BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=2934 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr6D 334 2e-89 lcl|Jr6S 320 5e-85 lcl|Jr1D 223 1e-55 lcl|Jr8S 46.4 0.017 lcl|Jr8D 42.8 0.21 lcl|Jr7S 41.0 0.73 lcl|Jr5D 41.0 0.73 lcl|Jr3S 41.0 0.73 lcl|Jr2S 41.0 0.73 lcl|Jr2D 41.0 0.73 lcl|Jr7D 39.2 2.5 lcl|Jr5S 39.2 2.5 lcl|Jr4D 39.2 2.5 lcl|Jr3D 39.2 2.5 lcl|Jr1S 39.2 2.5 lcl|JrScfU0007 37.4 8.8 lcl|JrScfU0006 37.4 8.8 lcl|Jr4S 37.4 8.8 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 334 bits (370), Expect = 2e-89 Identities = 350/460 (76%), Gaps = 0/460 (0%) Strand=Plus/Plus Query 1012 CAGGATCCAGTGGTTGAGGCAATAAATAACGCGGTGGACAAGTTAACCTTCTCGACGAAT 1071 |||||||| || |||| ||||||| || ||||| | ||||||| ||| || ||| Sbjct 31969255 CAGGATCCTGTCATTGATTCAATAAAAGCAGCTGTGGATAGGTTAACCCACTCAACAAAT 31969314 Query 1072 TTCCTCAACTTCTTGGCACAACATGCTCTTATCATGCAAGATGATTTGGTGACTCCTTCA 1131 ||||||||||| ||||| |||||||| || || |||||||| || | |||||| Sbjct 31969315 TTCCTCAACTTTTTGGCGCAACATGCACTCATTATGCAAGACGAGCTACCTACTCCTGTT 31969374 Query 1132 GAGGATACAATCGATGAGCGGTCTTACCATTTTAATTCGTTACTCCTGAATCTAGGAAAC 1191 ||||| | | ||||| | | |||||||||| ||| | ||| |||| | | ||| Sbjct 31969375 GAGGAGCAAGTTGATGATCAGAAATACCATTTTATGTCGCTTCTCTTGAACTTGGTGAAC 31969434 Query 1192 ACATTTTTGTACATGGTCAACACTTATATCATCGTCCCTACAGCGGATGACTATTCGATG 1251 |||||| | || |||||||| || |||||| | ||||||||||| |||||||| || || Sbjct 31969435 ACATTTCTTTATATGGTCAATACATATATCGTTGTCCCTACAGCAGATGACTACTCCTTG 31969494 Query 1252 AGCCTTGGAGCTGCAGCAACGGTTTGTGGTGTTGTCATCGGATCTATGGCTGTGGCTCAA 1311 ||||||||||||||||| || ||||||||| |||| || || | |||||||| || ||| Sbjct 31969495 AGCCTTGGAGCTGCAGCGACAGTTTGTGGTATTGTGATTGGGGCAATGGCTGTTGCACAA 31969554 Query 1312 GTATTTTCATCGGTTTATTTCAGCGCATGGTCCAACAAATCTTACTTCAAACCTCTTGTG 1371 || ||||| ||||| ||||| || |||||||| || ||||| ||||||||||||||| | Sbjct 31969555 GTCTTTTCTTCGGTGTATTTTAGTGCATGGTCAAATAAATCATACTTCAAACCTCTTATA 31969614 Query 1372 TTTAGCAGCATCGCACTCTTTATCGGAAATTTGATGTATGCGTTGGCATATGATGCCAAT 1431 |||||||| | | || ||| | ||||| | |||| |||||||| |||||| || Sbjct 31969615 TTTAGCAGTGTAGTTCTTTTTGTGGGAAACATCTTGTACGCGTTGGCTTATGATCTTGAT 31969674 Query 1432 TCCATAGCGCTTCTTTTACTCGGCCGTGTCTGTTGTGGGT 1471 || |||||| ||||| || | || ||| | | ||||||| Sbjct 31969675 TCGATAGCGGTTCTTCTAATTGGGCGTCTTTTCTGTGGGT 31969714 Score = 206 bits (228), Expect = 8e-51 Identities = 207/269 (77%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 1474 GGATCAGCAAGAGCTGTTAACCGGAGATATATCAGCGATTGTGTGCCTTTGAGAATCCGA 1533 || || || |||||||| |||||||| ||||| || |||||||| || | | || |||| Sbjct 31970258 GGTTCTGCCAGAGCTGTCAACCGGAGGTATATTAGTGATTGTGTACCACTAAAAACCCGA 31970317 Query 1534 ATGCAGGCATCGGCGGGTTTTGTGAGTGCAAGTGCTCTTGGAATGGCTTGTGGCCCTGCG 1593 |||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct 31970318 ATGCAGGCGTCGGCAGGTTTTGTTAGTGCCAGTGCTCTTGGAATGGCTTGTGGTCCTGCC 31970377 Query 1594 CTTGCCGGTTTACTCCAAATCAAATTCAAGTTTTACAAGTTTACATTTAACCAATCTACT 1653 || || ||||| || |||| || |||||| | |||||| |||| || || ||| || Sbjct 31970378 CTGGCTGGTTTGCTTCAAACTAATTTCAAGATCTACAAGCTTACTTTCAATCAAAACACC 31970437 Query 1654 TTGCCGGGATGGGTTATGGCTGTGGCTTGGCTGTTCTATTTGGTATGGCTATGCATTTCA 1713 |||| || |||||||||||||| ||||||| | || || | ||| | | || ||| Sbjct 31970438 CTGCCTGGCTGGGTTATGGCTGTTACTTGGCTAATATACTTAATTTGGTTGGGGATCTCA 31970497 Query 1714 TTCAGAGAGCCGTTGCGTGACACAGAGGA 1742 || | ||| || | ||||| || || || Sbjct 31970498 TTTAAAGAACCTTCTCGTGAAACTGAAGA 31970526 Score = 161 bits (178), Expect = 3e-37 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1955 TTAAGGTTCAACTGTTGATCTACTTCATGCTCAAATATTCGATGGAAATATTACTGTCAG 2014 || ||||||| |||||||| || |||||||||||||| |||||| || ||| | |||| Sbjct 31972235 TTCAGGTTCAGCTGTTGATATATTTCATGCTCAAATACGTGATGGAGATTTTAATTTCAG 31972294 Query 2015 AATCAAGTGTCATTACTTCATACTACTTTAGTTGGACAACAAGCTCTGTTGCCATCTTCC 2074 |||||||||| |||| ||||||||||| ||| | |||||| ||| || || || | Sbjct 31972295 AATCAAGTGTTGTTACCACATACTACTTTCAGTGGTCTACAAGCAGTGTGGCGATTTTTC 31972354 Query 2075 TGGCCTGCCTTGGCCTCACGGTGCTACCAATCAACATTTTGGTCGGAAGTTACATCAGTA 2134 | || | |||||||||||||| || ||| | || ||| | | |||| ||||| || | Sbjct 31972355 TTGCTTCTCTTGGCCTCACGGTTCTTCCAGTTAATATTGTTATAGGAAACTACATTAGCA 31972414 Query 2135 ATATGTTTGAAGACAGG 2151 ||||||||||||||||| Sbjct 31972415 ATATGTTTGAAGACAGG 31972431 Score = 143 bits (158), Expect = 8e-32 Identities = 223/319 (70%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 592 TTGCAGATTGAGACAACTGTCCTTTTCATGTTGGAACAACAAGGGTTGCTTTCAGGGCGA 651 || ||||| |||| | ||||||||| |||||||||| |||||| | ||| || | | Sbjct 31968551 TTTCAGATCGAGAAGATTGTCCTTTTTCTGTTGGAACAGCAAGGGCTACTTGCAAGCAGG 31968610 Query 652 TTAGCCAAATTGAGGGAATCTCATGATGCTATACTTGAGCAGCCTGACATATCAAGAATT 711 |||| | | ||| || || | | |||||||||| ||||| ||| Sbjct 31968611 CTAGCTATGCTTGCTGAACACAATAATACCCCTCAGCAGCAGCCTGAAATATCCCAAATA 31968670 Query 712 TTCGAGCTACGTGAAGCATACAGAGATGTTGGACGAGACCTTCTTCAGCTCCTGAAATTC 771 | || || | ||||| || |||| || |||| | || | |||| || || Sbjct 31968671 TCGGAATTAAGAGAAGCTTATAGAGCAGTGGGACAGCATCTGTTAAAGCTTCTCTTTTTT 31968730 Query 772 GTTGAGTTGAACGCCATTGGTCTGCGCAAGATACTTAAGAAATTCGACAAAAGGTTTGGA 831 |||||| | || || ||||||||||| |||||||| ||||| || || ||| | ||||| Sbjct 31968731 GTTGAGATAAATGCTATTGGTCTGCGGAAGATACTGAAGAAGTTTGATAAACGTTTTGGT 31968790 Query 832 TATAGATTCGCTGATTATTACGTGAAGACCCGCGCTAATCACCCTTACTCTCAGCTTCAA 891 || ||||| || ||| ||| || || || || || ||||| ||||| |||||||| || Sbjct 31968791 TACAGATTGACTAATTCTTATGTCAAAACACGTGCAAATCATCCTTATTCTCAGCTGCAG 31968850 Query 892 CAAGTTTTTAAGCATGTGG 910 ||||| || |||||||||| Sbjct 31968851 CAAGTGTTCAAGCATGTGG 31968869 Score = 125 bits (138), Expect = 2e-26 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 2283 AGGTGTGAATCTATCGTTGTTATCGCGGGTAATGTCATCAAGGCTATCGAAAGGAACGTA 2342 |||||| ||||| | | | || || || ||||| || ||||||| ||||| | Sbjct 31973186 AGGTGTCAATCTGGCACTCCTCTCACGCGTCATGTCGTCCCGGCTATCCCGTGGAACCTT 31973245 Query 2343 CAACGGAGGATTGCTCTCAACAGAAGCTGGAACGTTGGCTCGTGTTGTGGCAGATGCAAC 2402 ||||| ||| | |||||||||||||| || || | || || || |||||||||| || Sbjct 31973246 TAACGGTGGACTACTCTCAACAGAAGCAGGGACAATCGCACGAGTGGTGGCAGATGGCAC 31973305 Query 2403 CATAACATTGGGAGGATA-TTTGGGAAGAGGCCATCTCCTGAATGCCACTCTTCTACCAT 2461 |||||||||| || || || ||| ||| | | || |||||| ||| || || || | Sbjct 31973306 GATAACATTGGCTGGGTACTTGGGGGAGA-GTAAACTGTTGAATGTCACCCTGCTTCCTT 31973364 Query 2462 CACTTGTCATCTGCATTGGCTCCATCGTTGCTACTTGTTGTACTTATAACTCACTCTATT 2521 |||| |||| ||||| ||||||| |||| || || | || || ||||| ||||||| Sbjct 31973365 CACTCTTCATTTGCATATCCTCCATCTTTGCCACCTGCTTCACCTACAACTCTCTCTATT 31973424 Query 2522 GAT 2524 || Sbjct 31973425 AAT 31973427 Score = 77.0 bits (84), Expect = 