Sbjct 9251621 ATTGGAGCATTTTTGGTTTTGGCTAAGAGTGCATGAGAT 9251583 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 9679892 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 9679924 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/29 (93%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1617 TCTATCTAT-TATTTTACTTTTTTGTTTT 1644 ||||||||| ||||||| ||||||||||| Sbjct 11734894 TCTATCTATATATTTTA-TTTTTTGTTTT 11734867 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 59 TTTGGTTTTGGCAAAGCGTGAGTGAGATCG 88 |||||||||||| ||| ||| |||||||| Sbjct 13747974 TTTGGTTTTGGCTAAGGGTGCATGAGATCG 13748003 Score = 37.4 bits (40), Expect = 5.1 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1325 TTTTGTTTGGAAAAATAAGAGAA 1347 |||| |||||||||||||||||| Sbjct 17292501 TTTTCTTTGGAAAAATAAGAGAA 17292523 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 125 CTATCTCCATCTCCTTCCTCCGCCGCCGCCATG 157 ||||| |||||| || || | |||||||||||| Sbjct 18202687 CTATCACCATCTACTGCCACTGCCGCCGCCATG 18202655 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 18778827 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 18778795 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 24197364 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 24197332 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 24767633 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 24767665 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | ||||| || ||| Sbjct 25401989 CACTCTCTACTTTTTATTTAATTTCAATTTAAA 25402021 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 1640 GTTTTAGAGATTATATAAAATCTCGTTTTAAAA 1672 ||||| | |||||| ||||||||||||||||| Sbjct 31054922 GTTTTTGTTATTATA-AAAATCTCGTTTTAAAA 31054891 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1624 ATTATTTTACTTTTTTGTTTTAGAG 1648 ||||| |||||||||||||||| || Sbjct 360442 ATTATATTACTTTTTTGTTTTAAAG 360466 Score = 37.4 bits (40), Expect = 5.1 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1616 CTCTATCTATTATTTTACTTTTTTGTTT 1643 |||| ||||||||||| ||||||| ||| Sbjct 1911713 CTCTTTCTATTATTTTCCTTTTTTATTT 1911686 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1625 TTATTTTACTTTTTTGTTTT 1644 |||||||||||||||||||| Sbjct 17855578 TTATTTTACTTTTTTGTTTT 17855597 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1476 TTCCTATTGTTTCTTGTCCtttttttCTTT 1505 ||||||||||||||| | |||| | ||||| Sbjct 19697842 TTCCTATTGTTTCTTCTTCTTTCTCTCTTT 19697871 Score = 37.4 bits (40), Expect = 5.1 Identities = 36/44 (82%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 1070 AACGCTAA-GGGAGCAAC-CGTTGGAGATGCGGTGAAGAAGATT 1111 |||||||| ||| |||| | ||| | || |||||||||||||| Sbjct 20503912 AACGCTAATGGGTACAACACATTGAAAATACGGTGAAGAAGATT 20503955 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 21935917 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 21935885 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 21944349 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 21944317 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 25414431 CAATCTCTACTTTTTATTTAATTTCAGTTTAAA 25414463 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 39.2 bits (42), Expect = 1.5 Identities = 32/38 (84%), Gaps = 1/38 (3%) Strand=Plus/Minus Query 1607 TTTTGGTTGCTCTATCTATTATTTTACTTTTTTGTTTT 1644 |||||||| || ||| | | ||||||||||||| |||| Sbjct 10825528 TTTTGGTTTCTTTATGT-TAATTTTACTTTTTTTTTTT 10825492 Score = 39.2 bits (42), Expect = 1.5 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 1623 TATTATTTTACTTTTTTGTTTTAGAGATTATATAAAATC 1661 |||||||||| ||| |||| ||||||||||||||| Sbjct 17542759 TATTATTTTATCATTTCTATTTACAGATTATATAAAATC 17542797 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 1568 CCACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 |||||| |||||||||||| | ||||| || ||| Sbjct 20848643 CCACTCTCTACTTTTTATTTAATTTCATTTTAAA 20848676 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | ||| |||| ||| Sbjct 10846265 CACTCTCTACTTTTTATTTAATTTTAGTTTAAA 10846297 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 12432156 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 12432188 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/38 (84%), Gaps = 4/38 (11%) Strand=Plus/Plus Query 1623 TATTATTTTACTTTTT-TGTTTTAGAG---ATTATATA 1656 |||||||||||||||| |||| || || |||||||| Sbjct 12450316 TATTATTTTACTTTTTATGTTGTATAGAACATTATATA 12450353 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 2/32 (6%) Strand=Plus/Plus Query 1628 TTTTACTTTTTTGTTTTAGAGATTATATAAAA 1659 ||||| ||||||||||| ||||||| ||||| Sbjct 16801735 TTTTAATTTTTTGTTTT--AGATTATGTAAAA 16801764 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 1302 TTAGGAGTTC-GATGGGGTAGGATTTTTGTTT 1332 ||| |||||| |||| |||||||||||| ||| Sbjct 26376287 TTAAGAGTTCAGATGTGGTAGGATTTTTTTTT 26376256 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 2717854 CATTCTCTACTTTTTATTTAATTTCAGTTTAAA 2717822 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 3985152 CATTCCCTACTTTTTATTTAATTTCAGTTTAAA 3985184 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 || || |||||||||||| | |||||||| ||| Sbjct 15633477 CATTCTCTACTTTTTATTTAATTTCAGTTTAAA 15633445 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1569 CACTCACTACTTTTTATTCAGTTTCAGTTGAAA 1601 ||||| |||||||||||| | ||| |||| ||| Sbjct 16439449 CACTCTCTACTTTTTATTTAATTTTAGTTTAAA 16439417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 890759541938 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2