BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=2199 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr7D 183 7e-44 lcl|Jr1S 170 4e-40 lcl|Jr1D 161 2e-37 lcl|Jr7S 156 1e-35 lcl|Jr2D 147 5e-33 lcl|Jr6D 77.0 8e-12 lcl|Jr8S 41.0 0.54 lcl|Jr8D 41.0 0.54 lcl|Jr4S 41.0 0.54 lcl|Jr6S 39.2 1.9 lcl|Jr4D 39.2 1.9 lcl|Jr5S 37.4 6.6 lcl|Jr5D 37.4 6.6 lcl|Jr3S 37.4 6.6 lcl|Jr3D 37.4 6.6 lcl|Jr2S 37.4 6.6 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 183 bits (202), Expect = 7e-44 Identities = 172/219 (79%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 697 AGGGTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGA 756 |||||||||| |||||||| ||||||||||| ||||| || ||||||||||| ||| | Sbjct 7407617 AGGGTGTTGCCATGCCTGCCATGAATAATATTTTGTCAAAATGGGTTCCTGTAGCAGAAA 7407676 Query 757 GAAGCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAG 816 |||| |||||| | || | || ||||| || ||||||||||| || ||||| || || | Sbjct 7407677 GAAGTAGATCATTAGCATTAGTGTACAGTGGGATGTACCTTGGGTCAGTCACTGGCTTGG 7407736 Query 817 CCTTTTCGCCTTTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGGT 876 | ||||| || || || || || || ||||||||||| || || || | ||||| || | Sbjct 7407737 CATTTTCACCGTTTTTAATCCACCAGTTTGGATGGCCATCAGTCTTCTTCTCTTTTGGTT 7407796 Query 877 CTCTTGGAACTGTATGGTTGACTCTGTGGCTAACTAAGG 915 |||| || || || ||||| || ||||||||| ||||| Sbjct 7407797 CTCTAGGGACAGTTTGGTTTGCTGTGTGGCTAAGTAAGG 7407835 Score = 123 bits (136), Expect = 6e-26 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 913 AGGCAGAGAGTTCACCATTAGAAGATCCAACATTGCTCCCTGAAGAAAGAAAGCTAATTG 972 |||| | ||||| || | || |||||| | |||| |||||||| | ||||| || Sbjct 7407997 AGGCGCATAGTTCTCCTCTTGAGGATCCAGAACTGCTGCCTGAAGAGAAGAAGCTGATCA 7408056 Query 973 CAGACAACTGTGCTAGCAAAGAGCCAGTGAAGTCGATCCCGTGGAGGCTGATATTGTCGA 1032 |||| | | | ||| || || || || | || || ||| | ||||| ||||| | Sbjct 7408057 TCTCCAACAGCGTTTCCAATGAACCTGTTAAAACAATACCTTGGGGACTGATTTTGTCAA 7408116 Query 1033 AACCACCGGTTTGGGCTCTCATCAGTTGC-CACTTTTGTCACAACTGGGGAACATTCATT 1091 ||||||| || ||||| || || ||| | || || |||||||||||||| ||||| ||| Sbjct 7408117 AACCACCTGTATGGGCCCTAAT-AGTGTCTCATTTCTGTCACAACTGGGGGACATTTATT 7408175 Query 1092 CTCTTAACATGGATGCCAACTTATTACCATCAAGT 1126 || || ||||||||||||||||| || ||||||| Sbjct 7408176 CTTTTGACATGGATGCCAACTTACTATAATCAAGT 7408210 Score = 114 bits (126), Expect = 3e-23 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 435 GTGAATATGAGTATAGCTATACTTCCGATGTCAGCTGAGTATGGTTGGAATCCAGCAACA 494 || |||||||| || || |||||||| |||||||| |||| |||||| ||| | ||| Sbjct 7406705 GTAAATATGAGCATTGCCATACTTCCAATGTCAGCAGAGTTCAATTGGAACCCAACCACA 7406764 Query 495 GTTGGTCTGATTCAGTCTTCTTTCTTCTGGGGTTACCTTCTTACACAGATA 545 ||||||||||| ||||||||||| |||||||| ||||| ||||| ||| || Sbjct 7406765 GTTGGTCTGATACAGTCTTCTTTTTTCTGGGGCTACCTCCTTACTCAGGTA 7406815 Score = 114 bits (126), Expect = 3e-23 Identities = 120/155 (77%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 546 GCTGGTGGAATTTGGGCAGACACTGTAGGAGGGAAAAGGGTTCTTGGATTCGGTGTTATT 605 |||||||| || |||||||| || || || || || ||| || ||||| || || || Sbjct 7407236 GCTGGTGGCATATGGGCAGATACAGTTGGTGGAAAGCTGGTCCTGGGATTTGGGGTAGTT 7407295 Query 606 TGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAA-CTCGGTCTTCCTTACTT 664 |||||||| || || ||| |||||||||| | ||||| ||| || ||| | |||| ||| Sbjct 7407296 TGGTGGTCGATTGCCACAGCTCTCACTCCTATTGCTGCCAAAGCTGGGT-TGCCTTTCTT 7407354 Query 665 GCTCGTTGTTCGTGCTTTCATGGGAGTTGGAGAGG 699 || |||||||||||||||||||| | || |||| Sbjct 7407355 ACTTGTTGTTCGTGCTTTCATGGGGATCGGTGAGG 7407389 Score = 104 bits (114), Expect = 5e-20 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1261 