1e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 451 TATTATATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATGCTGAACAAATCCAA 510 ||||||||||| || ||| | |||||||| || || |||||||||||| ||||||| || Sbjct 31967686 TATTATATCAACTATAAACTCATGAAGAAAAAGGTAAAGCAATATGCTCAACAAATTGAA 31967745 Query 511 GGCGGATCTCAACATCCTCGCCATGTTCTCAAAGATTTCTCGAGGATGCTCGATA 565 | || ||| ||| | ||||| || || || ||||| || ||| | |||| Sbjct 31967746 GTTGGGATACAAGATCGCAGGCATGTACTAAAGGACTTCTCAAGAATGTTAGATA 31967800 Score = 77.0 bits (84), Expect = 1e-11 Identities = 72/92 (78%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 916 GGAGCTGTTGTTGGAGCAATTTCCCGCAATCTTCATGAGCTTCAAGAAAATGAAGGAAGC 975 |||||||| || ||||| || || |||||||||||||| ||||| || | ||||||| Sbjct 31968998 GGAGCTGTCGTGGGAGCCATATCACGCAATCTTCATGAACTTCAGGACCGTCAAGGAAGT 31969057 Query 976 TTTTATTCAATTTATGACCAACCCGTTCTTCC 1007 | | ||||| ||||| ||||| | |||||| Sbjct 31969058 TACTTATCAATATATGATCAACCTGCTCTTCC 31969089 Score = 55.4 bits (60), Expect = 3e-05 Identities = 104/151 (69%), Gaps = 19/151 (13%) Strand=Plus/Plus Query 1825 CCGTTGCTGATCACTTCAGGAATCAAGCCAGAAGATGAAGAG---------GAATGCGAT 1875 || ||||| | | ||||| | ||||| | |||||||||| ||| | ||| Sbjct 31970970 CCATTGCTTACTAGTTCAGAAGACAAGCAACAAGATGAAGATAGTGAGCAAGAACGTGAT 31971029 Query 1876 GAAAGTGAAGAA---TCCCCAGAAGATTCTCACAAACCTGCAAATTC--TTTCATAGAAG 1930 |||||||||||| || |||||| |||||| ||| || | ||| || || | | Sbjct 31971030 GAAAGTGAAGAAGCTTCTCCAGAA---TCTCACGGACCAGCTACTTCAATTCGATCG--G 31971084 Query 1931 CATACCGACTCCTTACTCCATCTGTTAAGGT 1961 |||| |||| ||||| || ||||| ||||| Sbjct 31971085 CATATAGACTACTTACACCCTCTGTAAAGGT 31971115 Score = 41.0 bits (44), Expect = 0.73 Identities = 41/51 (80%), Gaps = 2/51 (4%) Strand=Plus/Minus Query 2885 ATATATCTGTTTATCTGACTTTG-ACATATACATAAATTAGATATTTTAAT 2934 |||||| | | |||||||||||| ||| ||| || ||||| || |||||| Sbjct 24707491 ATATATATATATATCTGACTTTGTACAGATATAT-AATTACTTAATTTAAT 24707442 Score = 41.0 bits (44), Expect = 0.73 Identities = 41/51 (80%), Gaps = 2/51 (4%) Strand=Plus/Minus Query 2885 ATATATCTGTTTATCTGACTTTG-ACATATACATAAATTAGATATTTTAAT 2934 |||||| | | |||||||||||| ||| ||| || ||||| || |||||| Sbjct 24707545 ATATATATATATATCTGACTTTGTACAGATATAT-AATTACTTAATTTAAT 24707496 Score = 41.0 bits (44), Expect = 0.73 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 2744 AAATTCTCATATAAATTTATAAGTTTTTAT 2773 |||||||| | ||||||||||| ||||||| Sbjct 27829110 AAATTCTCGTCTAAATTTATAATTTTTTAT 27829139 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 8581639 TAAAAATTTCACATATAAATTTATAATTTTATAT 8581606 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 13516337 TAAAAATTTCACATATAAATTTATAAATTTATAT 13516304 Score = 39.2 bits (42), Expect = 2.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 2906 TGACATATACATAAATTAGATATTTTAAT 2934 ||||||||||||||| || |||| ||||| Sbjct 17891580 TGACATATACATAAAATATATATATTAAT 17891608 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 24121184 TAAAAATTTCACATATAAATTTATAATTTTATAT 24121217 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 2750 TCATATAAATTTATAAGTTTTTATTT 2775 ||||||||||||||||| |||| ||| Sbjct 35652272 TCATATAAATTTATAAGATTTTTTTT 35652247 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2727 TTCTGAAGTATTGTAATAAATTCTCATATA 2756 |||| ||||||| ||| | ||||||||||| Sbjct 12747138 TTCTCAAGTATTCTAAGATATTCTCATATA 12747109 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 320 bits (354), Expect = 5e-85 Identities = 349/461 (76%), Gaps = 2/461 (0%) Strand=Plus/Plus Query 1012 CAGGATCCAGTGGTTGAGGCAATAAATAACGCGGTGGACAAGTTAACCTTCTCGACGAAT 1071 |||||||| || ||||| |||||| || ||||||| || || ||| || ||| Sbjct 21250705 CAGGATCCTGTCGTTGACTCAATAAGAGCAGCCGTGGACAGATTGACTCACTCAACAAAT 21250764 Query 1072 TTCCTCAACTTCTTGGCACAACATGCTCTTATCATGCAAGATGATTTGGTGACTCCTTCA 1131 ||||||||||| ||||| ||||||||||| || ||||||||||| || ||||| Sbjct 21250765 TTCCTCAACTTTTTGGCGCAACATGCTCTCATTATGCAAGATGAGCTGCCTACTCCCATT 21250824 Query 1132 GAGGATACAA-TCGATGAGCGGTCTTACCATTTTAATTCGTTACTCCTGAATCTAGGAAA 1190 ||||| |||| | ||||| | | |||||||||| || | ||| |||| | | || Sbjct 21250825 GAGGA-ACAAGTTGATGATCAGAAATACCATTTTATATCACTTCTCTTGAACTTGGCCAA 21250883 Query 1191 CACATTTTTGTACATGGTCAACACTTATATCATCGTCCCTACAGCGGATGACTATTCGAT 1250 ||||||| | || |||||||| || ||||| | || |||||||| |||||||| || | Sbjct 21250884 CACATTTCTTTATATGGTCAATACATATATTGTTGTTCCTACAGCAGATGACTACTCCTT 21250943 Query 1251 GAGCCTTGGAGCTGCAGCAACGGTTTGTGGTGTTGTCATCGGATCTATGGCTGTGGCTCA 1310 ||||||||||||||||||||| ||||||||| |||| || || | ||||| || || || Sbjct 21250944 GAGCCTTGGAGCTGCAGCAACAGTTTGTGGTATTGTGATTGGTGCAATGGCAGTTGCCCA 21251003 Query 1311 AGTATTTTCATCGGTTTATTTCAGCGCATGGTCCAACAAATCTTACTTCAAACCTCTTGT 1370 || ||||| ||||| ||||| || |||||||| || ||||| |||||| |||||||||| Sbjct 21251004 GGTGTTTTCTTCGGTGTATTTTAGTGCATGGTCAAATAAATCATACTTCCAACCTCTTGT 21251063 Query 1371 GTTTAGCAGCATCGCACTCTTTATCGGAAATTTGATGTATGCGTTGGCATATGATGCCAA 1430 |||||||| || || || || | ||||| ||||||| ||||| |||||| || Sbjct 21251064 ATTTAGCAGTATAGCTCTTCTTGTGGGAAACACCTTGTATGCATTGGCTTATGATCTTAA 21251123 Query 1431 TTCCATAGCGCTTCTTTTACTCGGCCGTGTCTGTTGTGGGT 1471 ||| |||||| |||| || | ||||| | | ||||||| Sbjct 21251124 TTCGATAGCGGTTCTCCTAATTGGCCGCCTTTTCTGTGGGT 21251164 Score = 232 bits (256), Expect = 2e-58 Identities = 208/261 (80%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 1464 TTGTGGGTTGGGATCAGCAAGAGCTGTTAACCGGAGATATATCAGCGATTGTGTGCCTTT 1523 |||| | ||||| || |||||||||||||||||||| |||||||| |||||||| ||| | Sbjct 21252080 TTGTAGATTGGGTTCTGCAAGAGCTGTTAACCGGAGGTATATCAGTGATTGTGTACCTCT 21252139 Query 1524 GAGAATCCGAATGCAGGCATCGGCGGGTTTTGTGAGTGCAAGTGCTCTTGGAATGGCTTG 1583 || |||||| ||||||||||| || | |||||| ||||| ||||||||||||||||| || Sbjct 21252140 GAAAATCCGCATGCAGGCATCAGCAGCTTTTGTTAGTGCCAGTGCTCTTGGAATGGCCTG 21252199 Query 1584 TGGCCCTGCGCTTGCCGGTTTACTCCAAATCAAATTCAAGTTTTACAAGTTTACATTTAA 1643 ||| ||||| || || ||||| || |||| || || | | | |||||| ||||||| || Sbjct 21252200 TGGTCCTGCTCTAGCTGGTTTGCTTCAAACTAATTTTAGGATCTACAAGCTTACATTCAA 21252259 Query 1644 CCAATCTACTTTGCCGGGATGGGTTATGGCTGTGGCTTGGCTGTTCTATTTGGTATGGCT 1703 ||| || ||||| || |||||||||||||| |||||||| | || || | ||| | Sbjct 21252260 TCAAGACACCTTGCCTGGCTGGGTTATGGCTGTTGCTTGGCTAATATACTTAATTTGGTT 21252319 Query 1704 ATGCATTTCATTCAGAGAGCC 1724 || || ||||| | ||| || Sbjct 21252320 GTGTATCTCATTTAAAGAACC 21252340 Score = 206 bits (228), Expect = 8e-51 Identities = 245/328 (75%), Gaps = 3/328 (1%) Strand=Plus/Plus Query 584 ATCATTGTTTGCAGATTGAGACAACTGTCCTTTTCATGTTGGAACAACAAGGGTTGCTTT 643 || ||| ||| |||||||||| | ||||||||| ||||||||||||||||| | || Sbjct 21250017 ATAATTATTT-CAGATTGAGAAGATTGTCCTTTTTCTGTTGGAACAACAAGGGATACTAG 21250075 Query 644 