BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=2194 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr3D 553 4e-155 lcl|Jr1S 44.6 0.044 lcl|Jr8S 42.8 0.15 lcl|Jr7D 42.8 0.15 lcl|Jr4S 42.8 0.15 lcl|Jr8D 41.0 0.54 lcl|Jr7S 41.0 0.54 lcl|Jr6S 41.0 0.54 lcl|Jr6D 41.0 0.54 lcl|Jr5S 41.0 0.54 lcl|Jr5D 41.0 0.54 lcl|Jr4D 41.0 0.54 lcl|Jr3S 41.0 0.54 lcl|Jr2S 41.0 0.54 lcl|Jr2D 41.0 0.54 lcl|Jr1D 41.0 0.54 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 553 bits (612), Expect = 4e-155 Identities = 776/1087 (71%), Gaps = 34/1087 (3%) Strand=Plus/Minus Query 825 TATCAGGTTGGGAGTGATTTAAAAGGATGGAGTGAGATTCATAGCTTTGTTTCTCGAAAT 884 || |||||||| ||||| | ||| |||||| | ||| ||||| | || || ||| Sbjct 11039634 TAACAGGTTGGAAGTGACTCTGGAGGTTGGAGTACAACTCACAGCTTCATGTCACGGAAT 11039575 Query 885 GAGGGTTCAGAAGAAACATTAGCTTTCATGTTTGGTGATATGGGATGTTATACACCTTAT 944 | | || || |||||| |||||||| |||| |||||||||||| |||||| || Sbjct 11039574 GGAGACTCTGATGAAACAGTAGCTTTCCTGTTCGGTGATATGGGAACGGCTACACCATAC 11039515 Query 945 ACAACATTTATCCGTGGAGAAGAAGAAAGTTTATCAACTGTGAAATGGATTTTAAGAGAC 1004 |||||||| ||||| |||| ||||| || |||| |||||||||| | | || Sbjct 11039514 TCAACATTTCTCCGTACGCAAGAGGAAAGCATAGCAACCATGAAATGGATCCTCCGTGAT 11039455 Query 1005 ATTGAAGCTTTAGGTGATGATAAGCCTGTGATTGTATCACATATCGGAGATATAAGTTAT 1064 ||| | ||| | || || ||||||| |||| |||||||| || || || || ||| Sbjct 11039454 ATTAATGCTCTGGGGGAC---AAGCCTGCATTTGTGTCACATATTGGTGACATCAGCTAT 11039398 Query 1065 GCACGAGGTTACTCGTGGATTTGGGATGAGTTCTTTACTCAGATTGAGCCTATTGCTTCT 1124 ||| |||| || | ||| | ||||| |||| || || |||||||| ||| |||| || Sbjct 11039397 GCAAGAGGATATGCATGGTTGTGGGACCAGTTTTTCACGCAGATTGAACCTGTTGCATCC 11039338 Query 1125 AAAGTGCCTTACCATGTATGTATTGGTAACCATGAGTATGATTGGCCTAACCAGCCTTGG 1184 ||||| | |||||||| || |||||||| |||||||| | ||||| ||||||||| Sbjct 11039337 AAAGTAGCATACCATGTGTGCATTGGTAATCATGAGTACAACTGGCCGTCACAGCCTTGG 11039278 Query 1185 AAACCAGATTGGGCTGCTTATGTTTATGGTAAAGATAGTGGTGGTGAATGTGGTGTACCG 1244 | ||| | ||| ||| ||||||| | |||| | ||||||||||| || |||| Sbjct 11039277 AGACCTCAGTGGTCTGAGAGGATTTATGGAACAGATGGGGGTGGTGAATGCGGCATACCC 11039218 Query 1245 TATAGTGTTAAGTTCAACATGCCTGGTAATTCAACGGAAGCTACTGGTA----TGGTTAA 1300 ||||| ||||||||||||||||||| || || | ||| | ||||| | | | | Sbjct 11039217 TATAGCCTTAAGTTCAACATGCCTGGGAACTCTTCAGAACCAACTGGAACCCGAGCTCCA 11039158 Query 1301 GGGACCTCAAAGTCGGAACCTTTACTATTCTTATGATATGGGTTCTGTTCATTTCGTTTA 1360 | || ||| ||||||||||||| || | | ||||||| | || |||||||| || Sbjct 11039157 G---CCACAA----GGAACCTTTACTACTCATTTAATATGGGGGCAGTACATTTCGTGTA 11039105 Query 1361 TATTTCGACAGAGACTGATTTTCTTAAAGGTGGGAAGCAGTATAGTTTTTTGAAGAGTGA 1420 || || || ||||| |||| ||| || | || || |||| ||| | ||| ||| Sbjct 11039104 CATGTCAACCGAGACCAATTTCCTTCCGGGAAGCAACCAATATAACTTTATAAAGCATGA 11039045 Query 1421 TTTGGAGTCTGTTAATAGGAGTAAGACACCGTTTGTTGTTGTCCAAGGGCATAGACCTAT 1480 |||||||| || || | | ||||| || ||||| || ||||||||||| |||| || Sbjct 11039044 CTTGGAGTCACTTGATCGAAAAAAGACCCCTTTTGTGGTAGTCCAAGGGCACCGACCCAT 11038985 Query 1481 GTACACTACGAG-TAGGAAGATCAGAGACGCTGCTATAAGAGAGAAGATGATCGAGCATT 1539 |||||| || || | |||| || || || | | || || | |||| | ||||| | Sbjct 11038984 GTACACAACAAGCAATGAAG-GGAGGGATGCCCCATTGAGGGAAAGGATGCTTGAGCACT 11038926 Query 1540 TGGAACCGTTGTTAGTGAAGAACAATGTGACGGTTGCTTTATGGGGACATGTACATAGAT 1599 ||||||| ||||| ||||| ||||| ||||| |||| || ||||| ||||| ||||||| Sbjct 11038925 TGGAACCCTTGTTCGTGAAAAACAAGGTGACCCTTGCATTGTGGGGTCATGTCCATAGAT 11038866 Query 1600 ATGAAAGGTTTTGTGCGATTAGTAACAATACTTGTGG-----------TGAACG------ 1642 |||| ||||||||| | | | |||| ||||||||| |||| | Sbjct 11038865 ATGAGAGGTTTTGTCCAGTGAATAACTTTACTTGTGGAAGCATGGGCCTGAATGGGAAGA 11038806 Query 1643 -TTGGCAAGGAAATCCAGTTCATCTTGTGATTGGTATGGCTGGAAAAGACTCACAACCGA 1701 ||| ||| | ||| || ||| |||||||||| ||||| || | |||| ||||| | Sbjct 11038805 ACTGGGAAGCATTTCCTGTCCATGTTGTGATTGGGATGGCAGGGCAGGACTGGCAACCCA 11038746 Query 1702 TGTGGGAACCGAGAGCTAATCACGAGGATGTCCCGATCTTTCCTCAGCCTGCTAACTCAA 1761 | |||||||| ||| |||| ||| ||| ||| || || || || || |||| Sbjct 11038745 TATGGGAACCTAGATCTAACCACCCAAATGACCCAATATTCCCACAACCAAAGCACTCTC 11038686 Query 1762 TGTACCGTGGAGGCGAGTTTGGGTACATTCGTTTGGTTGCTAATAAGGAAAGACTTACTC 1821 ||||||| || || ||||||||||| | | | |||||||||| |||||| | || || | Sbjct 11038685 TGTACCGCGGGGGTGAGTTTGGGTATACTAGATTGGTTGCTACTAAGGAGAAGCTGACGC 11038626 Query 1822 TTTCTTATGTGGGAAACCATGACGGAGAAGTTCATGATGTTGTTGAGATTTTGGCTTCTG 1881 |||||||||| || |||||||| || || || |||||| || |||||| | || |||| Sbjct 11038625 TTTCTTATGTAGGGAACCATGATGGGGAGGTGCATGATACAGTCGAGATTCTAGCATCTG 11038566 Query 1882 GGGAAGT 1888 | ||||| Sbjct 11038565 GAGAAGT 11038559 Score = 122 bits (134), Expect = 2e-25 Identities = 196/278 (71%), Gaps = 8/278 (3%) Strand=Plus/Minus Query 238 GATCCGGCGAC---ATAGTCGTGATCAAATGGTCCGGCGTCGAATCACCGTCCGATCTCG 294 ||||||||||| ||| || ||| |||||||||| ||| || || || | |||| Sbjct 11041003 GATCCGGCGACTCGATACTC---ATCCAATGGTCCGGTATCGCCTCCCCCTCGAAGCTCG 11040947 Query 295 ACTGGTTAGGAATCTACTCGCCACCGGACTCTCCTCACGATCACTT-CATCGGCTACAAA 353 ||||| | || || |||||||| ||| |||| | |||| ||||| ||||||||| | Sbjct 11040946 ACTGGCTCGGGATTTACTCGCCCCCGAACTCGTCCAACGA-CACTTTCATCGGCTATACC 11040888 Query 354 TTCCTCTCCGATTCACCCACGTGGCAATCCGGGTCGGGTTCGATTTCACTTCCCTTAACC 413 ||||| || || || | |||| || |||||||| || || || || ||| | | Sbjct 11040887 TTCCTGTCGTCCTCCCCGAATTGGCGTTCTGGGTCGGGCTCCATCTCCCTCCCCCTGGTC 11040828 Query 414 AATCTCCGATCAAATTACACTTTCCGGATCTTTCATTGGACCCAATCCGAAATAAACCCG 473 || || ||||| || ||| | ||||||||||| ||| | |||||| | ||||| Sbjct 11040827 AACCTTCGATCCAACTACTCCTTCCGGATCTTCAGCTGGCTTGAGTCCGAAGTCGACCCG 