AGATAATGCAAACAATAGGGTTTCTTGGACCAGCGTTCTTCCTAACACAGCTGAAACACA 1320 |||| ||||||||||| || |||||||| || || |||||| |||| ||| ||| || Sbjct 7409355 AGATCATGCAAACAATTGGATTTCTTGGTCCTGCTTTCTTCTTAACTCAGTTGAGCCATG 7409414 Query 1321 TAGATTCTCCTACAATGGCTGTTTTGTGCATGGCTTGTAGTCAGG 1365 | |||||||| ||||||||||| |||| ||||| |||||||||| Sbjct 7409415 TTAATTCTCCTGCAATGGCTGTTGTGTGTATGGCATGTAGTCAGG 7409459 Score = 102 bits (112), Expect = 2e-19 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1125 GTGCTGAAGTTCAACCTTATGGAGTCAGGACTTCTCTCTGTATTTCCATGGATGACAATG 1184 || ||||||||||| |||| ||| || || ||| | | ||| || || ||| | |||||| Sbjct 7408959 GTCCTGAAGTTCAATCTTACGGACTCTGGGCTTATTTGTGTTTTGCCTTGGCTTACAATG 7409018 Query 1185 GCAATATCTGCAAATGCCGGTGGATGGATTGCCGATACACTTGTCAGCCGAGGTTTCTCT 1244 ||| | ||||||||| || || |||||||| ||||| || || ||| |||||| ||| Sbjct 7409019 GCATTTTCTGCAAATCTTGGAGGGTGGATTGCTGATACGCTAGTTAGCAAAGGTTTATCT 7409078 Query 1245 GTCACGAATGTCCGCAAGATA 1265 || || || || || ||| || Sbjct 7409079 GTGACAAAAGTTCGTAAGGTA 7409099 Score = 75.2 bits (82), Expect = 3e-11 Identities = 64/78 (82%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 1363 AGGGGACTGATGCGTTTTCACAGTCTGGTCTATACTCTAACCATCAAGACATCGCTCCAA 1422 |||| |||||||| || ||||||||||| ||||| || ||||||||||| || || || Sbjct 7409801 AGGGTACTGATGCATTCTCACAGTCTGGCCTATATTCAAACCATCAAGATATTGCCCCTC 7409860 Query 1423 GATACTCTG-GAGTGTTA 1439 |||| |||| |||| ||| Sbjct 7409861 GATATTCTGTGAGTATTA 7409878 Score = 69.8 bits (76), Expect = 1e-09 Identities = 68/88 (77%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1431 GGAGTGTTACTTGGTTTGTCTAATACTGCTGGAGTACTTGCCGGAGTTCTTGGCACAGCT 1490 ||||| || |||||| | || ||||||||||||||||| || || || |||| ||||| Sbjct 7410006 GGAGTATTGCTTGGTCTATCAAATACTGCTGGAGTACTGGCAGGTGTATTTGGTACAGCG 7410065 Query 1491 GCGACTGGTCACATACTACAACACGGTT 1518 || || || |||| | ||||| |||| Sbjct 7410066 GCAACAGGCTACATCTTGCAACATGGTT 7410093 Score = 62.6 bits (68), Expect = 2e-07 Identities = 55/69 (80%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2019 AGAATTTGATCTTGTGAAGGAGGAAGAGGAGTTTATGAATTGTATGCAGTCTTCTATTGC 2078 ||||||||| |||| || |||||||||||||| ||||| | |||||||| || || || Sbjct 7421882 AGAATTTGACCTTGAAAAAGAGGAAGAGGAGTTGATGAACTCGATGCAGTCCTCAATGGC 7421941 Query 2079 CGCTGATCT 2087 ||| ||| Sbjct 7421942 TTCTGTTCT 7421950 Score = 60.8 bits (66), Expect = 6e-07 Identities = 63/83 (76%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 354 CCATGGTGGGAAGAGTTTCCGAAGCGGTGGGTGATTGTGTTACTCTGTTTCTCAGCTTTT 413 || |||| |||| |||||| || | ||||| ||||| | | |||||||| || || Sbjct 7406476 CCCTGGTTGGAACGGTTTCCCAAAAGATGGGTCATTGTCGTTTTATGTTTCTCGGCGTTC 7406535 Query 414 CTTCTCTGCAATATGGACAGAGT 436 || |||||||||||||| || || Sbjct 7406536 CTACTCTGCAATATGGATAGGGT 7406558 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 71 CGCCATGAACGCGAGAGCTCTTCTTTGCTC 100 |||||||| ||| ||||||||||| | ||| Sbjct 7406145 CGCCATGAGCGCTAGAGCTCTTCTCTACTC 7406174 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1305 ACACAGCTGAAACACATAGATTCTCCTACA 1334 |||||||||||||| | || ||||| |||| Sbjct 8136190 ACACAGCTGAAACAAACAGCTTCTCTTACA 8136219 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 170 bits (188), Expect = 4e-40 Identities = 170/218 (78%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 697 AGGGTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGA 756 |||||||||| |||||||| |||||||||||| | || |||||| |||| ||| ||||| Sbjct 4833223 AGGGTGTTGCTATGCCTGCAATGAATAATATACTCTCTAAGTGGATTCCCGTGTCAGAGA 4833282 Query 757 GAAGCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAG 816 |||||||| |||| || || || |||||||| ||||| ||||| |||||||| || || | Sbjct 4833283 