BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=1704 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr5D 241 2e-61 lcl|JrScfU0001 57.2 5e-06 lcl|Jr2S 57.2 5e-06 lcl|Jr6D 50.0 8e-04 lcl|Jr3S 48.2 0.003 lcl|Jr3D 48.2 0.003 lcl|Jr7D 46.4 0.010 lcl|Jr2D 46.4 0.010 lcl|JrScfU0010 44.6 0.034 lcl|Jr7S 44.6 0.034 lcl|Jr1D 44.6 0.034 lcl|Jr4S 42.8 0.12 lcl|Jr1S 42.8 0.12 lcl|Jr6S 41.0 0.42 lcl|Jr5S 41.0 0.42 lcl|Jr4D 41.0 0.42 lcl|Jr8S 39.2 1.5 lcl|Jr8D 37.4 5.1 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 241 bits (266), Expect = 2e-61 Identities = 316/436 (72%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 733 AGCCACTTGCGAGCCAAAGACCTTGGATGGTCACTCATGGCAACCACGAGCTCGAAAAAA 792 ||||||| || ||||| || ||||||||||| || || |||||||| ||| | || || | Sbjct 1132967 AGCCACTGGCTAGCCAGAGGCCTTGGATGGTGACGCAAGGCAACCATGAGATTGAGAAGA 1133026 Query 793 TACCTATCTTACACAGTAACCCATTCACCGCCTATAA--CAAGAGGTGGCGCATGCCATT 850 | || || | |||| | || ||||| ||||| || ||||| |||||||||||||| Sbjct 1133027 TCCCACTCATCCACAACGAACCCTTCACAGCCTACAATGCAAGA--TGGCGCATGCCATT 1133084 Query 851 TGAAGAGAGTGGCTCGAGCTCGAATTTGTACTATTCTTTCAACGTTTATGGAGTCCACAT 910 ||| ||||||||||| | || ||| | | |||||||||||| || |||||| || | Sbjct 1133085 CGAACAGAGTGGCTCGGGATCAAATCTCTTCTATTCTTTCAATGTCGCTGGAGTGCATGT 1133144 Query 911 TATAATGTTGGGGTCATACACAGATTTTGAGCCTGGCTCGGAGCAGTACCAATGGTTAGA 970 || |||||||| || || ||||||||||| ||| |||| |||| | | |||||||| Sbjct 1133145 CATCATGTTGGGTTCGTATACAGATTTTGATCCTAAATCGGCACAGTTCAAGTGGTTAGA 1133204 Query 971 AAATAATCTCAAGAAAATCGACCGTAAGACCACACCGTGGGTTGTGGCTGTGGTGCATGC 1030 | | ||| || || | || | || |||||| || | | | ||||| Sbjct 1133205 GGCAGACTTGCGGAAGATTGATAGGAACAAAACTCCGTGGACAGTAGTGCTTATTCATGC 1133264 Query 1031 GCCTTGGTACAACTCCAACGAAGCTCACCAAGGAGAGAAAGAGAGTGTGGAGATGAAAGA 1090 ||| |||||||| || || |||||| || || ||||||||| | || ||||| | Sbjct 1133265 GCCCTGGTACAATTCTAATACAGCTCATCAGGGTGAGAAAGAGTCGATTGACATGAAGGC 1133324 Query 1091 ATCCATGGAAACTCTTCTTTACAAAGCTCGTGTCGATTTGGTTTTTGCAGGTCACGTTCA 1150 |||||||||| | |||||| ||||||||| ||| | |||||||| || || || || Sbjct 1133325 ATCCATGGAAGGGTTACTTTACCGAGCTCGTGTGGATGTTGTTTTTGCCGGACATGTACA 1133384 Query 1151 TGCTTACGAGCGTTTT 1166 ||| || ||||| ||| Sbjct 1133385 TGCCTATGAGCGCTTT 1133400 Score = 233 bits (258), Expect = 3e-59 Identities = 402/579 (69%), Gaps = 6/579 (1%) Strand=Plus/Plus Query 591 GGTGACCTTGGTACAT-CTGAATGGAGTAAATCAACATTGGAACATGTATCAAAATGGGA 649 ||||| ||||| ||| |||| |||| | ||||| | |||| || |||||| | | Sbjct 1142151 GGTGATCTTGG-ACAGACTGAGTGGACCGACTCAACCCTCCAACACATAGCAAAATCGAA 1142209 Query 650 TTATGATGTTTTCATCTTGCCTGGTGATCTGTCATACGCTAACATGTACCAACCACTGTG 709 ||| || | | | |||| || || || | || ||| | | ||||| || | || Sbjct 1142210 