11040768 Query 474 AAACACCAAGACCATGATCACAATCCTTTACCCGGAAC 511 | | || || || || |||||||| || ||||| || Sbjct 11040767 CACCGCCTCGATCACGACCACAATCCCTTGCCCGGTAC 11040730 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 |||||||||||||||||||| ||| || || ||| || Sbjct 17673535 TCTTCTTCTTCTTCCTCTTATTCTTCTACTTTTTTTT 17673499 Score = 41.0 bits (44), Expect = 0.54 Identities = 33/40 (83%), Gaps = 0/40 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 ||||||||||||||||| |||| ||| |||| || ||| Sbjct 27088540 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTC 27088501 Score = 39.2 bits (42), Expect = 1.9 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCT-TAATCTCCTC 190 ||||||| |||||||||||| |||||| ||| Sbjct 2635792 TCTCTTCATCTTCTTCCTCTATAATCTGCTC 2635822 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 164 CTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||| ||| |||||||| Sbjct 12422841 CTTCTTCTTCTTCTTCTAAATCTCCT 12422866 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||||||||||||||| ||| || | ||| || Sbjct 16420188 TCTTCTTCTTCTTCCTCTTCTTCTTCTTTTTTTTTT 16420153 Score = 39.2 bits (42), Expect = 1.9 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 1198 CTGCTTATGTTTATGGTAAAGATAGTGGTGGTGAATGTGGTGTA 1241 ||| || ||||| |||| ||||||||||||| |||||||| Sbjct 17953681 CTGTTTTTGTTTCTGGTGGCGATAGTGGTGGTGGTGGTGGTGTA 17953638 Score = 39.2 bits (42), Expect = 1.9 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 337 ACTTCATCGGCTACAAATTCCTCT 360 || ||||||||||||||||||||| Sbjct 26394385 ACCTCATCGGCTACAAATTCCTCT 26394408 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||| |||| ||| |||| ||| Sbjct 1985827 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTT 1985859 Score = 37.4 bits (40), Expect = 6.6 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCA 201 |||||||||||||| ||| ||| || || ||||| ||||| Sbjct 10598039 CTCTCTTCTTCTTCCTCC-CTTTCCCTTCTTTGTTTCTTCCA 10598079 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTC-CTCT 191 |||||||||||||||| |||| |||| |||| Sbjct 21826503 TCTCTTCTTCTTCTTCTTCTTCTTCTCTCTCT 21826534 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 23537765 ATATGGGTTCTTTTCATTACTTTTATCTTT 23537794 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 27883893 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 27883866 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 1254 AAGTTCAACATGCCT-GGTAATTCAACGGAAGCTACT 1289 ||||||| |||||| || ||||| ||||||||||| Sbjct 34425721 AAGTTCACCATGCCCAGGAAATTCGTCGGAAGCTACT 34425757 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCT 186 ||||||||||||||||||| | ||||| Sbjct 35198951 CTCTCTTCTTCTTCTTCCT-TCAATCT 35198976 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTAT 197 |||||||||||||| |||| ||| |||| || || Sbjct 36733929 TCTTCTTCTTCTTCTTCTTGATCCTCTCTCTTCAT 36733963 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 164 CTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||||||||||||| |||| |||||||| Sbjct 36968877 CTTCTTCTTCTTCTTCTTCTTCTCCTCT 36968904 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 44.6 bits (48), Expect = 0.044 Identities = 27/29 (93%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||||||| ||||||||| || Sbjct 20537809 TCTCTTCTTCTTCTTCTTCTTAATCTTCT 20537781 Score = 41.0 bits (44), Expect = 0.54 Identities = 33/40 (83%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 ||||||||||||||||| |||| ||| || | ||| ||| Sbjct 9646063 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTC 9646102 Score = 39.2 bits (42), Expect = 1.9 Identities = 34/41 (83%), Gaps = 1/41 (2%) Strand=Plus/Plus Query 150 GCCGTTTACACTCT-CTTCTTCTTCTTCCTCTTAATCTCCT 189 ||| ||| |||||| ||||||||||||| |||| ||| || Sbjct 616668 GCCCTTTTCACTCTGCTTCTTCTTCTTCTTCTTCTTCTTCT 616708 Score = 39.2 bits (42), Expect = 1.9 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||| ||||| ||| |||| ||| Sbjct 23342579 TCTTCTTCTTCTTCTTCTTATTCT-CTCTCTTT 23342548 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 360611 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 360584 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||| |||||||| ||| || Sbjct 4315391 CTCTCTTCTTCTTTTTCCTCTTCCTCTTCT 4315362 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||| |||||||| ||| || Sbjct 4323978 CTCTCTTCTTCTTTTTCCTCTTCCTCTTCT 4323949 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 9644531 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 9644560 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||||| |||| ||| ||| Sbjct 10459702 TCTCTTCTTCTTCTTCTTCTTCTTCTTCTC 10459673 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 |||||||||||||| |||| || |||||| Sbjct 20458971 TCTTCTTCTTCTTCTTCTTCTTCACCTCTG 20458942 Score = 37.4 bits (40), Expect = 6.6 Identities = 35/44 (80%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCAAAGCC 206 |||||||||||||| |||| ||| |||| |||| || |||| Sbjct 23015043 TCTTCTTCTTCTTCTTCTTCTTCT--TCTGCGTATTACATAGCC 23015084 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAAT 184 ||||||||||||||||| |||| || Sbjct 28353680 CTCTCTTCTTCTTCTTCTTCTTTAT 28353704 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 42.8 bits (46), Expect = 0.15 Identities = 29/32 (91%), Gaps = 2/32 (6%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAAT--CTCCTCTG 192 |||||||||||||| ||||||| |||||||| Sbjct 15498567 TCTTCTTCTTCTTCTTCTTAATTACTCCTCTG 15498598 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 |||||||||||||| |||| ||| |||| ||| || Sbjct 10097260 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTTTT 10097225 