CAGGGCGATTAGCCAA-ATTGAGGGAATCTCATGATGCTATACTTGAGCAGCCTGACATA 702 || | | ||||| || |||| ||| |||||| | | | |||| ||||| || Sbjct 21250076 CAAGCAGGTTAGCTAAGCTTGA-TGAACAGCATGATTCCCTTCAGCAGCAACCTGATATG 21250134 Query 703 TCAAGAATTTTCGAGCTACGTGAAGCATACAGAGATGTTGGACGAGACCTTCTTCAGCTC 762 || ||| | || |||| ||||| || |||| || |||||||| ||| | |||| Sbjct 21250135 TCTCAAATATCTGAATTACGAGAAGCTTATAGAGCAGTGGGACGAGATCTTTTAAAGCTT 21250194 Query 763 CTGAAATTCGTTGAGTTGAACGCCATTGGTCTGCGCAAGATACTTAAGAAATTCGACAAA 822 || || |||||| | ||||| ||||||||||| |||||||| ||||| || || ||| Sbjct 21250195 CTCTTTTTTGTTGAGATAAACGCTATTGGTCTGCGGAAGATACTGAAGAAGTTTGATAAA 21250254 Query 823 AGGTTTGGATATAGATTCGCTGATTATTACGTGAAGACCCGCGCTAATCACCCTTACTCT 882 | || || ||||||||| || |||||||||| || || || || ||||| |||||||| Sbjct 21250255 CGCTTCGGTTATAGATTCACTAATTATTACGTCAAAACACGTGCAAATCATCCTTACTCC 21250314 Query 883 CAGCTTCAACAAGTTTTTAAGCATGTGG 910 ||||| || ||||| || |||||||||| Sbjct 21250315 CAGCTGCAGCAAGTGTTCAAGCATGTGG 21250342 Score = 167 bits (184), Expect = 7e-39 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1958 AGGTTCAACTGTTGATCTACTTCATGCTCAAATATTCGATGGAAATATTACTGTCAGAAT 2017 ||||||| ||||||| || ||||||||||||||| ||||| || ||||| ||||||| Sbjct 21253644 AGGTTCAGTTGTTGATATATTTCATGCTCAAATATGTAATGGAGATTTTACTTTCAGAAT 21253703 Query 2018 CAAGTGTCATTACTTCATACTACTTTAGTTGGACAACAAGCTCTGTTGCCATCTTCCTGG 2077 ||||||| ||||| ||||||||||| ||| | || ||| | || || || || || | Sbjct 21253704 CAAGTGTTATTACCACATACTACTTTCACTGGTCTACGAGCACAGTGGCAATTTTTCTTG 21253763 Query 2078 CCTGCCTTGGCCTCACGGTGCTACCAATCAACATTTTGGTCGGAAGTTACATCAGTAATA 2137 | | ||||||||| || || || ||| | ||||| | || |||| |||||| || |||| Sbjct 21253764 CTTCCCTTGGCCTGACAGTTCTTCCAGTAAACATCGTTGTTGGAAATTACATTAGCAATA 21253823 Query 2138 TGTTTGAAGACAGGCAA 2154 |||||||||||||| || Sbjct 21253824 TGTTTGAAGACAGGTAA 21253840 Score = 125 bits (138), Expect = 2e-26 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 2309 GGGTAATGTCATCAAGGCTATCGAAAGGAACGTACAACGGAGGATTGCTCTCAACAGAAG 2368 |||| |||||||| |||| || ||||| || || || ||| | || |||||||||| Sbjct 21255359 GGGTCATGTCATCCCGGCTTTCCCGTGGAACCTATAATGGTGGACTACTTTCAACAGAAG 21255418 Query 2369 CTGGAACGTTGGCTCGTGTTGTGGCAGATGCAACCATAACATTGGGAGGATATTTGGG-A 2427 |||| || | || || || | ||||||| || ||||| ||| ||||| ||||| Sbjct 21255419 CTGGGACAATTGCACGAGTGATTGCAGATGGCACGATAACTATGGCTGGATACTTGGGTC 21255478 Query 2428 AGAGGCCATCTCCTGAATGCCACTCTTCTACCATCACTTGTCATCTGCATTGGCTCCATC 2487 |||| | ||| |||||| ||| || || || ||||| |||| |||||| |||||| Sbjct 21255479 AGAGTAGA-CTCTTGAATGTCACCCTACTTCCTTCACTCTTCATTTGCATTTCCTCCATT 21255537 Query 2488 GTTGCTACTTGTTGTACTTATAACTCACTCTATTGATT 2525 ||||| || || | || || ||||| ||||||||||| Sbjct 21255538 GTTGCCACCTGCTTAACGTACAACTCTCTCTATTGATT 21255575 Score = 57.2 bits (62), Expect = 9e-06 Identities = 70/93 (75%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 916 GGAGCTGTTGTTGGAGCAATTTCCCGCAATCTTCATGAGCTTCAAGAAAATG-AAGGAAG 974 || |||||||| ||||| | || || ||||||||||| |||| |||| | | ||||| Sbjct 21250451 GGGGCTGTTGTGGGAGCTGTATCGCGAAATCTTCATGAACTTC-AGAATCGGCAGGGAAG 21250509 Query 975 CTTTTATTCAATTTATGACCAACCCGTTCTTCC 1007 || | || || ||||| ||||| | |||||| Sbjct 21250510 CTACTTATCGATATATGATCAACCTGCTCTTCC 21250542 Score = 55.4 bits (60), Expect = 3e-05 Identities = 69/95 (73%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 1867 GAATGCGATGAAAGTGAAGAATCCCCAGAAGATTCTCACAAACCTGCAAATTCTTTCATA 1926 ||||| ||||||||||||||| | | || || |||| | ||| || | ||| | | Sbjct 21252830 GAATGTGATGAAAGTGAAGAAGCTTCTGAGGAATCTCGCCGACCAGCTACTTCAATTCGA 21252889 Query 1927 GAAGCATACCGACTCCTTACTCCATCTGTTAAGGT 1961 |||||| |||| ||||| || ||||| ||||| Sbjct 21252890 TCAGCATATAGACTACTTACACCCTCTGTGAAGGT 21252924 Score = 41.0 bits (44), Expect = 0.73 Identities = 42/55 (76%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 2709 AGTTTTGTGAGATTCTTTTTCTGAAGTATTGTAATAAATTCTCATATAAATTTAT 2763 |||||| | ||||| || | | | |||| ||||||||||| ||||| ||||| Sbjct 13614969 AGTTTTATCAGATTTTTATATTTATTTATTTTAATAAATTCTATTATAACTTTAT 13615023 Score = 41.0 bits (44), Expect = 0.73 Identities = 38/48 (79%), Gaps = 3/48 (6%) Strand=Plus/Plus Query 2728 TCTGAAGTATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||||| |||| || |||| ||||||||||||||||||| | ||| Sbjct 15457836 TCTGACATATTATATCAAAT---CATATAAATTTATAAGTTTATTTTT 15457880 Score = 41.0 bits (44), Expect = 0.73 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Minus Query 2742 ATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 |||| || | ||||||||| |||||||||||| Sbjct 17360182 ATAAGTTTTTATATAAATTGATAAGTTTTTAT 17360151 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 779048 TAAAAATTTCACATATAAATTTATAATTTTATAT 779081 Score = 39.2 bits (42), Expect = 2.5 Identities = 50/67 (75%), Gaps = 3/67 (4%) Strand=Plus/Minus Query 2724 TTTTTCTGAAGTATTGTAATAAATTCTCATATAAATTTATAAGTTT-TTATTTGGTATCT 2782 |||||| |||||||||||| || | || | | | ||||| ||| ||||||| | | Sbjct 8368707 TTTTTCAAAAGTATTGTAAT--TTTTTAATTTTAGTATATAATTTTATTATTTGTTTGTT 8368650 Query 2783 GCTTTTA 2789 ||||||| Sbjct 8368649 GCTTTTA 8368643 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 8543284 TAAAAATTTCACATATAAATTTATAATTTTATAT 8543251 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 2750 TCATATAAATTTATAAGTTTTTATTT 2775 |||||||||||||||||||| | ||| Sbjct 22906064 TCATATAAATTTATAAGTTTATTTTT 22906039 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 23207120 TAAAAATTTCACATATAAATTTATAAATTTATAT 23207087 Score = 37.4 bits (40), Expect = 8.8 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2756 AAATTTATAAGTTTTTATTT 2775 |||||||||||||||||||| Sbjct 15762086 AAATTTATAAGTTTTTATTT 15762067 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 476 AGAAGAAAGTGAAGCAATATGCTGAACAAATC 507 ||||||||||||||||| ||| |||| |||| Sbjct 22057436 AGAAGAAAGTGAAGCAA-ATGAAGAACCAATC 22057466 Score = 37.4 bits (40), Expect = 8.8 Identities = 45/60 (75%), Gaps = 5/60 (8%) Strand=Plus/Plus Query 2735 TATTGTA-ATAAATTCTCATATAAATTTATAAGTTTTTATTTGGTATCTGCTTTTATATA 2793 |||| || ||| ||| |||||||||||||| ||| ||| || || ||||||||| Sbjct 23207069 TATTATATATATATTAATATATAAATTTATAAATTTATATGTGAAAT----TTTTATATA 23207124 Score = 37.4 bits (40), Expect = 8.8 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2755 TAAATTTATAAGTTTTTATT 2774 |||||||||||||||||||| Sbjct 23512351 TAAATTTATAAGTTTTTATT 23512370 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2904 TTTGACATATACATAAATTAGATATTTT 2931 |||||||||||||||||| | |||||| Sbjct 24312811 TTTGACATATACATAAATGTGGTATTTT 24312784 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 223 bits (246), Expect = 1e-55 Identities = 298/413 (72%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 