TTACGACATGCTGCTACTGCCAGGAGACTTGGCTTATGCTGATTTCTACCAGCCTTTTTG 1142269 Query 710 GGACACTTTTGGTCGCTTGGTGCAGCCACTTGCGAGCCAAAGACCTTGGATGGTCACTCA 769 ||| | || || | | ||| ||||||| || ||||| | ||||||||||| || || Sbjct 1142270 GGATTCATTCGGCAGGCTTGTGGAGCCACTGGCAAGCCAGCGGCCTTGGATGGTAACCCA 1142329 Query 770 TGGCAACCACGAGCTCGAAAAAATACCTATCTTACACAGTAACCCATTCACCGCCTATAA 829 |||||||||||| | || || || || || | ||| || || ||||| ||||| || Sbjct 1142330 AGGCAACCACGAGGTTGAGAAGATTCCGGTCATCCACTCCAAACCCTTCACAGCCTACAA 1142389 Query 830 --CAAGAGGTGGCGCATGCCATTTGAAGAGAGTGGCTCGAGCTCGAATTTGTACTATTCT 887 ||||| |||||||||||||||||| ||||||| ||| ||| || | ||||||||| Sbjct 1142390 TGCAAGA--TGGCGCATGCCATTTGAACAGAGTGGATCGGACTCCAACCTATACTATTCT 1142447 Query 888 TTCAACGTTTATGGAGTCCACATTATAATGTTGGGGTCATACACAGATTTTGAGCCTGGC 947 || || || ||| || || ||||| |||||| | || ||||| |||||||| ||| | Sbjct 1142448 TTTAATGTAGCTGGGGTTCATATTATCATGTTGAGTTCGTACACGGATTTTGATCCTAGT 1142507 Query 948 TCGGAGCAGTACCAATGGTTAGAAAATAATCTCAAGAAAATCGACCGTAAGACCACACCG 1007 || | ||||| | |||||||| || | | | || || || || | || || Sbjct 1142508 TCACAACAGTATAAGTGGTTAGAGGCAGATATGGGGCAGATTGATCGGAAAATAACTCCA 1142567 Query 1008 TGGGTTGTGGCTGTGGTGCATGCGCCTTGGTACAACTCCAACGAAGCTCACCAAGGAGAG 1067 ||| | || | | || |||||||| |||||||| | || ||||| || || ||| Sbjct 1142568 TGGATAGTAGTGCTTGTTCATGCGCCATGGTACAATACGAATACTGCTCATCAGGGTGAG 1142627 Query 1068 AAAGAGAGTGTGGAGATGAAAGAATCCATGGAAACTCTTCTTTACAAAGCTCGTGTCGAT 1127 |||||| | |||||||| | || |||||| || ||||| ||||||| || ||| Sbjct 1142628 AAAGAGTCGGATGAGATGAAGGCTTCAATGGAAGGGCTACTTTATCAAGCTCGCGTGGAT 1142687 Query 1128 TTGGTTTTTGCAGGTCACGTTCATGCTTACGAGCGTTTT 1166 | ||||| | || || || || || || ||||| ||| Sbjct 1142688 GTTGTTTTCACTGGACATGTGCACGCATATGAGCGCTTT 1142726 Score = 185 bits (204), Expect = 2e-44 Identities = 387/566 (68%), Gaps = 22/566 (4%) Strand=Plus/Minus Query 609 GAATGGAGTAAATCAACATTGGAACATGTATCAAAATGG-GATTATGATGTTTTCATCTT 667 ||||||| | |||||| | | |||||| | | | || || || || || || | || Sbjct 1123965 GAATGGACTGCATCAACCCTAGCACATGT-TGATAGTGAAGACTACGACGTGTTTTTGTT 1123907 Query 668 GCCTGGTGATCTGTCATACGCTAACATGTACCAACCACTGTGGGACACTTTTGGTCGCTT 727 ||||||||| | |||||||| || | ||||| ||||||||| |||| || ||| | Sbjct 1123906 ACCTGGTGATTTATCATACGCCAATGGCCAGCAACCTCTGTGGGACTCTTTCGGCCGCCT 1123847 Query 728 GGTGCAGCCACTTGCGAGCCAAAGACCTTGGATGGTCACTCATGGCAACCACGAGCTCGA 787 ||| |||| ||||||| | || |||||||| || | || |||||||| |||| Sbjct 1123846 AGTGGAGCCCTACGCGAGCCGCCGCCCATGGATGGTGACCGAAGGGAACCACGACATCGA 1123787 Query 788 AAAAATACCTATCTTACACAGTAACCCA---TTCACCGCCTATAACAAGAGGTGGCGCAT 844 | || || | || || | || | ||||| ||||| || | ||||||| || Sbjct 1123786 GATCATGA-TACCCGAC-CA-TCCCCAAGGCTTCACGGCCTACAATAGCAGGTGGCTGAT 1123730 Query 845 GCCATTTGAAGAGAGTGGCTCGAGCTCGAATTTGTACTATTCTTTCAACGTTTATGGAGT 