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 154 TTTACACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||| | ||||||||||||||||| |||| ||| || Sbjct 10097293 TTTTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 10097258 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1985 TGTGGGAGTGATTTTTGGGTACT 2007 |||| |||||||||||||||||| Sbjct 3883594 TGTGAGAGTGATTTTTGGGTACT 3883616 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 ||||||||||||||||||| | || |||| Sbjct 9121591 TCTTCTTCTTCTTCCTCTTGACCTGATCTG 9121620 Score = 37.4 bits (40), Expect = 6.6 Identities = 37/47 (79%), Gaps = 1/47 (2%) Strand=Plus/Plus Query 154 TTTACACTCTCTTCTTCTTCTTCCTCTTAAT-CTCCTCTGTTTATTC 199 ||| || ||||| |||||||||||||| | |||| || ||| ||| Sbjct 10467880 TTTGCAACCTCTTTTTCTTCTTCCTCTTGTTGCTCCACTCTTTTTTC 10467926 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 42.8 bits (46), Expect = 0.15 Identities = 26/28 (93%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 ||||||||||||||||||| ||||||| Sbjct 167432 TCTTCTTCTTCTTCCTCTTCTTCTCCTC 167459 Score = 41.0 bits (44), Expect = 0.54 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 164 CTTCTTCTTCTTCCTCTTAATCTCCTC 190 ||||||||||||| ||||| ||||||| Sbjct 12182625 CTTCTTCTTCTTCTTCTTATTCTCCTC 12182599 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 || ||||||||||| || |||| | |||||||||| Sbjct 4850129 CTTTCTTCTTCTTCCTCTTCTTGGTTTCCTCTGTTT 4850164 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 || ||||||||||||| |||| |||||||| Sbjct 12476037 TCACTTCTTCTTCTTCTTCTTCTTCTCCTCT 12476067 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGT 193 || |||||||||||||||| ||||| || || ||| Sbjct 13443076 CATTCTCTTCTTCTTCTTCATCTTAGGCTGCTTTGT 13443041 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 159 ACTCTCTTCTTCTTCTTCCTCTTAAT 184 |||||||||||||| ||| ||||||| Sbjct 20510131 ACTCTCTTCTTCTTTTTCTTCTTAAT 20510106 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 162 CTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||| |||| |||| || Sbjct 1531157 CTCTTCTTCTTCTTCTTCTTCATCTACT 1531184 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||||||||||| ||| || Sbjct 5771075 CTCTTCTTCTTCTTCCTCTTCTTCTTCT 5771048 Score = 37.4 bits (40), Expect = 6.6 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCAA 202 |||||||||||||| |||| ||| || | ||| |||||| Sbjct 9950047 TCTTCTTCTTCTTCTTCTTCTTCTTCT-TCTTTTTTCCAA 9950085 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 21318531 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 21318502 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 42.8 bits (46), Expect = 0.15 Identities = 36/42 (86%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 325 CTCCTCACG-ATCACTTCATCGGCTACAAATT-CCTCTCCGA 364 |||||||| ||||||||||| ||||| |||| |||||| || Sbjct 27529534 CTCCTCACCTATCACTTCATCTGCTACTAATTCCCTCTCTGA 27529493 Score = 39.2 bits (42), Expect = 1.9 Identities = 34/40 (85%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGT-TTATTCC 200 |||||||||||||| |||| || ||| |||| ||||||| Sbjct 6591729 TCTTCTTCTTCTTCTTCTTCTTCTTCCCCTGTCTTATTCC 6591768 Score = 39.2 bits (42), Expect = 1.9 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATC-TCCTCT 191 ||||||||||||||||| |||| || |||||| Sbjct 8234811 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCT 8234843 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||||||| |||| |||||| Sbjct 9750817 TCTCTTCTTCTTCTTCTTCTTCTTCTCCT 9750789 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||||||||||||||||| || ||||||| Sbjct 5586714 TCTTCTTCTTCTTCCTC--AAACTCCTCT 5586688 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCT 186 || || |||||||||||||| |||| |||| Sbjct 6804420 ACTCTTTCTTCTTCTTCTTCTTCTTCATCT 6804449 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 7212315 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 7212344 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 11682205 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 11682232 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 11825253 ATATGGGTTCTTTTCATTCCTTTTATCTTT 11825282 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTC 179 |||||||||||||||||||| Sbjct 14219651 CTCTCTTCTTCTTCTTCCTC 14219632 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 21120472 ATATGGGTTCTTTTCATTCCTTTTATCTTT 21120443 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 |||||||||||||| |||| ||| ||||| Sbjct 27823416 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTG 27823387 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/36 (89%), Gaps = 2/36 (6%) Strand=Plus/Plus Query 2085 GAGGAGACATGATTCAACTGAtttg-tttttgtttg 2119 || ||||||||||||| | |||||| |||||||||| Sbjct 3289848 GACGAGACATGATTCATC-GATTTGTTTTTTGTTTG 3289882 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/36 (89%), Gaps = 2/36 (6%) Strand=Plus/Plus Query 2085 GAGGAGACATGATTCAACTGAtttg-tttttgtttg 2119 || ||||||||||||| | |||||| |||||||||| Sbjct 3325339 GACGAGACATGATTCATC-GATTTGTTTTTTGTTTG 3325373 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/36 (89%), Gaps = 2/36 (6%) Strand=Plus/Plus Query 2085 GAGGAGACATGATTCAACTGAtttg-tttttgtttg 2119 || ||||||||||||| | |||||| |||||||||| Sbjct 3345419 GACGAGACATGATTCATC-GATTTGTTTTTTGTTTG 3345453 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/36 (89%), Gaps = 2/36 (6%) Strand=Plus/Plus Query 2085 GAGGAGACATGATTCAACTGAtttg-tttttgtttg 2119 || ||||||||||||| | |||||| |||||||||| Sbjct 3386341 GACGAGACATGATTCATC-GATTTGTTTTTTGTTTG 3386375 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/36 (89%), Gaps = 2/36 (6%) Strand=Plus/Plus