GAAGCAGAGCACTTGCACTAGTATACAGCGGCATGTATCTTGGTTCTGTCACAGGGTTGG 4833342 Query 817 CCTTTTCGCCT-TTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGG 875 | | || ||| |||| || || ||||| ||||| ||||||||||| || || || Sbjct 4833343 CTGTCTCTCCTGCTCTT-ATCCACAGGTTTGGGTGGCCATCTGTGTTTTACTCGTTTGGC 4833401 Query 876 TCTCTTGGAACTGTATGGTTGACTCTGTGGCTAACTAA 913 || ||||||| | | ||||| | | ||||||| ||| Sbjct 4833402 TCCCTTGGAAGTATCTGGTTTGCGTTATGGCTAAGTAA 4833439 Score = 84.2 bits (92), Expect = 5e-14 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1008 ATCCCGTGGAGGCTGATATTGTCGAAACCACCGGTTTGGGCTCTCATCAGTTGCCACTTT 1067 || || |||| |||| || || ||| |||| ||||||||||| || | | ||| || Sbjct 4833715 ATTCCTTGGAAATTGATTTTATCAAAAGCACCTGTTTGGGCTCTTATAATCTCCCATTTC 4833774 Query 1068 TGTCACAACTGGGGAACATTCATTCTCTTAACATGGATGCCAACTTATTACCATCAAGT 1126 || || || ||||||||||| ||| | || || |||||||| ||||| ||| |||| || Sbjct 4833775 TGCCATAATTGGGGAACATTTATTTTATTGACTTGGATGCCTACTTACTACAATCAGGT 4833833 Score = 82.4 bits (90), Expect = 2e-13 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1121 TCAAGTGCTGAAGTTCAACCTTATGGAGTCAGGACTTCTCTCTGTATTTCCATGGATGAC 1180 ||| || ||||||||||||||| ||||| || || ||| ||| || |||||| |||| Sbjct 4834982 TCAGGTTTTGAAGTTCAACCTTACCGAGTCTGGGCTCTTCTGTGTCTTGCCATGGTTGAC 4835041 Query 1181 AATGGCAATATCTGCAAATGCCGGTGGATGGATTGCCGATACACTTGTCAGCCGAGGT 1238 ||||| | | ||| ||| || || ||||| || || |||||||| ||| ||||| Sbjct 4835042 CATGGCTGTTTTTGCCAATATTGGAGGCTGGATAGCAGACACACTTGTGAGCAGAGGT 4835099 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 435 GTGAATATGAGTATAGCTATACTTCCGATGTCAGCTGAGTATGGTTGGAATCCAGCAACA 494 ||||||||||| || ||||||||||| ||||| |||| ||||| |||||| Sbjct 4832262 GTGAATATGAGCATTGCTATACTTCCAATGTCGAAGGAGTTCAACTGGAACAGCGCAACA 4832321 Query 495 GTTGGTCTGATTCAGTCTTCTTTCTTCTGGGGTTACCTTCTTACACAG 542 ||||| | || ||||| || || |||||||| ||||| ||||| ||| Sbjct 4832322 GTTGGCTTAATCCAGTCCTCCTTTTTCTGGGGATACCTACTTACTCAG 4832369 Score = 62.6 bits (68), Expect = 2e-07 Identities = 67/89 (75%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 1515 GGTTCTTGGGATGACGTTTTCACGATTTCGGTCGGTCTTTACCTCGTTGGGACCGTCATT 1574 |||||||||||||| || |||| | | | || | | |||||| | || ||| | || Sbjct 4838440 GGTTCTTGGGATGATGTGTTCAAGGTGGCTGTTGCATTGTACCTCATAGGCACCTTGATC 4838499 Query 1575 TGGAACCTATTTTCAACCGGAGAGAAGAT 1603 |||||||| |||||||| ||||| | ||| Sbjct 4838500 TGGAACCTCTTTTCAACTGGAGAAAGGAT 4838528 Score = 41.0 bits (44), Expect = 0.54 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1886 CTCTATATATATTTGTATCATAAAGATATT 1915 || ||| ||||||| ||||||||||||||| Sbjct 3362803 CTTTATTTATATTTCTATCATAAAGATATT 3362774 Score = 41.0 bits (44), Expect = 0.54 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1822 AGATGATTTTTTGTAAATAAACAAA 1846 ||||||||||||| ||||||||||| Sbjct 22717856 AGATGATTTTTTGAAAATAAACAAA 22717832 Score = 39.2 bits (42), Expect = 1.9 Identities = 29/33 (88%), Gaps = 2/33 (6%) Strand=Plus/Minus Query 1817 TATACAGATGATTTTTTGTAAATA--AACAAAG 1847 |||||| ||||||||||| ||||| ||||||| Sbjct 14034199 TATACAAATGATTTTTTGCAAATATTAACAAAG 14034167 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 751 AAGAGAGAAGCAGATCACTC 770 |||||||||||||||||||| Sbjct 3123544 AAGAGAGAAGCAGATCACTC 3123563 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 1831 TTTGTAAATAAACAAAG-CTCACACTT 1856 ||||||||||||||||| ||||| ||| Sbjct 8507132 TTTGTAAATAAACAAAGACTCACTCTT 8507106 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 161 bits (178), Expect = 2e-37 Identities = 168/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 697 AGGGTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGA 756 |||||||||| |||||||| ||||||||||| | || |||||| |||| || ||||| Sbjct 8201771 AGGGTGTTGCTATGCCTGCAATGAATAATATGCTTTCTAAGTGGATTCCGGTTTCAGAGA 8201830 Query 757 GAAGCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAG 816 |||||||| |||| || || || ||||| || ||||| ||||| |||||| | || || | Sbjct 8201831 GAAGCAGAGCACTTGCACTAGTATACAGTGGCATGTATCTTGGTTCTGTCGCAGGGTTGG 8201890 Query 817 CCTTTTCGCCT-TTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGG 875 || | || ||| ||||| || || | ||||| ||||| || |||||||| || || || Sbjct 8201891 CCGTCTCTCCTGTTCTT-ATCCACAACTTTGGGTGGCCATCAGTGTTTTACTCATTTGGC 8201949 Query 876 TCTCTTGGAACTGTATGGTTGACTCTGTGGCTAACTAA 913 |||||||||| | | ||||| | | ||| ||| ||| Sbjct 8201950 TCTCTTGGAAGTATCTGGTTTGCATTATGGATAAGTAA 8201987 Score = 111 bits (122), Expect = 4e-22 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 540 CAGATAGCTGGTGGAATTTGGGCAGACACTGTAGGAGGGAAAAGGGTTCTTGGATTCGGT 599 ||| | |||||||| |||||||||| || |||| || || ||| | ||||| || Sbjct 38526256 CAGGTTGCTGGTGGCCTTTGGGCAGATACAATAGGTGGCAAGCTGGTCATGGGATTTGGC 38526197 Query 600 GTTATTTGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAACTCGGTCTTCCT 659 | |||||||||| || |||| || ||||||||| | ||||||||||| || | ||| Sbjct 38526196 TTAGTTTGGTGGTCGATTGCTATAACTCTCACTCCCATTGCTGCTAAACTTGGATTGCCT 38526137 Query 660 TACTTGCTCGTTGTTCGTGCTTTCATGGG 688 | | | || |||||||||||||||||||| Sbjct 38526136 TTCCTTCTTGTTGTTCGTGCTTTCATGGG 38526108 Score = 96.9 bits (106), Expect = 8e-18 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 913 AGGCAGAGAGTTCACCATTAGAAGATCCAACATTGCTCCCTGAAGAAAGAAAGCTAATTG 972 ||||| | ||||| || | || |||| ||| | | |||||| | |||||||| Sbjct 38525538 AGGCATATAGTTCTCCTCTTGAGGATCTTGAGTTGTTGCTTGAAGAGAAGAAGCTAATCC 38525479 Query 973 CAGACAACTGTGCTAGCAAAGAGCCAGTGAAGTCGATCCCGTGGAGGCTGATATTGTCGA 1032 |||| | | |||||| || || || | || || ||| | || || ||||| | Sbjct 38525478 TTTTCAACAGCATTTCCAAAGAACCTGTTAAAACAATACCTTGGGGACTAATTTTGTCAA 38525419 Query 1033 AACCACCGGTTTGGGCTCTCATCAGTTGC-CACTTTTGTCACAACTGGGGAACATTCATT 1091 ||||||| || ||||| || || ||| | ||||| |||| ||| ||||||||||| ||| Sbjct 38525418 AACCACCTGTATGGGCCCTAAT-AGTGTCTCACTTCTGTCGCAATTGGGGAACATTTATT 38525360 Query 1092 CTCTTAACATGGATGCCAACTTATTACCATCAAGT 1126 || | |||||||||||||| || || | ||||| Sbjct 38525359 CTTCTGACATGGATGCCAACCTACTATAACCAAGT 38525325 Score = 91.5 bits (100), Expect = 3e-16 Identities = 97/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 1003 AGTCGATCCCGTGGAGGCTGATATTGTCGAAACCACCGGTTTGGGCTCTCATCAGTTGCC 1062 |||| || || |||| ||||| || || ||| |||| || |||||||| || | | || Sbjct 8202293 AGTC-ATTCCTTGGAAACTGATTTTATCAAAAGCACCCGTGTGGGCTCTTATAATCTCCC 8202351 Query 1063 ACTTTTGTCACAACTGGGGAACATTCATTCTCTTAACATGGATGCCAACTTATTACCATC 1122 | || || || || ||||||||||||||| | || ||||||||||| ||||| ||| | | Sbjct 8202352 ATTTCTGCCATAATTGGGGAACATTCATTTTATTGACATGGATGCCTACTTACTACAACC 8202411 Query 1123 AAGTGCT 1129 | || || Sbjct 8202412 AGGTACT 8202418 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 435 GTGAATATGAGTATAGCTATACTTCCGATGTCAGCTGAGTATGGTTGGAATCCAGCAACA 494 || || ||||| || ||||||||||| ||||| |||| | |||||| |||||| Sbjct 8200753 GTTAACATGAGCATTGCTATACTTCCAATGTCGAAGGAGTTTAATTGGAACAGTGCAACA 8200812 Query 495 GTTGGTCTGATTCAGTCTTCTTTCTTCTGGGGTTACCTTCTTACACAG 542 || || | |||||||| || || |||||||| ||||| ||||| ||| Sbjct 8200813 GTCGGATTAATTCAGTCCTCCTTTTTCTGGGGCTACCTACTTACTCAG 8200860 Score = 77.0 bits (84), Expect = 8e-12 Identities = 83/110 (75%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1129 TGAAGTTCAACCTTATGGAGTCAGGACTTCTCTCTGTATTTCCATGGATGACAATGGCAA 1188 |||| |||||||||| ||||| || || | | ||| || |||||| |||| ||||| Sbjct 