1062 CTCGACGAATTTCCTCAACTTCTTGGCACAACATGCTCTTATCATGCAAGATGATTTGGT 1121 ||| || |||| ||| |||| |||| | ||| || |||||||| | || || ||| Sbjct 47181982 CTCAACAAATTACCTACACTTTTTGGGAAGACACGCCTTTATCATGGAGGACGACTTGCC 47182041 Query 1122 GACTCCTTC---AGAGGATACAATCGATGAGCGGTCTTACCATTTTAATTCGTTACTCCT 1178 ||||| || ||| ||||| | ||| | | || ||||||| || | ||||| Sbjct 47182042 AACTCCATCTCAAGATGATACT---GCTGACCAGAGATATCATTTTATGTCACTTCTCCT 47182098 Query 1179 GAATCTAGGAAACACATTTTTGTACATGGTCAACACTTATATCATCGTCCCTACAGCGGA 1238 ||| | | |||||||||| | || ||||||||||| || ||||| || || ||||| || Sbjct 47182099 GAACTTGGTAAACACATTTCTATATATGGTCAACACATACATCATAGTTCCGACAGCAGA 47182158 Query 1239 TGACTATTCGATGAGCCTTGGAGCTGCAGCAACGGTTTGTGGTGTTGTCATCGGATCTAT 1298 ||| || |||||||||||||||||||||| || ||||| ||||| || || ||||| Sbjct 47182159 CAGCTACTCCTTGAGCCTTGGAGCTGCAGCAACAGTCTGTGGAGTTGTGATAGGGTCTAT 47182218 Query 1299 GGCTGTGGCTCAAGTATTTTCATCGGTTTATTTCAGCGCATGGTCCAACAAATCTTACTT 1358 |||||| ||||| || ||||| || |||||||| || |||||||| || | ||| ||||| Sbjct 47182219 GGCTGTTGCTCAGGTGTTTTCTTCAGTTTATTTTAGTGCATGGTCAAATAGATCGTACTT 47182278 Query 1359 CAAACCTCTTGTGTTTAGCAGCATCGCACTCTTTATCGGAAATTTGATGTATGCGTTGGC 1418 || || ||||| ||||| || | | || || | ||||| | ||||| |||| Sbjct 47182279 CAGGCCCCTTGTATTTAGTAGTGTTGTCCTTCTTGTGGGAAACACCTTATATGCTCTGGC 47182338 Query 1419 ATATGATGCCAATTCCATAGCGCTTCTTTTACTCGGCCGTGTCTGTTGTGGGT 1471 |||||| ||||| ||| | ||||| | | || || ||| ||||||| Sbjct 47182339 TTATGATCTGAATTCAATATCTGTTCTTCTGATTGGTCGGCTCTTCTGTGGGT 47182391 Score = 165 bits (182), Expect = 3e-38 Identities = 190/256 (74%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1469 GGTTGGGATCAGCAAGAGCTGTTAACCGGAGATATATCAGCGATTGTGTGCCTTTGAGAA 1528 |||| || || ||||| ||||||||| || | |||||||| |||||||| || | | | Sbjct 47182939 GGTTAGGTTCTGCAAGGGCTGTTAACAGGCGTTATATCAGTGATTGTGTACCGCTCAAAT 47182998 Query 1529 TCCGAATGCAGGCATCGGCGGGTTTTGTGAGTGCAAGTGCTCTTGGAATGGCTTGTGGCC 1588 | |||||||||| || || |||||||| ||||| ||||| ||||||||||| ||||| | Sbjct 47182999 TGAGAATGCAGGCGTCTGCAGGTTTTGTAAGTGCGAGTGCGCTTGGAATGGCATGTGGTC 47183058 Query 1589 CTGCGCTTGCCGGTTTACTCCAAATCAAATTCAAGTTTTACAAGTTTACATTTAACCAAT 1648 | || ||| | ||||||| || | || || ||| ||| || |||| || || | Sbjct 47183059 CAGCTCTTTCTTGTTTACTACAGACGAATTTTAAGATTTCAAAACTTACTTTCAATGAGG 47183118 Query 1649 CTACTTTGCCGGGATGGGTTATGGCTGTGGCTTGGCTGTTCTATTTGGTATGGCTATGCA 1708 ||| ||||| || ||| ||||| | | || ||||| |||| || | ||| |||| | Sbjct 47183119 ATACATTGCCTGGTTGGCTTATGAGTCTTGCGTGGCTTGTCTACTTATTGTGGTTATGGA 47183178 Query 1709 TTTCATTCAGAGAGCC 1724 |||| || |||||||| Sbjct 47183179 TTTCTTTTAGAGAGCC 47183194 Score = 143 bits (158), Expect = 8e-32 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 1958 AGGTTCAACTGTTGATCTACTTCATGCTCAAATATTCGATGGAAATATTACTGTCAGAAT 2017 |||||||||| || | || || |||||||||||| | ||||| || ||||| | |||| Sbjct 47184380 AGGTTCAACTATTTGTGTATTTTATGCTCAAATATGCCATGGAGATTTTACTTGCTGAAT 47184439 Query 2018 CAAGTGTCATTACTTCATACTACTTTAGTTGGACAACAAGCTCTGTTGCCATCTTCCTGG 2077 |||||||||| ||| ||| || |||| |||||||| ||| ||| || ||||| || | Sbjct 47184440 CAAGTGTCATCACTGGATATTATTTTATTTGGACAAGCAGCAGTGTGGCAATCTTTCTTG 47184499 Query 2078 CCTGCCTTGGCCTCACGGTGCTACCAATCAACATTTTGGTCGGAAGTTACATCAGTAATA 2137 | || || || || || ||||| ||| | |||||| | || |||| || ||| | || | Sbjct 47184500 CATGTCTCGGGCTAACAGTGCTTCCAGTAAACATTATTGTTGGAAACTATATCGGCAACA 47184559 Query 2138 TGTTTGAAGACAGG 2151 |||||||||| ||| Sbjct 47184560 TGTTTGAAGAAAGG 47184573 Score = 141 bits (156), Expect = 3e-31 Identities = 226/321 (70%), Gaps = 10/321 (3%) Strand=Plus/Plus Query 595 CAGATTGAGACAACTGTCCTTTTCATGTTGGAACAACAAGGG----TTGCTTTCAGGGCG 650 ||||| || | | |||||||||| || | |||||||||||| ||||| |||| Sbjct 47180915 CAGATCGAAAGGATTGTCCTTTTCCTGCTAGAACAACAAGGGCAACTTGCTACCAGG--- 47180971 Query 651 ATTAGCCAAATTGAGGGAATCTCATGATGCTATACTTGAGCAGCCTGACATATCAAGAAT 710 ||| | | | || || || ||||| | | ||||||| || ||||||||| Sbjct 47180972 -TTATCTGACCTTAGAGAGCAGCAGCATGCTCTTTTACAGCAGCCAGATGGATCAAGAAT 47181030 Query 711 TTTCGAGCTACGTGAAGCATACAGAGATGTTGGACGAGACCTTCTTCAG-CTCCTGAAAT 769 | || ||| |||||||| |||| |||||| | || ||| || || || || | Sbjct 47181031 ATCTGAATTACAGGAAGCATATAGAGCAGTTGGATGTGATCTT-TTAAGACTTCTCTCTT 47181089 Query 770 TCGTTGAGTTGAACGCCATTGGTCTGCGCAAGATACTTAAGAAATTCGACAAAAGGTTTG 829 | |||||| | || ||||||||| | || |||||| | || ||||| || || |||||| Sbjct 47181090 TTGTTGAGATCAATGCCATTGGTTTACGTAAGATATTGAAAAAATTTGATAAGCGGTTTG 47181149 Query 830 GATATAGATTCGCTGATTATTACGTGAAGACCCGCGCTAATCACCCTTACTCTCAGCTTC 889 | |||| ||| | | || || || || || || || || || |||||||| ||||| | Sbjct 47181150 GTTATAAGTTCACCAACTACTATGTCAAAACTCGTGCAAACCATCCTTACTCCCAGCTGC 47181209 Query 890 AACAAGTTTTTAAGCATGTGG 910 ||||||||| |||||||||| Sbjct 47181210 GACAAGTTTTCAAGCATGTGG 47181230 Score = 132 bits (146), Expect = 1e-28 Identities = 180/245 (73%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 2283 AGGTGTGAATCTATCGTTGTTATCGCGGGTAATGTCATCAAGGCTATCGAAAGGAACGTA 2342 ||||||||| |||| | |||| || || |||||||||||||| || || ||||| Sbjct 47185708 AGGTGTGAACTTATCACTCCTATCTCGTGTCATGTCATCAAGGCTTTCCCGTGGCACGTA 47185767 Query 2343 CAACGGAGGATTGCTCTCAACAGAAGCTGGAACGTTGGCTCGTGTTGTGGCAGATGCAAC 2402 ||| || ||| |||| || |||||||| || || ||||||| ||| | ||||||| || Sbjct 47185768 CAATGGTGGACTGCTTTCCACAGAAGCCGGGACCCTGGCTCGAGTTATTGCAGATGGTAC 47185827 Query 2403 CATAACATTGGGAGGATATTTGGG-AAGAGGCCATCTCCTGAATGCCACTCTT--CTACC 2459 |||||| || || |||||||| |||| | ||| ||||| ||| ||| || || Sbjct 47185828 AATAACACTGTCTGGTTATTTGGGTGAGAGTAGA-CTCTTGAATATCAC-CTTAGCT-CC 47185884 Query 2460 ATCACTTGTCATCTGCATTGGCTCCATCGTTGCTACTTGTTGTACTTATAACTCACTCTA 2519 |||| ||||||| ||| |||||| ||||||| || | || || ||||| ||||| Sbjct 47185885 TGCACTCCTCATCTGTATTTCATCCATCATTGCTACCTGCTTCACCTACAACTCTCTCTA 47185944 Query 2520 TTGAT 2524 |||| Sbjct 47185945 CTGAT 47185949 Score = 59.0 bits (64), Expect = 3e-06 Identities = 79/110 (72%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 454 TATATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATGCTGAACAAATCCAAGGC 513 || |||||||||||||| |||||||||||||| || | ||| | ||||||| | | | Sbjct 47180341 TACATCAATTACAAATTAATGAAGAAGAAAGTTAATCGATACACACAACAAATTGAGGTC 47180400 Query 514 GGATCTCAACATCCTCGCCATGTTCTCAAAGATTTCTCGAGGATGCTCGA 563 ||| | ||| | | ||||||| | || ||||| || |||| || Sbjct 47180401 GGAACACAAAACGGTGATAATGTTCTGATGGACTTCTCAAGATTGCTAGA 47180450 Score = 39.2 bits (42), Expect = 2.5 Identities = 55/74 (74%), Gaps = 10/74 (14%) Strand=Plus/Minus Query 2690 TCCATTTGTTGGAAATTCCAGTTTTGTGAGATTCTTTTTCTGAAGTATTGTAATAAATTC 2749 || |||||| ||| || | || |||||||| ||| || ||| | ||||| ||| Sbjct 10353033 TCAATTTGT--GAATTT--ATTTGTGTGAGAT-CTTCTT-----GTAGTTAAATAATTTC 