Query 2085 GAGGAGACATGATTCAACTGAtttg-tttttgtttg 2119 || ||||||||||||| | |||||| |||||||||| Sbjct 3391830 GACGAGACATGATTCATC-GATTTGTTTTTTGTTTG 3391864 Score = 41.0 bits (44), Expect = 0.54 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 || |||||||||||||| |||| |||||||| Sbjct 12528756 CTTTCTTCTTCTTCTTCTTCTTCTTCTCCTCT 12528787 Score = 41.0 bits (44), Expect = 0.54 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||||||||||| ||| || Sbjct 18501140 TCTTCTTCTTCTTCCTCTTATTCTTCT 18501166 Score = 41.0 bits (44), Expect = 0.54 Identities = 30/34 (88%), Gaps = 1/34 (3%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATC-TCCTCTG 192 ||| ||||||||||||| |||| ||| ||||||| Sbjct 30679706 CTCCCTTCTTCTTCTTCTTCTTCATCGTCCTCTG 30679673 Score = 39.2 bits (42), Expect = 1.9 Identities = 36/43 (84%), Gaps = 2/43 (5%) Strand=Plus/Minus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAATCTCC-TCTGTTTATTC 199 |||| |||||||||||||| |||| ||||| ||| || |||| Sbjct 6284474 CACT-TCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTTTGATTC 6284433 Score = 39.2 bits (42), Expect = 1.9 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATC-TCCTCTGT 193 ||||||||||||||| |||| || |||||||| Sbjct 10660010 CTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGT 10659978 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||||||||||||||| ||| || | ||| || Sbjct 18616241 TCTTCTTCTTCTTCCTCTTCTTCTTCTTTTTTTTTT 18616206 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 159 ACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 || |||||| ||||||||||| |||||||| Sbjct 20690071 ACCCTCTTCGTCTTCTTCCTCAAAATCTCCT 20690041 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 |||||||||||||||| || || |||| ||| Sbjct 28945939 TCTCTTCTTCTTCTTCTTCCTATTCTCTTCT 28945969 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 |||||||||||||| |||| || || ||| |||||| Sbjct 2150249 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTATT 2150285 Score = 37.4 bits (40), Expect = 6.6 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 2079 AAAAACGAGGAGACATGATTCAACTGAtttgtttttgtttgt 2120 |||| || ||||||||||||| | |||||| |||| | ||| Sbjct 3238877 AAAATTGATGAGACATGATTCATC-GATTTGATTTTTTATGT 3238917 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 9898614 TCTTCTTCTTCTTCCTCTTA 9898595 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC-TGTTTATT 198 |||||||||||||| |||| ||| ||| ||||| || Sbjct 14791260 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTTTTTT 14791224 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 23579336 TCTTCTTCTTCTTCCTCTTA 23579355 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 23580132 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 23580103 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||||| |||| ||| Sbjct 24485180 ATATGGGTTCTTTTCATTTCTGTTATCTTT 24485209 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 41.0 bits (44), Expect = 0.54 Identities = 31/37 (84%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 |||||||||||||| |||| |||||| | ||| ||| Sbjct 13221236 TCTTCTTCTTCTTCTTCTTCTTCTCCTTTTTTTTTTC 13221200 Score = 39.2 bits (42), Expect = 1.9 Identities = 35/43 (81%), Gaps = 2/43 (5%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGT--TTATTCC 200 || |||||||||||||| |||| |||| | ||| ||||||| Sbjct 5492622 CTTTCTTCTTCTTCTTCTTCTTTATCTTTTATGTTGTTATTCC 5492580 Score = 39.2 bits (42), Expect = 1.9 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCA 201 |||||||||||||| |||| ||| ||| | || ||||| Sbjct 15356529 TCTTCTTCTTCTTCTTCTTCTTCTTCTCAGATTTTTCCA 15356567 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 10268607 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 10268578 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 165 TTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||| ||||||||| || Sbjct 10894088 TTCTTCTTCTTCTTCTTAATCTTCT 10894112 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTC 187 |||||||||||||| |||| ||||| Sbjct 11567787 TCTTCTTCTTCTTCATCTTCATCTC 11567811 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 12886688 TCTTCTTCTTCTTCCTCTTA 12886669 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 ||||||||||||||||||| || || ||| ||| || Sbjct 13717895 TCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTTTTTTT 13717859 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 |||||||||||||| |||| |||||| | |||| || Sbjct 18155569 TCTTCTTCTTCTTCTTCTTCTTCTCCT-TCTTTACTC 18155604 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||||||||||||||||| || ||||||| Sbjct 18968011 TCTTCTTCTTCTTCCTC--AAACTCCTCT 18967985 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTC-CTCT 191 |||||||||||||||| |||| |||| |||| Sbjct 20861618 TCTCTTCTTCTTCTTCTTCTTCTTCTCTCTCT 20861587 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 ||||||||||||||||||| ||| ||| ||| || || Sbjct 14742703 TCTTCTTCTTCTTCCTCTTCATCTTCCCCTGCTTCTT 14742739 Score = 41.0 bits (44), Expect = 0.54 Identities = 31/37 (84%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 ||||||||||||||||||| |||| ||| || ||| Sbjct 24237562 TCTTCTTCTTCTTCCTCTTCTTCTCTTCTTCTTCTTC 24237526 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 |||||||||||||| ||||| |||| | | ||| || Sbjct 15792407 TCTTCTTCTTCTTCTTCTTATTCTCTTTTTTTTTTT 15792442 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||| ||||||||||| |||| |||||||| Sbjct 8779072 CTCCTCTTCTTCTTCTTCTTCTTCTCCTCT 8779043 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 11616309 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 11616282 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 