8203134 TGAATTTCAACCTTACCGAGTCTGGGCTATTGTGTGTCTTGCCATGGTTGACTATGGCTG 8203193 Query 1189 TATCTGCAAATGCCGGTGGATGGATTGCCGATACACTTGTCAGCCGAGGT 1238 | ||| ||| || ||||||||||| || |||||||| ||| ||||| Sbjct 8203194 CTTTTGCTAATATAGGAGGATGGATTGCAGACACACTTGTGAGCAGAGGT 8203243 Score = 77.0 bits (84), Expect = 8e-12 Identities = 81/106 (76%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 594 TTCGGTGTTATTTGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAACTCGGT 653 || ||||| |||||||||| || |||| | ||||||||| ||||||||||| || Sbjct 45679161 TTTGGTGTAGTTTGGTGGTCGATTGCTATAGCTCTCACTCCCAGTGCTGCTAAACTTGGA 45679102 Query 654 CTTCCTTACTTGCTCGTTGTTCGTGCTTTCATGGGAGTTGGAGAGG 699 | ||| || || ||||||| |||||||||||| |||| |||| Sbjct 45679101 TTGCCT---TTCCTTGTTGTTCATGCTTTCATGGGCATTGGTGAGG 45679059 Score = 75.2 bits (82), Expect = 3e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 354 CCATGGTGGGAAGAGTTTCCGAAGCGGTGGGTGATTGTGTTACTCTGTTTCTCAGCTTTT 413 || |||||||| ||||||| ||||| ||||||||||| | || ||||| || || ||| Sbjct 8200415 CCTTGGTGGGAGCAGTTTCCCAAGCGTTGGGTGATTGTACTGCTTTGTTTTTCCGCATTT 8200474 Query 414 CTTCTCTGCAATATGGACAGAGTGAATAT 442 || | ||||| |||||| | |||| ||| Sbjct 8200475 CTATTGTGCAACATGGACCGTGTGAGTAT 8200503 Score = 75.2 bits (82), Expect = 3e-11 Identities = 68/85 (80%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 604 TTTGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAACTCGGTCTTCCTTACT 663 |||||||||| || ||||||| ||||||||| | ||| ||||||| || | |||| | Sbjct 42830703 TTTGGTGGTCGATTGCTACAACTCTCACTCCCATTGCTACTAAACTTGGATTGCCTTTC- 42830761 Query 664 TGCTCGTTGTTCGTGCTTTCATGGG 688 || ||||||| |||||||||||| Sbjct 42830762 --CTTGTTGTTCATGCTTTCATGGG 42830784 Score = 57.2 bits (62), Expect = 7e-06 Identities = 59/75 (79%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 1020 CTGATATTGTCGAAACCACCGGTTTGGGCTCTCATCAGTTGC-CACTTTTGTCACAACTG 1078 || || ||||| ||||||| || ||||| || || ||| | ||||| |||||||| || Sbjct 42832203 CTAATTTTGTCAAAACCACATGTATGGGCCCTAAT-AGTGTCTCACTTCTGTCACAATTG 42832261 Query 1079 GGGAACATTCATTCT 1093 ||||||||| |||| Sbjct 42832262 GGGAACATTTGTTCT 42832276 Score = 39.2 bits (42), Expect = 1.9 Identities = 62/88 (70%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 1515 GGTTCTTGGGATGACGTTTTCACGATTTCGGTCGGTCTTTACCTCGTTGGGACCGTCATT 1574 |||||||||||||| || |||| | | | || | | ||| | | || || | | Sbjct 8206846 GGTTCTTGGGATGATGTATTCAAGGTGGCTGTTGCATTGTACATACTAGGCACATTGGTC 8206905 Query 1575 TGGAACCTATTTTCAACCGGAGAGAAGA 1602 |||||||| ||||| || ||||| |||| Sbjct 8206906 TGGAACCTCTTTTCGACTGGAGA-AAGA 8206932 Score = 37.4 bits (40), Expect = 6.6 Identities = 38/46 (83%), Gaps = 4/46 (9%) Strand=Plus/Plus Query 1889 TATATATATTTGTATCATAAAGA-TATTACACGCAATTCTCTAATA 1933 ||||||||||||||| ||| || ||| |||| |||||| ||||| Sbjct 16429714 TATATATATTTGTATTTTAATGACTAT--CACG-AATTCTATAATA 16429756 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1887 TCTATATATATTTGTATCATAAAGATAT 1914 ||||||||||| | |||||||| ||||| Sbjct 17043594 TCTATATATATATATATCATAATGATAT 17043621 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1887 TCTATATATATTTGTATCATAAAGATAT 1914 ||||||||||| ||||| ||| |||||| Sbjct 47510201 TCTATATATATGTGTATTATATAGATAT 47510228 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 156 bits (172), Expect = 1e-35 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 697 AGGGTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGA 756 |||||||||| |||||||| |||||||| || | || || |||||| | || ||||| Sbjct 6863647 AGGGTGTTGCTATGCCTGCCATGAATAACATTCTATCAAAATGGGTTTCAGTAGCAGAGA 6863706 Query 757 GAAGCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAG 816 |||| |||||| | || | || ||||| ||||||||||||||||| ||||| | | | Sbjct 6863707 GAAGTAGATCATTAGCATTGGTGTACAGTGGAATGTACCTTGGATCAGTCACTAGCCTGG 6863766 Query 817 CCTTTTCGCCTTTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGGT 876 ||||||| || || || || || | ||||| ||||| || || ||||| || || || | Sbjct 6863767 CCTTTTCACCGTTTTTAATCCACTAGTTTGGTTGGCCATCAGTCTTTTACTCCTTTGGTT 6863826 Query 877 CTCTTGGAACTGTATGGTTGACTCTGTGGCTAACTAAGG 915 |||| ||||| || ||| | | ||||||||| | ||| Sbjct 6863827 CTCTAGGAACAGTTTGGGTTTTTGTGTGGCTAAGTTAGG 6863865 Score = 118 bits (130), Expect = 2e-24 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 540 CAGATAGCTGGTGGAATTTGGGCAGACACTGTAGGAGGGAAAAGGGTTCTTGGATTCGGT 599 ||| | | |||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 6863309 CAGGTTGTTGGTGGCATTTGGGCAGATACAGTAGGTGGCAAGCTAGTCCTGGGATTTGGT 6863368 Query 600 GTTATTTGGTGGTCAATCGCTACAATTCTCACTCCTGTAGCTGCTAAACTCGGTCTTCCT 659 || |||||||||| || |||||| ||||||||| | |||||||||| || | | | Sbjct 6863369 GTAGTTTGGTGGTCGATTGCTACAGCTCTCACTCCCATTACTGCTAAACTTGGATTGCTT 6863428 Query 660 TACTTGCTCGTTGTTCGTGCTTTCATGGGAGTTGGAGAGG 699 | | | || |||||||||||||||||||| | || |||| Sbjct 6863429 TTCCTTCTTGTTGTTCGTGCTTTCATGGGTATCGGTGAGG 6863468 Score = 102 bits (112), Expect = 2e-19 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 435 GTGAATATGAGTATAGCTATACTTCCGATGTCAGCTGAGTATGGTTGGAATCCAGCAACA 494 || |||||||| || || |||||||| ||||||| ||| |||||| ||||| ||| Sbjct 6862805 GTAAATATGAGCATTGCCATACTTCCAATGTCAGTAAAGTTCAATTGGAACCCAGCGACA 6862864 Query 495 GTTGGTCTGATTCAGTCTTCTTTCTTCTGGGGTTACCTTCTTACACAGATA 545 || || ||||| ||||||||||| || ||||| ||||||||||| ||| || Sbjct 6862865 GTCGGCCTGATACAGTCTTCTTTTTTTTGGGGCTACCTTCTTACTCAGGTA 6862915 Score = 100 bits (110), Expect = 7e-19 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1261 AGATAATGCAAACAATAGGGTTTCTTGGACCAGCGTTCTTCCTAACACAGCTGAAACACA 1320 |||| ||||||||||| || |||||||| || || | ||||||||| ||| ||| || Sbjct 6865438 AGATCATGCAAACAATTGGATTTCTTGGTCCTGCTTGCTTCCTAACTCAGTTGAGCCATG 6865497 Query 1321 TAGATTCTCCTACAATGGCTGTTTTGTGCATGGCTTGTAGTCAGG 1365 | |||||||| |||||||||||||||| ||||| || || |||| Sbjct 6865498 TTAATTCTCCTGCAATGGCTGTTTTGTGTATGGCATGCAGCCAGG 6865542 Score = 96.9 bits (106), Expect = 8e-18 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 913 AGGCAGAGAGTTCACCATTAGAAGATCCAACATTGCTCCCTGAAGAAAGAAAGCTAATTG 972 ||||| | ||||| || | || ||||| || | ||||||| | ||||| || Sbjct 6863991 AGGCATATAGTTCTCCTCTTGAGGATCCTGAGCTGTTGTCTGAAGAGAAGAAGCTGATCC 6864050 Query 973 CAGACAACTGTGCTAGCAAAGAGCCAGTGAAGTCGATCCCGTGGAGGCTGATATTGTCGA 1032 |||| | | | ||| || || || || | || || ||| | || || ||||| | Sbjct 6864051 TTTCCAACAGCGTTTCCAAGGAACCTGTTAAAACAATACCTTGGGGACTAATTTTGTCAA 6864110 Query 1033 AACCACCGGTTTGGGCTCTCATCAGTTGC-CACTTTTGTCACAACTGGGGAACATTCATT 1091 ||||||| || ||||| || || ||| | ||||| |||||||| ||||||| ||| ||| Sbjct 6864111 AACCACCTGTATGGGCCCTAAT-AGTGTCTCACTTCTGTCACAATTGGGGAATATTTATT 6864169 Query 1092 CTCTTAACATGGATGCCAACTTATTACCATCAAGT 1126 || || |||||||||||||| || || | ||||| Sbjct 6864170 CTTTTGACATGGATGCCAACCTACTATAACCAAGT 6864204 Score = 69.8 bits (76), Expect = 1e-09 Identities = 70/90 (78%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 1363 AGGGGACTGATGCGTTTTCACAGTCTGGTCTATACTCTAACCATCAAGACATCGCTCCAA 1422 |||| |||||||| || |||||||||||| |||| || || |||||||| || || || Sbjct 6865862 AGGGTACTGATGCATTCTCACAGTCTGGTTTATATTCAAATCATCAAGATATTGCCCCTC 6865921 Query 1423 GATACTCTG-GAGTGTTACTTGGTTTGTCT 1451 |||| || | |||| ||| || || |||| Sbjct 6865922 GATATTCCGTGAGTATTAATTCTTTAGTCT 6865951 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1856 