10352984 Query 2750 TCATATAAATTTAT 2763 |||||||||||||| Sbjct 10352983 TCATATAAATTTAT 10352970 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 2744 AAATTCTCATATAAATTTATAAGTTT 2769 ||||||||||||| |||||||| ||| Sbjct 16105952 AAATTCTCATATATATTTATAAATTT 16105927 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 30857969 TAAAAATTTCACATATAAATTTATAATTTTATAT 30858002 Score = 39.2 bits (42), Expect = 2.5 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 2690 TCCATTTGTTGGAAATTCCAGTTTTGTGAGATTCTTTTT 2728 ||| ||||||||| ||||| || | |||||||||||| Sbjct 40102740 TCCGTTTGTTGGAGATTCCGTTTGTTGGAGATTCTTTTT 40102702 Score = 39.2 bits (42), Expect = 2.5 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 1852 CCAGAAGATGAAGAGGAATGCGATGAAA 1879 |||||||||||||| |||| |||||||| Sbjct 40752433 CCAGAAGATGAAGATGAAT-CGATGAAA 40752459 Score = 39.2 bits (42), Expect = 2.5 Identities = 38/48 (79%), Gaps = 1/48 (2%) Strand=Plus/Minus Query 1601 GTTTACTCCAAATCAAATTCAAGTTTTACAAGT-TTACATTTAACCAA 1647 ||||||| ||| ||||||||||| ||| || | | |||| || |||| Sbjct 43628383 GTTTACTTGAAAGCAAATTCAAGTATTATAACTGTAACATATACCCAA 43628336 Score = 37.4 bits (40), Expect = 8.8 Identities = 41/54 (76%), Gaps = 3/54 (6%) Strand=Plus/Minus Query 2723 CTTTTTCTGAAGTATTGTAATAAAT---TCTCATATAAATTTATAAGTTTTTAT 2773 |||||| | || |||| ||||| || ||||||||||| | || | |||| || Sbjct 5066517 CTTTTTATAAATTATTTTAATACATAACTCTCATATAAAATCATTACTTTTCAT 5066464 Score = 37.4 bits (40), Expect = 8.8 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 2735 TATTGTAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 |||| || | |||| | ||||||||||||| ||||||| Sbjct 30078187 TATTTTATTTAATTAT--TATAAATTTATAAATTTTTAT 30078223 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2732 AAGTATTGTAATAAATTCTCATATAAATTT 2761 ||||||||||||| ||| || |||||||| Sbjct 30349173 AAGTATTGTAATATATTTTCCCATAAATTT 30349144 Score = 37.4 bits (40), Expect = 8.8 Identities = 32/39 (82%), Gaps = 3/39 (8%) Strand=Plus/Plus Query 2735 TATTGTAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 |||| || |||||| | ||| |||||||||||||||| Sbjct 35583267 TATTATATTAAATT---AAATATATTTATAAGTTTTTAT 35583302 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2727 TTCTGAAGTATTGTAATAAATTCTCATATA 2756 |||| ||||||| ||| | ||||||||||| Sbjct 41929500 TTCTCAAGTATTTTAAGATATTCTCATATA 41929471 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 46.4 bits (50), Expect = 0.017 Identities = 42/51 (82%), Gaps = 3/51 (6%) Strand=Plus/Plus Query 2724 TTTTTCTGAAGT-ATTGTAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 || ||||||| | ||| || | |||| | ||||||||||||||||||||| Sbjct 13976078 TTCTTCTGAACTTATTTTATTTAATTAT--TATAAATTTATAAGTTTTTAT 13976126 Score = 41.0 bits (44), Expect = 0.73 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 473 TGAAGAAGAAAGTGAAGCAATATGCTGAAC 502 ||||||||||| ||||||||||| ||||| Sbjct 17280759 TGAAGAAGAAATCGAAGCAATATGTTGAAC 17280788 Score = 39.2 bits (42), Expect = 2.5 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 961 GAAAATGAAGGAAGCTTTTAT 981 ||||||||||||||||||||| Sbjct 4308096 GAAAATGAAGGAAGCTTTTAT 4308116 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2751 CATATAAATTTATAAGTTTTTATTT 2775 ||||||||||||||||||| | ||| Sbjct 1484649 CATATAAATTTATAAGTTTATTTTT 1484673 Score = 37.4 bits (40), Expect = 8.8 Identities = 29/34 (85%), Gaps = 2/34 (6%) Strand=Plus/Minus Query 2742 ATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 |||||||| |||||||||||||| ||| | ||| Sbjct 3206102 ATAAATTC--ATATAAATTTATAAATTTGTTTTT 3206071 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 30 ACGATTTGATTGATATTTCCTCAATGAT 57 ||||| ||||||||||||| | |||||| Sbjct 5070148 ACGATATGATTGATATTTCTTAAATGAT 5070175 Score = 37.4 bits (40), Expect = 8.8 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 2736 ATTGTAATAAATTCTCATATAAATTTATAAGTTTT 2770 ||| |||||||||||||| || | || | |||||| Sbjct 6425464 ATTTTAATAAATTCTCATTTATACTTTTCAGTTTT 6425498 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 42.8 bits (46), Expect = 0.21 Identities = 35/42 (83%), Gaps = 3/42 (7%) Strand=Plus/Plus Query 2735 TATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTTG 2776 |||| ||||||||| ||||||||||| |||||| | |||| Sbjct 26912575 TATTATAATAAATT---ATATAAATTTAAAAGTTTATTTTTG 26912613 Score = 41.0 bits (44), Expect = 0.73 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 458 TCAATTACAAATTGATGAAGAAGAAAG 484 ||||||||||| ||| ||||||||||| Sbjct 11527100 TCAATTACAAAGTGAGGAAGAAGAAAG 11527074 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 14537076 TAAAAATTTCACATATAAATTTATAATTTTATAT 14537043 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2748 TCTCATATAAATTTATAAGTTTTTATTT 2775 ||||| |||| ||| ||||||||||||| Sbjct 1491910 TCTCACATAATTTTTTAAGTTTTTATTT 1491883 Score = 37.4 bits (40), Expect = 8.8 Identities = 44/56 (79%), Gaps = 3/56 (5%) Strand=Plus/Minus Query 2711 TTTTGTGAGATTCTTTTTCTGAAGTATTGTAATAAATTCTCATAT-AAATTTATAA 2765 ||||||| ||||| ||||||||||| | || ||| | |||| |||||||||| Sbjct 8507740 TTTTGTGC-ATTCTGTTTCTGAAGTA-TACAAAAAAAGCGAATATGAAATTTATAA 8507687 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2542 AAATTTTACAAAATAGAATAAAACA 2566 |||||||| ||| |||||||||||| Sbjct 12116377 AAATTTTAAAAACTAGAATAAAACA 12116401 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2542 AAATTTTACAAAATAGAATAAAACA 2566 |||||||| ||| |||||||||||| Sbjct 12178974 AAATTTTAAAAACTAGAATAAAACA 12178998 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 1854 AGAAGATGAAGAGGAATGCGATGAAAG 1880 ||||||||||||| ||||| ||||||| Sbjct 21910956 AGAAGATGAAGAGCAATGC-ATGAAAG 21910931 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 41.0 bits (44), Expect = 0.73 Identities = 38/48 (79%), Gaps = 3/48 (6%) Strand=Plus/Minus Query 2728 TCTGAAGTATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||||| ||||| || ||||| | |||||||||||||||| | ||| Sbjct 5106849 TCTGACGTATTATATAAAATT---ACATAAATTTATAAGTTTATTTTT 5106805 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 20982318 TAAAAATTTCACATATAAATTTATAATTTTATAT 20982285 Score = 37.4 bits (40), Expect = 8.8 Identities = 32/38 (84%), Gaps = 4/38 (11%) Strand=Plus/Minus Query 473 TGAAGAAGAAAGTGAAGC--AATATGCTG--AACAAAT 506 ||||||||||| |||||| ||||||| | ||||||| Sbjct 16751160 TGAAGAAGAAATTGAAGCGGAATATGCAGGAAACAAAT 16751123 Score = 37.4 bits (40), Expect = 8.8 Identities = 35/43 (81%), Gaps = 5/43 (12%) Strand=Plus/Minus Query 1847 TCAAGCCAGAAGATGAAGAGGAATGCGATGAAAGTGAAGAATC 1889 ||||| |||||||||| | ||| || |||||||||||||| Sbjct 18807294 TCAAG--AGAAGATGAAAATGAA---GAAGAAAGTGAAGAATC 18807257 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2772 ATTTGGTATCTGCTTTTATATAC 2794 |||||||||||||||||||| || Sbjct 22319900 ATTTGGTATCTGCTTTTATAAAC 22319878 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 41.0 bits (44), Expect = 0.73 Identities = 49/63 (78%), Gaps = 4/63 (6%) Strand=Plus/Minus Query 2711 TTTTGTGAGATTCTTTTTCTGAAGTATTGTAATAAATTCTCATAT--AAATTTATAAGTT 2768 ||||||| |||||||||||||| || ||||| || | |||| |||| || ||||| Sbjct 6818424 TTTTGTGC-ATTCTTTTTCTGAAATA-TGTAAAAAGAGCGAATATGAAAATCTAAAAGTT 6818367 Query 2769 TTT 2771 ||| Sbjct 6818366 TTT 6818364 Score = 39.2 bits (42), Expect = 2.5 Identities = 33/39 (85%), Gaps = 5/39 (13%) Strand=Plus/Minus Query 1182 TCTAGGAAACACATTTTTGTACATGGTCAACACTTATAT 1220 ||||||| ||||||||||||| ||| |||||||||| Sbjct 12139721 TCTAGGATACACATTTTTGTA-ATG----ACACTTATAT 12139688 Score = 39.2 bits (42), Expect = 2.