13210734 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 13210707 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 14322993 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 14322964 Score = 37.4 bits (40), Expect = 6.6 Identities = 34/42 (81%), Gaps = 2/42 (5%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCAA 202 |||||||||||||||| |||| ||| ||| || |||||| Sbjct 19974514 TCTCTTCTTCTTCTTCTTCTTCTTCT--TCTTCTTTTTCCAA 19974553 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 41.0 bits (44), Expect = 0.54 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 152 CGTTTACACTCTCTTCTTCTTCTTCCTCTT 181 |||||||| | |||||||||||||| |||| Sbjct 37482491 CGTTTACATTTTCTTCTTCTTCTTCTTCTT 37482520 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 154 TTTACACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||| |||||||||||||| |||| ||| || Sbjct 177398 TTTACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 177363 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 |||||||||||||| |||| |||||| | ||| || Sbjct 2134626 TCTTCTTCTTCTTCTTCTTCTTCTCCTTTTTTTTTT 2134661 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 2134611 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 2134640 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 7774115 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 7774144 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 19460138 ATATGGGTTCTTTTCATTCCTTTTATCTTT 19460109 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC-TGTTTATT 198 |||||||||||||| |||| ||| ||| ||||| || Sbjct 24650853 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTTTTTT 24650889 Score = 37.4 bits (40), Expect = 6.6 Identities = 33/39 (85%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCA 201 |||||||||||||| |||| ||| || ||||| ||||| Sbjct 26698211 TCTTCTTCTTCTTCTTCTTCTTCTTCT-TGTTT-TTCCA 26698247 Score = 37.4 bits (40), Expect = 6.6 Identities = 35/42 (83%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAAT-CTCCTCTGTTTATT 198 |||| || ||||||||||| ||||||| | || |||||| || Sbjct 32001614 CACT-TCCTCTTCTTCTTCTTCTTAATCCCCCCCTGTTTTTT 32001574 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 41.0 bits (44), Expect = 0.54 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAAT 184 ||||||||||||||||| ||||||| Sbjct 17711842 CTCTCTTCTTCTTCTTCTTCTTAAT 17711818 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 167 CTTCTTCTTCCTCTTAATCTCCTCT 191 || |||||||||||| ||||||||| Sbjct 7053806 CTCCTTCTTCCTCTTCATCTCCTCT 7053830 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATC 185 |||||||||||||||| |||| ||| Sbjct 7830363 TCTCTTCTTCTTCTTCTTCTTCATC 7830339 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 949 CATTTATCCGTGGAGAAGAA 968 |||||||||||||||||||| Sbjct 12143078 CATTTATCCGTGGAGAAGAA 12143059 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 27854609 ATATGGGTTCTTTTCATTCCTTTTATCTTT 27854580 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 29214573 ATATGGGTTCTTTTCATTCCTTTTATCTTT 29214602 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 |||||||||||||||||||| ||| || || ||| || Sbjct 21298369 TCTTCTTCTTCTTCCTCTTATTCTTCTACTTTTTTTT 21298405 Score = 41.0 bits (44), Expect = 0.54 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 158 CACTCTCTTCTTCTTCTTCCTC 179 |||||||||||||||||||||| Sbjct 33527111 CACTCTCTTCTTCTTCTTCCTC 33527090 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||||||||||||||| ||||| ||| || Sbjct 1511972 TCTCTTCTTCTTCTTCTTCTTATTCTTCT 1512000 Score = 39.2 bits (42), Expect = 1.9 Identities = 31/36 (86%), Gaps = 1/36 (3%) Strand=Plus/Minus Query 155 TTACACTC-TCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||| |||||||||||||| ||||| ||| || Sbjct 10234152 TTACACTTATCTTCTTCTTCTTCTTCTTATTCTTCT 10234117 Score = 39.2 bits (42), Expect = 1.9 Identities = 32/38 (84%), Gaps = 1/38 (3%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 |||||||||||||||| |||| ||| || | |||||| Sbjct 17537272 TCTCTTCTTCTTCTTCTTCTTCTTCTTCT-TTTTTATT 17537308 Score = 39.2 bits (42), Expect = 1.9 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 524 AACCGAATCAAACCAGTTAAA 544 ||||||||||||||||||||| Sbjct 19169175 AACCGAATCAAACCAGTTAAA 19169195 Score = 39.2 bits (42), Expect = 1.9 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCT 186 |||||||||||||||||||| ||| Sbjct 21216427 TCTTCTTCTTCTTCCTCTTATTCT 21216450 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATC 185 ||||||||||||||||||| ||| Sbjct 167675 TCTTCTTCTTCTTCCTCTTCATC 167653 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||||||||||||||| |||| ||| |||| Sbjct 1048124 CTCTTCTTCTTCTTCTTCTTCTTCTTCTCT 1048095 Score = 37.4 bits (40), Expect = 6.6 Identities = 52/68 (76%), Gaps = 5/68 (7%) Strand=Plus/Minus Query 155 TTACACTCTCTTCTTCTTCTTCCTCTTAATC-TCCTC-TGTTTAT--TCCAAAGCCACGA 210 || |||| |||||||||||||| |||| || || || |||| || |||||||| | || Sbjct 3822069 TTCCACT-TCTTCTTCTTCTTCTTCTTCTTCTTCATCATGTTCATTATCCAAAGCTAGGA 3822011 Query 211 TTTCAATC 218 ||| || Sbjct 3822010 ACTCACTC 3822003 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 5039759 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 5039732 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 6303877 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 6303906 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||||| |||| ||| || | ||| Sbjct 6310141 TCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTT 6310107 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 162 CTCTTCTTCTTCTTCCTCTTAATC-TCCTCTG 192 ||| || |||||||||||||| || ||||||| Sbjct 6773626 CTCATCCTCTTCTTCCTCTTATTCTTCCTCTG 6773657 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 15780043 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 15780016 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTC 187 |||||||||||||||||| ||| || Sbjct 27194874 TCTTCTTCTTCTTCCTCTCAATTTC 27194850 Score = 37.4 bits (40), Expect = 6.6 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 |||||||||||||| |||| ||||||||| Sbjct 27621490 TCTTCTTCTTCTTCTTCTT-CTCTCCTCTG 27621462 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 |||||||||||||| |||| || |||| | |||||| Sbjct 28365942 TCTTCTTCTTCTTCTTCTTCTTCTTCCTGTCTTTATT 28365978 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 41.0 bits (44), Expect = 0.54 Identities = 36/44 (82%), Gaps = 1/44 (2%) Strand=Plus/Minus Query 155 TTACACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||| | |||||||||||| |||| ||| |||| ||| || Sbjct 8385853 TTACACT-TATTCTTCTTCTTCTTCTTCTTCTTCTCTTTTTTTT 8385811 Score = 41.0 bits (44), Expect = 0.54 Identities = 34/42 (81%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTC 199 |||||||||||| ||| ||| || |||| ||||||| ||| Sbjct 9241032 CACTCTCTTCTTTTTCCTCCCTTTCCTCTCTTCTGTTTCTTC 9241073 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 10 TTTGGTTTCAAACAATGACTTCATAATCACT 40 |||||||| | ||||||| ||||||||||| Sbjct 6345793 TTTGGTTTACATCAATGACATCATAATCACT 6345763 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 |||||||||||||| |||| |||||||| Sbjct 14351630 TCTTCTTCTTCTTCTTCTTCTTCTCCTCT 14351602 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||||||||||||||| ||| || | ||| || Sbjct 17247090 TCTTCTTCTTCTTCCTCTTCTTCTTCTTTTTTTTTT 17247055 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 || |||||||||||||| |||| || | ||||||| Sbjct 24133390 CTTTCTTCTTCTTCTTCTTCTTCATTTGTTCTGTTT 24133355 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 6981915 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 6981942 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 452 GACCCAATCCGAAATAAACCCGAAA 476 ||| |||||||||||||||| |||| Sbjct 8831672 GACACAATCCGAAATAAACCTGAAA 8831648 Score = 37.4 bits (40), Expect = 6.6 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 || ||||||||||||||||||| |||||| Sbjct 14301097 CTTTCTTCTTCTTCTTCCTCTT-CTCTCCT 14301069 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 16285086 ATATGGGTTCTTTTCATTCCTTTTATCTTT 16285057 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 17447480 ATATGGGTTCTTTTCATTCCTTTTATCTTT 17447451 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||| |||| ||| || ||||| Sbjct 20049278 TCTTCTTCTTCTTCTTCTTCTTCTTCTTTGTTT 20049246 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||| |||||||||||||||| |||| ||| || Sbjct 20049287 ACAATCTCTTCTTCTTCTTCTTCTTCTTCTTCT 20049255 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 || || |||||||||||||| |||| ||| |||| Sbjct 20066404 ACTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCT 20066438 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 21409033 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 21409004 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||| ||| | | |||||| ||| Sbjct 22591256 TCTTCTTCTTCTTCTTCTCAGTTTCCTCTATTT 22591224 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 || ||||||||||||||||| |||| ||| || Sbjct 27490611 ACTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 27490643 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 164 CTTCTTCTTCTTCCTCTTAATCT 186 ||||||||||||| ||||||||| Sbjct 30118446 CTTCTTCTTCTTCTTCTTAATCT 30118468 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 |||||||||||||||||||| ||| || || ||| || Sbjct 12424868 TCTTCTTCTTCTTCCTCTTATTCTTCTACTTTTTTTT 12424832 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCC 188 |||||||||||||| |||| |||||| Sbjct 3403548 TCTTCTTCTTCTTCTTCTTCATCTCC 3403573 Score = 39.2 bits (42), Expect = 1.9 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 149 CGCCGTTTACACTCTCTTCTTCTTCTTCCTCTTAATCTC 187 |||| ||| |||| ||||||||||||| |||| |||| Sbjct 23144124 CGCCAATTATACTCGCTTCTTCTTCTTCTTCTTCTTCTC 23144162 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 |||||||||||||| |||| ||| || | |||||| Sbjct 23314494 TCTTCTTCTTCTTCTTCTTCTTCTTCTATTTTTATT 23314529 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTT 194 || |||||||||||||| |||| ||| |||| || Sbjct 1684370 CTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTT 1684336 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 ||||||||||||||||||| || || ||| ||| || Sbjct 4685455 TCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTTTTTTT 4685491 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 8062218 ATATGGGTTCTTTTCATTCCTTTTATTTTT 8062247 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCC 200 |||||||||||||| |||| ||| || | ||| |||| Sbjct 9822602 TCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTCC 9822565 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 ||||||||||||||||||| ||| || || ||| || Sbjct 12624404 TCTTCTTCTTCTTCCTCTTCTTCTTCTACTTTTTTTT 12624440 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 |||||||||||||| |||| ||| ||||| Sbjct 13428936 TCTTCTTCTTCTTCTTCTTTTTCTTCTCTG 13428965 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 198 TCCAAAGCCACGATTTCAATCTCTCCC 224 || ||||||||||||||||| |||||| Sbjct 16932284 TCAAAAGCCACGATTTCAAT-TCTCCC 16932259 Score = 37.4 bits (40), Expect = 6.6 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 157 ACACTCTCTTCTTCTTCTTCCTCTT 181 ||||| ||||||||||||||||||| Sbjct 18273443 ACACT-TCTTCTTCTTCTTCCTCTT 