TTCTCAAGATTACTCAAAATCTCTCT 1881 ||||||| ||| |||||||||||||| Sbjct 10607613 TTCTCAAAATTTCTCAAAATCTCTCT 10607638 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1137 AACCTTATGGAGTCAGGACTTCTCT 1161 ||| ||||||| ||||||||||||| Sbjct 8755491 AACTTTATGGATTCAGGACTTCTCT 8755467 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 349 TCCTCCCATGGTGGGAAGAG 368 |||||||||||||||||||| Sbjct 16309718 TCCTCCCATGGTGGGAAGAG 16309737 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 147 bits (162), Expect = 5e-33 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 700 GTGTTGCAATGCCTGCTATGAATAATATATTGTCGAAGTGGGTTCCTGTGCAAGAGAGAA 759 ||||||| |||||||| |||||||| || |||| || |||||||| || |||||||| Sbjct 41006830 GTGTTGCTATGCCTGCCATGAATAACATTATGTCAAAATGGGTTCCAGTAGCAGAGAGAA 41006889 Query 760 GCAGATCACTCGCGCTTGTTTACAGCGGAATGTACCTTGGATCTGTCACCGGTTTAGCCT 819 | |||||| | || | || || || || |||||||||||||| ||||| | | |||| Sbjct 41006890 GTAGATCATTAGCATTGGTGTATAGTGGGATGTACCTTGGATCAGTCACTAGCCTGGCCT 41006949 Query 820 TTTCGCCTTTCTTGATTCATCAATTTGGATGGCCTTCTGTGTTTTATTCTTTCGGGTCTC 879 |||| | || || || || || ||||| ||||| || | || || || || || |||| Sbjct 41006950 TTTCACAATTTTTAATCCACCAGTTTGGTTGGCCATCAATCTTCTACTCCTTTGGTTCTC 41007009 Query 880 TTGGAACTGTATGGTTGACTCTGTGGCTAACTAAGG 915 | |||| || ||| | || ||||||||| ||||| Sbjct 41007010 TAAGAACAGTTTGGGTTTCTGTGTGGCTAAGTAAGG 41007045 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/36 (86%), Gaps = 3/36 (8%) Strand=Plus/Minus Query 88 CTCTTCTTTGCTCTTCA--AATA-TTCACTCTCTCT 120 ||||| ||||||||||| |||| ||| |||||||| Sbjct 11038398 CTCTTTTTTGCTCTTCAGTAATATTTCTCTCTCTCT 11038363 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 77.0 bits (84), Expect = 8e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 1020 CTGATATTGTCGAAACCACCGGTTTGGGCTCTCATCAGTTGC-CACTTTTGTCACAACTG 1078 ||||| ||||| |||||||| || ||| | || || ||| | || || | ||||||||| Sbjct 11201962 CTGATTTTGTCAAAACCACCTGTGTGGACCCTAAT-AGTGTCTCATTTCTATCACAACTG 11202020 Query 1079 GGGAACATTCATTCTCTTAACATGGATGCCAACTTATTA 1117 ||| ||||| |||| || ||||| ||||||||||| || Sbjct 11202021 GGGGACATTTTTTCTTTTGACATGAATGCCAACTTACTA 11202059 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1812 AAAGATATACAGATGATTTTTTGTAAATAAACAAA 1846 ||| ||||||| | |||||||||||| ||| ||| Sbjct 11207069 AAATATATACACAATATTTTTTGTAAAAAAATAAA 11207103 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 433 GAGTGAATATGAGTATAGCTATACTTCC 460 ||||||| ||||||||||||| || ||| Sbjct 24519344 GAGTGAAAATGAGTATAGCTAAACATCC 24519371 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 102 TCAAATATTCACTCTCTCTA 121 |||||||||||||||||||| Sbjct 28086831 TCAAATATTCACTCTCTCTA 28086850 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 41.0 bits (44), Expect = 0.54 Identities = 36/45 (80%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 1795 ATAATACTTTGTAGATGAAAGATATACAGATGATTTTTTGTAAAT 1839 ||| ||| ||||| || ||| ||||| | ||| ||||||||||| Sbjct 11882218 ATATTACATTGTATATAAAAAATATATATATGGATTTTTGTAAAT 11882262 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1835 TAAATAAACAAAGCTCACACTTTCT 1859 |||||||||||||||| | |||||| Sbjct 1769045 TAAATAAACAAAGCTCTCTCTTTCT 1769069 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 41.0 bits (44), Expect = 0.54 Identities = 38/47 (81%), Gaps = 1/47 (2%) Strand=Plus/Plus Query 1878 CTCTTCAGCTCTATATATATTTGTATCATAAAGATATTACACGCAAT 1924 |||| | |||||||||||| | ||| |||| |||| ||||| |||| Sbjct 34781055 CTCTATATCTCTATATATATATATATAATAATGATA-TACACACAAT 34781100 Score = 39.2 bits (42), Expect = 1.9 Identities = 31/37 (84%), Gaps = 3/37 (8%) Strand=Plus/Plus Query 1960 AAGAAAGAGTTTTCGAAACTTAAGGTCATAACTAAAA 