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 653 TAGCCAAATTGAGGGAATCTCATGATGCT 681 ||||||||||||||| |||| ||| |||| Sbjct 17183438 TAGCCAAATTGAGGGTATCTGATGTTGCT 17183410 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 17475568 TAAAAATTTCACATATAAATTTATAATTTTATAT 17475535 Score = 39.2 bits (42), Expect = 2.5 Identities = 32/38 (84%), Gaps = 1/38 (3%) Strand=Plus/Minus Query 1607 TCCAAATCAAATTCAAGTTTT-ACAAGTTTACATTTAA 1643 |||| |||| ||||||||||| |||| ||| | ||||| Sbjct 20462487 TCCATATCATATTCAAGTTTTAACAATTTTGCTTTTAA 20462450 Score = 37.4 bits (40), Expect = 8.8 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 845 ATTATTACGTGAAGACCCGCGCTAATCACCCTTACTCTCA 884 ||| ||||||||||| || ||| ||||| |||| ||||| Sbjct 4295208 ATTCTTACGTGAAGA-CCACGCAAATCATCCTTTTTCTCA 4295170 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 137 TCGTCTTTTGATTCTCCTCTTCTTCACCTTTT 168 || ||||||| | ||||||||||||| ||||| Sbjct 11408089 TCATCTTTTGCT-CTCCTCTTCTTCATCTTTT 11408119 Score = 37.4 bits (40), Expect = 8.8 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Plus Query 2720 ATTCTTTTTCTGAAGTATTG-TAATAAATTCTCATATAAA 2758 ||| ||||| |||||||| ||| ||| ||||||||||| Sbjct 20352784 ATTTTTTTTTATAAGTATTGCTAAAAAACTCTCATATAAA 20352823 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2754 ATAAATTTATAAGTTTTTATTTG 2776 |||||||||||||||||||| || Sbjct 22503121 ATAAATTTATAAGTTTTTATGTG 22503143 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 41.0 bits (44), Expect = 0.73 Identities = 30/34 (88%), Gaps = 1/34 (3%) Strand=Plus/Minus Query 2689 CTCCA-TTTGTTGGAAATTCCAGTTTTGTGAGAT 2721 ||||| ||| |||||||||||||| || |||||| Sbjct 25860316 CTCCAATTTTTTGGAAATTCCAGTCTTATGAGAT 25860283 Score = 37.4 bits (40), Expect = 8.8 Identities = 31/37 (84%), Gaps = 2/37 (5%) Strand=Plus/Minus Query 2594 TTGATTATTTTTGTTGTTCT--AATTCatatgggtgt 2628 |||||||||||||||||| | ||| ||||| |||| Sbjct 10805001 TTGATTATTTTTGTTGTTGTAGAATATATATGAGTGT 10804965 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 567 TCAGATATTGAAAGTGAATCATTGTTTG 594 || ||||||||| |||||||||||| || Sbjct 11138508 TCCGATATTGAAGGTGAATCATTGTATG 11138481 Score = 37.4 bits (40), Expect = 8.8 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1847 TCAAGCCAGAAGATGAAGAGGAATGCGATGAAAGTGAAGA 1886 |||| | |||||||||||| ||| ||||| || ||||| Sbjct 16133178 TCAATCAAGAAGATGAAGAAGAAGATGATGACAGCGAAGA 16133217 Score = 37.4 bits (40), Expect = 8.8 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1856 AAGATGAAGAGGAATGCGATGAA-AGTGAA 1884 ||||||||||| |||||| |||| |||||| Sbjct 20640872 AAGATGAAGAGAAATGCGTTGAAGAGTGAA 20640901 Score = 37.4 bits (40), Expect = 8.8 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2538 TACCAAATTTTACAAAATAG 2557 |||||||||||||||||||| Sbjct 28143380 TACCAAATTTTACAAAATAG 28143361 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 41.0 bits (44), Expect = 0.73 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 2750 TCATATAAATTTATAAGTTTTTATTTG 2776 |||||| ||||||||||||| |||||| Sbjct 4173531 TCATATCAATTTATAAGTTTATATTTG 4173557 Score = 41.0 bits (44), Expect = 0.73 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 2799 TAGTCCATGCACATCCATTTCTGGTTCTCTTGTTG 2833 |||||||||||||| ||| ||| ||| ||||||| Sbjct 27128049 TAGTCCATGCACATACATCTCTCTTTCCCTTGTTG 27128083 Score = 41.0 bits (44), Expect = 0.73 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 2586 TCTTTGATTTGATTATTTTTGTTGTTCTAATT 2617 ||||| |||| |||||||||||| ||||| || Sbjct 32548309 TCTTTTATTTTATTATTTTTGTTCTTCTATTT 32548340 Score = 37.4 bits (40), Expect = 8.8 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 275 AGATTTAATCTGTATAAGAAGATCTCAAGATCAGCTT 311 || |||||| | |||| ||| || ||||||||||||| Sbjct 8479278 AGGTTTAATTTATATA-GAATATTTCAAGATCAGCTT 8479313 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 946 CTTCATGAGCTTCAAGAAAATGAAGGAA 973 ||||| | |||||||||||| ||||||| Sbjct 24854248 CTTCAAGTGCTTCAAGAAAAGGAAGGAA 24854275 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 2801 GTCCATGCACATCCATTTCTGGTTCTCTTGTTG 2833 |||||||||||| ||| ||| ||| ||||||| Sbjct 27853546 GTCCATGCACATACATCTCTCTTTCCCTTGTTG 27853578 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2518 TATTGATTTTGGAGTTTTGCTAC 2540 |||||||||| |||||||||||| Sbjct 30132329 TATTGATTTTCGAGTTTTGCTAC 30132307 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2752 ATATAAATTTATAAGTTTTTATT 2774 || |||||||||||||||||||| Sbjct 32843911 ATCTAAATTTATAAGTTTTTATT 32843933 Score = 37.4 bits (40), Expect = 8.8 Identities = 53/69 (77%), Gaps = 8/69 (12%) Strand=Plus/Minus Query 2726 TTTCTGAAGTATTGTAATAA-ATTCTCATATAAATTTATAAGTTTTTATTTGGTATCTGC 2784 |||| || |||| |||||| ||| | | ||||| ||| ||||||||||| ||| | Sbjct 34503098 TTTCATAATTATT-TAATAATATTATAA-ATAAA---ATATGTTTTTATTTGATATTT-- 34503046 Query 2785 TTTTATATA 2793 ||||||||| Sbjct 34503045 TTTTATATA 34503037 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 41.0 bits (44), Expect = 0.73 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 2802 TCCATGCACATCCATTTCTGGTTCTCTTGTTG 2833 ||||| |||||||||||||| ||| |||||| Sbjct 35294537 TCCATTCACATCCATTTCTGCTTCAATTGTTG 35294568 Score = 41.0 bits (44), Expect = 0.73 Identities = 41/51 (80%), Gaps = 2/51 (4%) Strand=Plus/Plus Query 2885 ATATATCTGTTTATCTGACTTTG-ACATATACATAAATTAGATATTTTAAT 2934 |||||| | | |||||||||||| ||| ||| || ||||| || |||||| Sbjct 40431470 ATATATATATATATCTGACTTTGTACAGATATAT-AATTACTTAATTTAAT 40431519 Score = 39.2 bits (42), Expect = 2.5 Identities = 40/51 (78%), Gaps = 5/51 (10%) Strand=Plus/Plus Query 2878 TATGTTGATATATCTGTTTATCTGACTTTGACATATACATAAATTAGATAT 2928 ||| || |||||||||||||||| |||| ||||| ||||| || ||| Sbjct 7097016 TATATTTATATATCTGTTTATCT--CTTT---ATATATATAAAGAAGCTAT 7097061 Score = 39.2 bits (42), Expect = 2.5 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 143 TTTGATTCTCCTCTTCTTCAC 163 ||||||||||||||||||||| Sbjct 9875689 TTTGATTCTCCTCTTCTTCAC 9875709 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 