18273420 Score = 37.4 bits (40), Expect = 6.6 Identities = 34/42 (81%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCAA 202 |||||||||||||||| |||| ||| ||| ||| ||| || Sbjct 25689827 TCTCTTCTTCTTCTTCTTCTTCTTCT--TCTTTTTCTTCAAA 25689788 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 41.0 bits (44), Expect = 0.54 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 |||||||||||||||||||| ||| || || ||| || Sbjct 13500511 TCTTCTTCTTCTTCCTCTTATTCTTCTACTTTTTTTT 13500547 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGT 193 |||||||||||||| |||| | |||||||| Sbjct 1957907 TCTTCTTCTTCTTCTTCTTCTTTTCCTCTGT 1957937 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 |||||||||||||| |||| |||||||| Sbjct 4152928 TCTTCTTCTTCTTCTTCTTCTTCTCCTCT 4152956 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 |||||||||||||| |||| |||||||| Sbjct 10948152 TCTTCTTCTTCTTCTTCTTCTTCTCCTCT 10948124 Score = 39.2 bits (42), Expect = 1.9 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAATCT 186 ||| ||||||||||||||| ||| ||||| Sbjct 13448515 CACCCTCTTCTTCTTCTTCTTCTAAATCT 13448543 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||||||||||||||| ||| || | ||| || Sbjct 20689843 TCTTCTTCTTCTTCCTCTTCTTCTTCTTTTTTTTTT 20689808 Score = 37.4 bits (40), Expect = 6.6 Identities = 38/46 (83%), Gaps = 3/46 (7%) Strand=Plus/Plus Query 154 TTTACACTCTCTT-CTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||| ||| ||| |||||||||| |||| |||||| | |||||| Sbjct 233353 TTTAC-CTCCCTTTCTTCTTCTTCTTCTTCTTCTCCT-TCTTTATT 233396 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 465 ATAAACCCGAAACACCAAGACCATGATCAC 494 ||||||||||||||||| ||||| | ||| Sbjct 396083 ATAAACCCGAAACACCACCACCATCACCAC 396054 Score = 37.4 bits (40), Expect = 6.6 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||| |||||||||||||| |||| ||| || | ||| || Sbjct 777367 ACACT-TCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTT 777407 Score = 37.4 bits (40), Expect = 6.6 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAAT-CTCCTCT 191 |||||||||||||| |||| || ||||||| Sbjct 5958400 TCTTCTTCTTCTTCTTCTTCATCCTCCTCT 5958371 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||||| |||| ||| || | ||| Sbjct 10878445 TCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTT 10878479 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 18893103 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 18893132 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 ||||||||||||||||||| ||| || || ||| || Sbjct 20771943 TCTTCTTCTTCTTCCTCTTCTTCTTCTACTTTTTTTT 20771907 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 165 TTCTTCTTCTTCCTCTTAATCTCCTCTGTTTAT 197 |||||||||||| ||||||| | ||| ||||| Sbjct 30357753 TTCTTCTTCTTCTTCTTAATTTTTTCTTTTTAT 30357785 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 30977472 ATATGGGTTCTTTTCATTCCTTTTATCTTT 30977501 Score = 37.4 bits (40), Expect = 6.6 Identities = 29/34 (85%), Gaps = 2/34 (6%) Strand=Plus/Plus Query 158 CACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 |||||||| |||||||||||||| ||||||| Sbjct 31655318 CACTCTCTCTTTCTTCTTCCTCTT--CCTCCTCT 31655349 Score = 37.4 bits (40), Expect = 6.6 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTC 187 ||||||||||||||||||| ||||| Sbjct 32493963 TCTTCTTCTTCTTCCTCTT-ATCTC 32493940 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTG 192 |||||||||||||| |||| ||| ||||| Sbjct 35151454 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTG 35151425 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 41.0 bits (44), Expect = 0.54 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 161 TCTCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||||| |||| |||| ||| Sbjct 14657568 TCTCTTCTTCTTCTTCTTCTTCATCTTCTC 14657597 Score = 41.0 bits (44), Expect = 0.54 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 155 TTACACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 |||| ||||||||||||||||||| || ||| || Sbjct 41119091 TTACTCTCTCTTCTTCTTCTTCCTTTTCTTCTTCT 41119057 Score = 39.2 bits (42), Expect = 1.9 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCC 188 |||||||||||||| |||| |||||| Sbjct 29643042 TCTTCTTCTTCTTCTTCTTCATCTCC 29643067 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 629 CGGAGATGGAGAAGAACGAGAAGCT 653 ||||||||||||||| ||||| ||| Sbjct 2045473 CGGAGATGGAGAAGAGCGAGAGGCT 2045449 Score = 37.4 bits (40), Expect = 6.6 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 159 ACTCTCTTCTTCTTCTTCCTCTT 181 |||||||||||||||||| |||| Sbjct 2386328 ACTCTCTTCTTCTTCTTCTTCTT 2386306 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 7555479 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 7555450 Score = 37.4 bits (40), Expect = 6.6 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTT 195 |||||||||||||| |||| ||| || ||||| Sbjct 9311975 TCTTCTTCTTCTTCTTCTTCTTCTTCTTTGTTT 9311943 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 9792096 TCTTCTTCTTCTTCCTCTTA 9792115 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 9792910 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 9792881 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2144 ATTTGTATATCAAATTATTAGAAGT 2168 ||||||| || |||||||||||||| Sbjct 9910685 ATTTGTAAATGAAATTATTAGAAGT 9910709 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 13855869 TCTTCTTCTTCTTCCTCTTA 13855850 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTC 187 ||||||||||||||||||| |||| Sbjct 13953434 TCTTCTTCTTCTTCCTCTTTTTCTC 13953410 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 15944269 