904 ||||| ||||||||||| || | ||||| || || || ||||| | ||| ||| Sbjct 1123729 GCCATACGAAGAGAGTGGATCCAAATCGAACTTATATTACTCTTTTGATGTTGCTGGGAC 1123670 Query 905 CCACATTATAATGTTGGGGTCATACACAGATTTTGAGCCTGGCTCGGAGCAGTACCAATG 964 ||||| ||||||||||| || ||||| | ||| | | ||| |||||| |||| Sbjct 1123669 TCACATAATAATGTTGGGTTCTTACACGAAGTTTTATGTGGAGTCGCCTCAGTACAAATG 1123610 Query 965 GTTAGAAAATAAT----CTCAAGAAAATCGACCGTAAGACCACACCGTGGGTTGTGGCTG 1020 | | || | || |||||| ||| | | |||||| || |||||| | | | Sbjct 1123609 GCTGGAGTCTGATTTGGCTCAAGTCAATAGGAAG-AAGACC---CCCTGGGTTCTTGTTC 1123554 Query 1021 TGGTGCATGCGCCTTGGTACAACTCCAACGAAGCTCACCAAGGAGAGAAAGAGAGTGTGG 1080 || |||||||||||||||| || | || |||||| |||| | ||| |||| Sbjct 1123553 TGTTGCATGCGCCTTGGTATAATACTAATACAGCTCATCAAG--GCGAAGGAGA----AA 1123500 Query 1081 AGATGAAAGAATCCATGGAAACTCTTCTTTACAAAGCTCGTGTCGATTTGGTTTTTGCAG 1140 |||| | || | ||||| | || | || || || || ||||||||||||||||| | Sbjct 1123499 TCATGAGACAAACAATGGAGAAGCTGTTGTATAAGGCACGGGTCGATTTGGTTTTTGCTG 1123440 Query 1141 GTCACGTTCATGCTTACGAGCGTTTT 1166 | || |||||||| || || |||||| Sbjct 1123439 GACATGTTCATGCATATGAACGTTTT 1123414 Score = 141 bits (156), Expect = 2e-31 Identities = 346/521 (66%), Gaps = 10/521 (2%) Strand=Plus/Minus Query 647 GGATTATGATGTTTTCATCTTGCCTGGTGATCTGTCATACGCTAACATGTACCAACCACT 706 ||| || ||||| || | || || || ||| | |||||||| | | || || || Sbjct 1112136 GGACTACGATGTGTTTTTGTTACCCGGAGATTTATCATACGCCGATGGCCAACAGCCCCT 1112077 Query 707 GTGGGACACTTTTGGTCGCTTGGTGCAGCCACTTGCGAGCCAAAGACCTTGGATGGTCAC 766 |||||| | || || ||| | || ||||| |||| || | || |||||||| || Sbjct 1112076 TTGGGACTCGTTCGGACGCCTAGTTGAGCCATACGCGACCCGCCGCCCATGGATGGTGAC 1112017 Query 767 TCATGGCAACCACGAGCTCGAAAAAATACCTATCTTACACAGTAACCCATTCACCGCCTA 826 | |||||||||||| | || | || || ||| | ||| || |||| |||| Sbjct 1112016 CGAAGGCAACCACGAGATTGAGACCATCCCAATCATCCACCCCTACGGCTTCAGATCCTA 1111957 Query 827 TAACAAGAGGTGGCGCATGCCATTTGAAGAGAGTGGCTCGAGCTCGAATTTGTACTATTC 886 || |||||||| ||||| || || ||||| |||| ||| || ||||| || || Sbjct 1111956 CAATGCCAGGTGGCGAATGCCGCACGAGGAAAGTGGATCGACCTCAAACTTGTATTACTC 1111897 Query 887 TTTCAACGTTTATGGAGTCCACATTATAATGTTGGGGTCATACACAGATTTTGAGCCTGG 946 || ||||| ||| |||||||||||||| || || || || || ||||| ||| Sbjct 1111896 ATTTGACGTTGCTGGGACTCACATTATAATGTTAGGATCTTATACTGAGTTTGATGCTGA 1111837 Query 947 CTCGGAGCAGTACCAATGGTTAGAAAATAATCTCAAGAAAATCGACCGTAAGACCACACC 1006 |||| |||||| | ||| | || || | || | ||| | |||| || || Sbjct 1111836 CTCGTCTCAGTACAAGTGGCTTGAGGCCGATTTGGCCAACGTTGACAGGAAGAAAACGCC 1111777 Query 1007 GTGGGT-TGTG-GCTGTGGTGCATGCGCCTTGGTACAACTCCAACGAAGCTCACCAAGGA 1064 ||| | | || ||| | ||||||| || ||||| ||| | || ||| || ||||| Sbjct 1111776 ATGGATCTTTGTGCTCT--TGCATGCCCCCTGGTATAACACTAATACAGCACATCAAGGT 1111719 