1996 |||||||||||| ||| |||| |||||||||| || Sbjct 7773098 AAGAAAGAGTTTACGATACTT---GTCATAACTAGAA 7773131 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 1646 AAGACCTCTCATCAGGTGCAA-CTTCACCTCACGCCA 1681 || |||||||| | | |||| ||||||||||||||| Sbjct 69586 AAAACCTCTCAGGACGAGCAAACTTCACCTCACGCCA 69622 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2030 TTGTGAAGGAGGAAGAGGAG 2049 |||||||||||||||||||| Sbjct 18719200 TTGTGAAGGAGGAAGAGGAG 18719219 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 41.0 bits (44), Expect = 0.54 Identities = 34/42 (81%), Gaps = 0/42 (0%) Strand=Plus/Minus Query 1062 CACTTTTGTCACAACTGGGGAACATTCATTCTCTTAACATGG 1103 ||||||||||| | | | ||||| ||||||||||||||| Sbjct 11323634 CACTTTTGTCATTAAAGTAGTACATTTATTCTCTTAACATGG 11323593 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1637 TTCGGCTCCAAGACCTCTCATCAGGT 1662 ||||||| ||||||||||||||| || Sbjct 25714531 TTCGGCTTCAAGACCTCTCATCAAGT 25714506 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 1396 ACTCTAACCATCAAGACATCGCTCCAAGATA 1426 ||||||| |||||| |||||||||||||| Sbjct 7235534 ACTCTAAGTGTCAAGAAATCGCTCCAAGATA 7235504 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 161 CAGCCTCCGTAATCTCAAACCATCT 185 || ||||||||||||||||||| || Sbjct 5845325 CATCCTCCGTAATCTCAAACCAACT 5845301 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1104 ATGCCAACTTATTACCATCAAGTGCT 1129 ||||||| |||||||||||||| ||| Sbjct 14804387 ATGCCAAATTATTACCATCAAGGGCT 14804362 Score = 39.2 bits (42), Expect = 1.9 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1824 ATGATTTTTTGTAAATAAACAAAG 1847 ||||||||||||||||||| |||| Sbjct 18260886 ATGATTTTTTGTAAATAAATAAAG 18260863 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 349 TCCTCCCATGGTGGGAAGAG 368 |||||||||||||||||||| Sbjct 10236255 TCCTCCCATGGTGGGAAGAG 10236236 Score = 37.4 bits (40), Expect = 6.6 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Plus Query 1150 CAGGA-CTTCTCTCTGTATTTCCAT 1173 ||||| ||||||||||||||||||| Sbjct 27336514 CAGGAACTTCTCTCTGTATTTCCAT 27336538 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1576 GGAACCTATTTTCAACCGGAGAGAAGATAATC 1607 ||||||||||||||||| ||| |||||| || Sbjct 32007192 GGAACCTATTTTCAACCCAAGA-AAGATACTC 32007222 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 349 TCCTCCCATGGTGGGAAGAG 368 |||||||||||||||||||| Sbjct 17190583 TCCTCCCATGGTGGGAAGAG 17190602 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 349 TCCTCCCATGGTGGGAAGAG 368 |||||||||||||||||||| Sbjct 28764162 TCCTCCCATGGTGGGAAGAG 28764143 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1803 TTGTAGATGAAAGATATACAGATGATTTTT 1832 ||||| || || |||||||||||||| ||| Sbjct 5797475 TTGTACATTAATGATATACAGATGATGTTT 5797446 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1887 TCTATATATATTTGTATCATAAA 1909 ||||||||||||| ||||||||| Sbjct 9952918 TCTATATATATTTTTATCATAAA 9952940 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1794 AATAATACTTTGTAGATGAAAGA 1816 ||||||||||||||||| ||||| Sbjct 22882857 AATAATACTTTGTAGATTAAAGA 22882879 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 349 TCCTCCCATGGTGGGAAGAG 368 |||||||||||||||||||| Sbjct 18035237 TCCTCCCATGGTGGGAAGAG 18035218 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1889 TATATATATTTGTATCATAAAGATATTA 1916 ||||||||||| ||| ||| |||||||| Sbjct 14188459 TATATATATTTATATAATATAGATATTA 14188486 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1913 ATTACACGCAATTCTCTAAT 1932 |||||||||||||||||||| Sbjct 18201344 ATTACACGCAATTCTCTAAT 18201363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158629008031 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2