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 15944298 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 21881064 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 21881037 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 ||||||||||||||||||| ||| || || ||| || Sbjct 24593850 TCTTCTTCTTCTTCCTCTTCTTCTTCTACTTTTTTTT 24593814 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 154 TTTACACTCTCTTCTTCTTCTTCCTCTTAATCTCCTCT 191 ||| | || |||||||||||||| |||| | |||||| Sbjct 32538536 TTTCCTCTTTCTTCTTCTTCTTCTTCTTTTTTTCCTCT 32538499 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 160 CTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||||| |||| ||| || Sbjct 36530575 CTCTCTTCTTCTTCTTCTTCTTCTTCTTCT 36530546 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 155 TTACACTCTCTTCTTCTTCTTC-CTCT 180 || ||||||||||||||||||| |||| Sbjct 39603430 TTGCACTCTCTTCTTCTTCTTCTCTCT 39603404 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 157 ACACTCTCTTCTTCTTCTTCCTCTT 181 ||| |||||||||||||||| |||| Sbjct 40879984 ACATTCTCTTCTTCTTCTTCTTCTT 40880008 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 |||||||||||||| |||| || || ||| |||||| Sbjct 43410332 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTATT 43410296 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 41.0 bits (44), Expect = 0.54 Identities = 34/42 (81%), Gaps = 0/42 (0%) Strand=Plus/Minus Query 1198 CTGCTTATGTTTATGGTAAAGATAGTGGTGGTGAATGTGGTG 1239 ||| ||||||||||||| | ||||||||||| |||||| Sbjct 38528692 CTGTTTATGTTTATGGTGGTGGTAGTGGTGGTGGTGGTGGTG 38528651 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 159 ACTCTCTTCTTCTTCTTCCTCTTAATCTCCT 189 || |||||| ||||||||||| |||||||| Sbjct 20297003 ACCCTCTTCGTCTTCTTCCTCAAAATCTCCT 20297033 Score = 39.2 bits (42), Expect = 1.9 Identities = 32/38 (84%), Gaps = 1/38 (3%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATC-TCCTCTGTTTATT 198 ||||||||||||||| |||| || || ||| |||||| Sbjct 37761397 CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTATT 37761360 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 1352 TTTCGTTTATATTTCGACAGAGACTGATTTTCTTAA 1387 ||||||||| |||| | |||||||||||||| || Sbjct 40384600 TTTCGTTTAGCTTTCAAATGAGACTGATTTTCTGAA 40384635 Score = 39.2 bits (42), Expect = 1.9 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATT 198 ||||||||||| ||||||| ||| |||| ||| || Sbjct 42169563 TCTTCTTCTTCCTCCTCTTCTTCTTCTCTTTTTTTT 42169528 Score = 39.2 bits (42), Expect = 1.9 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTCTGT 193 |||||||||||||| |||| ||| |||||| Sbjct 44328745 TCTTCTTCTTCTTCTTCTTCTTCTTCTCTGT 44328775 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 8048309 TCTTCTTCTTCTTCCTCTTA 8048328 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 1112 GCCTATTGCTTCTAAAGTGCC-TTACCATGTATGTAT 1147 ||||||||||||||||| ||| ||| | ||| | ||| Sbjct 12761283 GCCTATTGCTTCTAAAGGGCCATTATCTTGTCTATAT 12761319 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| ||| | ||||||| Sbjct 20294147 TCTTCTTCTTCTTCTTCTCATTCTCCTC 20294174 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 23021705 ATATGGGTTCTTTTCATTCCTTTTATCTTT 23021676 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 23900063 ATATGGGTTCTTTTCATTCCTTTTATCTTT 23900034 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1336 ATATGGGTTCTGTTCATTTCGTTTATATTT 1365 ||||||||||| |||||| | ||||| ||| Sbjct 24283812 ATATGGGTTCTTTTCATTCCTTTTATCTTT 24283783 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCT-CTGTTTATT 198 ||||||||||||||||||| ||| || || ||| || Sbjct 27134618 TCTTCTTCTTCTTCCTCTTCTTCTTCTACTTTTTTTT 27134582 Score = 37.4 bits (40), Expect = 6.6 Identities = 30/34 (88%), Gaps = 3/34 (9%) Strand=Plus/Minus Query 157 ACACTCTCTTCTTCTTCTTCCTCTTAATCTCCTC 190 ||||| |||||||||||||| |||| ||||||| Sbjct 30748700 ACACT-TCTTCTTCTTCTTCTTCTT--TCTCCTC 30748670 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 32107742 TCTTCTTCTTCTTCCTCTTA 32107723 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 162 CTCTTCTTCTTCTTCCTCTTAATCTCCT 189 ||||||||||||||| ||||| ||| || Sbjct 35109567 CTCTTCTTCTTCTTCTTCTTATTCTTCT 35109540 Score = 37.4 bits (40), Expect = 6.6 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTAAT-CTCCTCTGTTTATT 198 |||||||||||||| |||| | ||||||| ||| || Sbjct 35135130 TCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTTTTCTT 35135094 Score = 37.4 bits (40), Expect = 6.6 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 164 CTTCTTCTTCTTCCTCTTAATCTCC 188 ||||||||||||| |||| |||||| Sbjct 36280383 CTTCTTCTTCTTCTTCTTCATCTCC 36280407 Score = 37.4 bits (40), Expect = 6.6 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 163 TCTTCTTCTTCTTCCTCTTAATCTCCTC 190 |||||||||||||| |||| ||||||| Sbjct 39925530 TCTTCTTCTTCTTCTTCTTCTTCTCCTC 39925557 Score = 37.4 bits (40), Expect = 6.6 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 163 TCTTCTTCTTCTTCCTCTTA 182 |||||||||||||||||||| Sbjct 46011196 TCTTCTTCTTCTTCCTCTTA 46011177 Score = 37.4 bits (40), Expect = 6.6 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Minus Query 164 CTTCTTCTTCTTCCTCTTAATCTCCTCTGTTTATTCCAAA 203 ||||||||||||| |||| ||| || | ||| ||| ||| Sbjct 48285727 CTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTCAAAA 48285688 Score = 37.4 bits (40), Expect = 6.6 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 153 GTTTACACTCTCTTCTTCTTCTTCCTCTTA 182 |||| | ||||||||||||||||| | ||| Sbjct 51185119 GTTTCCTCTCTCTTCTTCTTCTTCTTATTA 51185090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1155955660066 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2