22333308 TAAAAATTTCACATATAAATTTATAAATTTATAT 22333275 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 2724 TTTTTCTGAAGTATTGTAATAAATTCTCATATA 2756 || |||| ||||||| ||| | ||||||||||| Sbjct 5381919 TTGTTCTCAAGTATTTTAAGATATTCTCATATA 5381951 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 71 AAATGCGATTGATAAATGATCACATTAC 98 |||| || ||||||||||||||||||| Sbjct 10729114 AAATAGGAATGATAAATGATCACATTAC 10729141 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 2752 ATATAAATTTATAAGTTTTTATTTGG 2777 |||||||||||||| |||||||||| Sbjct 533955 ATATAAATTTATAATGTTTTATTTGG 533980 Score = 39.2 bits (42), Expect = 2.5 Identities = 53/69 (77%), Gaps = 4/69 (6%) Strand=Plus/Plus Query 2594 TTGATTATTTTTGTTGTTCTAATTCatatgggtgtatatgtgttttat-aatacatatag 2652 || |||||||||||| |||| ||| | || ||||||| || | ||| |||| ||||| Sbjct 2221113 TTTATTATTTTTGTTTTTCT-ATTTAAATACATGTATAT-TGATGTATAAATATATATA- 2221169 Query 2653 tatgtatat 2661 ||| || || Sbjct 2221170 TATTTAAAT 2221178 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 2750 TCATATAAATTTATAAGTTTTTATTT 2775 |||||| |||||| |||||||||||| Sbjct 9910297 TCATATTAATTTACAAGTTTTTATTT 9910322 Score = 37.4 bits (40), Expect = 8.8 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTT-ATAAGTTTTTATTT 2775 ||||| ||| |||||||||||| ||| | ||||||| Sbjct 3535844 TAATATATTTTCATATAAATTTCATATTTATTTATTT 3535880 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 440 AATGGAGTG-GCTATTATATCAATTACAAATT 470 |||| |||| || |||||||||||||| |||| Sbjct 4521612 AATGAAGTGTGCGATTATATCAATTACCAATT 4521643 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 471 GATGAAGAAGAAAGTGAAGCAATAT 495 |||||||||||||| ||||||||| Sbjct 4641015 GATGAAGAAGAAAGAAAAGCAATAT 4641039 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 458 TCAATTACAAATTGATGAA-GAAGAAA 483 |||||||||||||||| || ||||||| Sbjct 10877959 TCAATTACAAATTGATTAATGAAGAAA 10877933 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 808 AAGAAATTCGACAAAAGGTTTGGATATA 835 |||||||| ||| ||||||||||| ||| Sbjct 18773346 AAGAAATTAGACGAAAGGTTTGGAAATA 18773319 Score = 37.4 bits (40), Expect = 8.8 Identities = 38/47 (81%), Gaps = 6/47 (13%) Strand=Plus/Plus Query 2747 TTCTCATATAAATTTATAAGTTTTTATTTGGTATCTGCTTTTATATA 2793 ||||||||||||||||| || ||| |||||| || |||||| || Sbjct 23919678 TTCTCATATAAATTTAT---TTATTACTTGGTA-CT--TTTTATTTA 23919718 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 466 AAATTGATGAAGAAGAAAGTGAA 488 |||||||||||||||||| |||| Sbjct 26808492 AAATTGATGAAGAAGAAATTGAA 26808470 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 466 AAATTGATGAAGAAGAAAGTGAA 488 |||||||||||||||||| |||| Sbjct 26856828 AAATTGATGAAGAAGAAATTGAA 26856806 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 466 AAATTGATGAAGAAGAAAGTGAA 488 |||||||||||||||||| |||| Sbjct 27172894 AAATTGATGAAGAAGAAATTGAA 27172872 Score = 37.4 bits (40), Expect = 8.8 Identities = 40/51 (78%), Gaps = 4/51 (8%) Strand=Plus/Plus Query 2727 TTCTGAAGTATTGTAATA--AATTCTCATA--TAAATTTATAAGTTTTTAT 2773 |||| || |||| ||||| ||| | ||| ||||||||||| ||||||| Sbjct 28037823 TTCTTAAATATTTTAATATGAATATTAATAATTAAATTTATAATTTTTTAT 28037873 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 39.2 bits (42), Expect = 2.5 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 2856 ATGTTTTCTGAGCCAATTGGGTTA 2879 ||||||| |||||||||||||||| Sbjct 20603895 ATGTTTTTTGAGCCAATTGGGTTA 20603918 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 2583 CTCTCTTTGATTTGATTATTTTTGTTGT 2610 ||||||||| | |||| ||||||||||| Sbjct 2947672 CTCTCTTTGTTGTGATCATTTTTGTTGT 2947699 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/29 (90%), Gaps = 3/29 (10%) Strand=Plus/Minus Query 2746 ATTCTCATAT---AAATTTATAAGTTTTT 2771 |||||||||| |||||||||||||||| Sbjct 6561888 ATTCTCATATTTTAAATTTATAAGTTTTT 6561860 Score = 37.4 bits (40), Expect = 8.8 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Minus Query 2752 ATATAAATTTATAAGTTTTTATTTGGTATCTGCTTTTATA 2791 |||| ||||||||||||| | |||| || | ||||||| Sbjct 16600651 ATATCAATTTATAAGTTTATTTTTGTTAGATCTTTTTATA 16600612 Score = 37.4 bits (40), Expect = 8.8 Identities = 34/42 (81%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 2724 TTTTTCTGAAGTATTGTAATAAATTCTCATATAAATTTATAA 2765 |||||| | ||||| ||||| ||||||||||| || | ||| Sbjct 29848548 TTTTTCAG--GTATTCTAATATATTCTCATATATATATTTAA 29848509 Score = 37.4 bits (40), Expect = 8.8 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 2741 AATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||||| | || || ||| ||| ||||||||||||| Sbjct 30732218 AATAATTACTAATTTAAGTTTTTAAGTTTTTATTT 30732184 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 39.2 bits (42), Expect = 2.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 2750 TCATATAAATTTATAAGTTTTTATTT 2775 |||||| ||||||| ||||||||||| Sbjct 20168000 TCATATTAATTTATGAGTTTTTATTT 20168025 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 2904 TTTGACATATACATAAATTAGATATTTT 2931 ||||||||||||| || |||||||||| Sbjct 7106363 TTTGACATATACAAAAGGTAGATATTTT 7106390 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2743 TAAATTCTCATATAAATTTATAAGTTTT 2770 |||||| | |||||| |||||||||||| Sbjct 10825552 TAAATTTTAATATAAGTTTATAAGTTTT 10825525 Score = 37.4 bits (40), Expect = 8.8 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Minus Query 2735 TATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTTG 2776 ||| || |||| |||||||||| | ||| | |||||||||| Sbjct 13119136 TATAGTTATAA-TTCTCATATAGTTCTATGACTTTTTATTTG 13119096 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 652 TTAGCCAAATTGAGGGAATCTCATGAT 678 ||||||||||||| ||||||| ||||| Sbjct 14867439 TTAGCCAAATTGA-GGAATCTAATGAT 14867414 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 58 TGGGTCCGAGAGTAAATGCGATTGA 82 |||||||||||||||| | |||||| Sbjct 16287116 TGGGTCCGAGAGTAAAAGAGATTGA 16287092 Score = 37.4 bits (40), Expect = 8.8 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 2740 TAATAAATT-CTCATATAAATTTATAAGTTTTTATTT 2775 |||||||| |||||||||||||||| || ||||| Sbjct 26245680 TAATAAATAACTCATATAAATTTATATAATTATATTT 26245644 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 2532 TTTTGCTACCAAATTTTACAAAATAGAATAAAA 2564 ||||| || | |||||| |||||||||||||| Sbjct 27270894 TTTTGATAATATATTTTAAAAAATAGAATAAAA 27270862 Score = 37.4 bits (40), Expect = 8.8 Identities = 53/72 (74%), Gaps = 7/72 (10%) Strand=Plus/Minus Query 2711 TTTTGTGAGATTCTTTTTCTGAAGTATTGT---AATAAATTCTCATATAAATTTATAAGT 2767 |||||||||||| ||||| | || |||| | ||| || | || || |||||||||| Sbjct 35510790 TTTTGTGAGATTATTTTT-TTAACTATTTTGTAAATGAAAT---ATTTATATTTATAAGT 35510735 Query 2768 TTTTATTTGGTA 2779 | |||| ||| Sbjct 35510734 AATCATTTTGTA 35510723 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 39.2 bits (42), Expect = 2.5 Identities = 36/43 (84%), Gaps = 2/43 (5%) Strand=Plus/Minus Query 2727 TTCTG-AAGTATTGTAATAAATTCTCATATAAATTTATAAGTT 2768 ||||| || |||| |||||| | |||| ||||||||||| ||| Sbjct 14847578 TTCTGGAATTATT-TAATAAGTACTCAAATAAATTTATATGTT 14847537 Score = 39.2 bits (42), Expect = 2.5 Identities = 27/30 (90%), Gaps = 3/30 (10%) Strand=Plus/Minus Query 2583 CTCTCTT---TGATTTGATTATTTTTGTTG 2609 ||||||| |||||||||||||||||||| Sbjct 33357518 CTCTCTTAGTTGATTTGATTATTTTTGTTG 33357489 Score = 39.2 bits (42), Expect = 2.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 2746 ATTCTCATATAAATTTATAAGTTTTTATT 2774 ||||||||||||| ||| |||| |||||| Sbjct 36778161 ATTCTCATATAAAATTAAAAGTCTTTATT 36778189 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2751 CATATAAATTTATAAGTTTTTATTT 2775 |||||||| |||||||||||| ||| Sbjct 4348379 CATATAAAATTATAAGTTTTTTTTT 4348355 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2736 ATTGTAATAAATTCTCATATAAA 2758 ||| ||||||||||||||||||| Sbjct 7705996 ATTTTAATAAATTCTCATATAAA 7706018 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2542 AAATTTTACAAAATAGAATAAAACA 2566 |||||||| ||| |||||||||||| Sbjct 10200721 AAATTTTAAAAACTAGAATAAAACA 10200697 Score = 37.4 bits (40), Expect = 8.8 Identities = 45/58 (78%), Gaps = 4/58 (7%) Strand=Plus/Minus Query 2720 ATTCTTTTTCTGAAGTATT--GTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||| |||| || || |||| |||| | || | | |||||||||||| ||||||||| Sbjct 13302516 ATTTTTTTACTTAATTATTAAGTAAATATTTTTTA-ATAAATTTATAA-TTTTTATTT 13302461 Score = 37.4 bits (40), Expect = 8.8 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 2742 ATAAATTCTCATATAAATTTATAAG-TTTTTATTT 2775 |||| || |||||||||||| |||| |||| |||| Sbjct 23667049 ATAATTTATCATATAAATTTCTAAGCTTTTGATTT 23667083 Score = 37.4 bits (40), Expect = 8.8 Identities = 36/46 (78%), Gaps = 3/46 (7%) Strand=Plus/Minus Query 2730 TGAAGTATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||| ||||| || ||||| || || ||||||||||||| | ||| Sbjct 27974213 TGATGTATTATATTAAAT---CACATTAATTTATAAGTTTATTTTT 27974171 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTTATA 2764 ||||||||||| ||||| ||||||| Sbjct 31080915 TAATAAATTCTAATATATATTTATA 31080939 Score = 37.4 bits (40), Expect = 8.8 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 440 AATGGAGTG-GCTATTATATCAATTACAAATT 470 |||| |||| || |||||||||||||| |||| Sbjct 31429040 AATGAAGTGTGCGATTATATCAATTACCAATT 31429071 Score = 37.4 bits (40), Expect = 8.8 Identities = 33/41 (80%), Gaps = 4/41 (10%) Strand=Plus/Plus Query 2735 TATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 |||| | ||||||| ||||||||||||| ||||| ||| Sbjct 35355246 TATTTTTATAAATT----TATAAATTTATAATTTTTTTTTT 35355282 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 39.2 bits (42), Expect = 2.5 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 2740 TAATAAATTCTCATATAAATTTATAAGTTTTTAT 2773 ||| || ||| ||||||||||||||| ||| ||| Sbjct 8815306 TAAAAATTTCACATATAAATTTATAATTTTATAT 8815339 Score = 39.2 bits (42), Expect = 2.5 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 2906 TGACATATACATAAATTAGATATT 2929 |||||||||||||||||| ||||| Sbjct 28267159 TGACATATACATAAATTATATATT 28267136 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1344 CAACAAATCTTACTTCAAACCTCTTGTGTT 1373 |||||||||||| |||| |||| |||| || Sbjct 683274 CAACAAATCTTATTTCATACCTTTTGTATT 683303 Score = 37.4 bits (40), Expect = 8.8 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 2742 ATAAATTCTCATATAAATTTATAAGTTTTTATTTG 2776 ||| ||| | |||||||||||||| ||| | |||| Sbjct 10123901 ATATATTTTAATATAAATTTATAAATTTATTTTTG 10123867 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2542 AAATTTTACAAAATAGAATAAAACA 2566 |||||||| ||| |||||||||||| Sbjct 16230830 AAATTTTAAAAACTAGAATAAAACA 16230806 Score = 37.4 bits (40), Expect = 8.8 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2542 AAATTTTACAAAATAGAATAAAACA 2566 |||||||| ||| |||||||||||| Sbjct 22291779 AAATTTTAAAAACTAGAATAAAACA 22291755 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2748 TCTCATATAAATTTATAAGTTTTTATTT 2775 |||||||| ||||||||||||| | ||| Sbjct 25471061 TCTCATATTAATTTATAAGTTTATTTTT 25471034 Score = 37.4 bits (40), Expect = 8.8 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 2736 ATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTT 2775 ||| |||| ||| |||||||||||||| ||||||||| Sbjct 27598502 ATTTTAATTAATA-TCATATAAATTTATGTTTTTTTATTT 27598464 >Query1 on lcl|JrScfU0007| Query1 on lcl|JrScfU0007 Length=67448 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 466 AAATTGATGAAGAAGAAAGTGAAGCAATAT 495 ||||||||||||||||| ||||| |||| Sbjct 65006 AAATTGATGAAGAAGAAGTTGAAGAGATAT 64977 >Query1 on lcl|JrScfU0006| Query1 on lcl|JrScfU0006 Length=71448 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 466 AAATTGATGAAGAAGAAAGTGAAGCAATAT 495 ||||||||||||||||| ||||| |||| Sbjct 17426 AAATTGATGAAGAAGAAGTTGAAGAGATAT 17455 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 37.4 bits (40), Expect = 8.8 Identities = 36/43 (84%), Gaps = 5/43 (12%) Strand=Plus/Plus Query 2734 GTATTGTAATAAATTCTCATATAAATTTATAAGTTTTTATTTG 2776 ||||| || ||||||| |||||||||||||| |||||||| Sbjct 836552 GTATTATA-TAAATTC--ATATAAATTTATAA--ATTTATTTG 836589 Score = 37.4 bits (40), Expect = 8.8 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2750 TCATATAAATTTATAAGTTT 2769 |||||||||||||||||||| Sbjct 5993351 TCATATAAATTTATAAGTTT 5993370 Score = 37.4 bits (40), Expect = 8.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 2600 ATTTTTGTTGTTCTAATTCatatgggt 2626 |||||||||||||| |||| ||||||| Sbjct 7144575 ATTTTTGTTGTTCT-ATTCTTATGGGT 7144600 Score = 37.4 bits (40), Expect = 8.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 962 AAAATGAAGGAAGCTTTTATTCAATTTATG 991 ||||| | |||||||| |||||||||||| Sbjct 18745988 AAAATAGAAGAAGCTTTAATTCAATTTATG 18745959 Score = 37.4 bits (40), Expect = 8.8 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2753 TATAAATTTATAAGTTTTTATTT 2775 ||||||||||||| ||||||||| Sbjct 24435097 TATAAATTTATAAATTTTTATTT 24435075 Score = 37.4 bits (40), Expect = 8.8 Identities = 35/43 (81%), Gaps = 4/43 (9%) Strand=Plus/Minus Query 2735 TATTGTA-ATAAA---TTCTCATATAAATTTATAAGTTTTTAT 2773 |||| || ||||| ||| ||||||||||||||| ||| ||| Sbjct 27562052 TATTATATATAAAATTTTCACATATAAATTTATAATTTTATAT 27562010 Score = 37.4 bits (40), Expect = 8.8 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 2737 TTGTAATAAATTCTCATATAAATTTATAAGTTTTT 2771 ||||||| || | | | |||||| ||||||||||| Sbjct 28420680 TTGTAATCAACTATAAAATAAATCTATAAGTTTTT 28420714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1551611158886 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2