Query 1065 GAGAAAGAGAGTGTGGAGATGAAAGAATCCATGGAAACTCTTCTTTACAAAGCTCGTGTC 1124 || ||| || |||| | || | |||||| | || || || || || ||| Sbjct 1111718 GAAGGAGAAAG------CATGAGAAAAGCTATGGAAGAGTTGCTGTATAAGGCACGGGTC 1111665 Query 1125 GATTTGGTTTTTGCAGGTCACGTTCATGCTTACGAGCGTTT 1165 || ||||||||||||| || |||||||| || || || || Sbjct 1111664 GACGTGGTTTTTGCAGGCCATGTTCATGCATATGAACGATT 1111624 Score = 131 bits (144), Expect = 3e-28 Identities = 208/296 (70%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 291 CAGGTGCATATATCTCTGGTTGGGCCGGACAAAATGAGAATATCATGGATAACGCAAAGC 350 |||||||| |||||| ||||||| |||||||||||| || |||||||| || ||||| Sbjct 1141639 CAGGTGCACATATCTTTGGTTGGCGAGGACAAAATGAGGATTTCATGGATTACCGAAAGC 1141698 Query 351 TCAATCTCGCCTAGTGTTGTATATGGCACAGTCTCTGGAAAATACGAAGGCTCGGCTAAT 410 |||| | || | | || | |||||| ||| | | |||||||| || || ||| Sbjct 1141699 TCAACCCCGGCAACAGTAGAATATGGTACATCCCCAACGAAATACGAGTCTTCTGCAAAT 1141758 Query 411 GGAACGTCGTCATCGTACCACTACTTGTTGATTTACCGATCGGGCCAAATTAATGACGTT 470 || || | || ||||||| |||| | | | ||| || || |||| ||||||| Sbjct 1141759 GGGACTACATCCTCGTACCGTTACTCGATAGTGTACAAGTCCGGGGAAATACATGACGTA 1141818 Query 471 GTTATAGGCCCATTAAAGCCCAACACAGTTTACTATTACAAATGTGGAGGCCCAAGTTCA 530 || || || || || ||||| || ||| ||| |||||| | || | || ||| |||| Sbjct 1141819 GTAATTGGTCCCTTGAAGCCGAATACA--TTA-TATTACTATCGTTGCGGTCCAGCTTCA 1141875 Query 531 ACTCAAGAGTTCAGTTTCAGGACTCCTCCCTCTAAATTCCCAATCAAATTCGCCGT 586 | || |||| ||||| || || || || ||||||| |||||||| || || Sbjct 1141876 GGCCGTGACTTCACTTTCAAAACCCCACCAGCTCAATTCCCTATCAAATTTGCAGT 1141931 Score = 96.9 bits (106), Expect = 6e-18 Identities = 203/297 (68%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 291 CAGGTGCATATATCTCTGGTTGGGCCGGACAAAATGAGAATATCATGGATAACGCAAAGC 350 |||||||||||||| | |||||| ||||||||||| || |||||||| || ||| | Sbjct 1132409 CAGGTGCATATATCCGTAGTTGGGGAAGACAAAATGAGGATTTCATGGATTACTGAAACC 1132468 Query 351 TCAATCTCGCCTAGTGTTGTATATGGCACAGTCT-CTGGAAAATACGAAGGCTCGGCTAA 409 |||| | | | ||| ||||| || ||| |||| || ||||| || || | Sbjct 1132469 TCAACCCAAGCAACAGTTCAGTATGGTAC-CTCTCCTGGGAAGTACGAGTTTTCTGCAGA 1132527 Query 410 TGGAACGTCGTCATCGTACCACTACTTGTTGATTTACCGATCGGGCCAAATTAATGACGT 469 |||||| | || ||||| || | | |||| || || || | ||| ||||| Sbjct 1132528 TGGAACTACATCTTCGTA-CAGT--TATTTGACGTATGATTCTGGGGAGATTCATGACAC 1132584 Query 470 TGTTATAGGCCCATTAAAGCCCAACACAGTTTACTATTACAAATGTGGAGGCCCAAGTTC 529 || || || ||||| |||||||| | || |||||| | || | ||| | ||| Sbjct 1132585 CGTAATTGGTCCATTGAAGCCCAATTCTGT---ATATTACTACCGTTGTGGCATAGATTC 1132641 Query 530 AACTCAAGAGTTCAGTTTCAGGACTCCTCCCTCTAAATTCCCAATCAAATTCGCCGT 586 || | ||||||||||||| || || || || | |||||| |||||||||| || Sbjct 1132642 CACCCGCGAGTTCAGTTTCAAAACCCCACCAGCTCAGTTCCCAGTCAAATTCGCTGT 1132698 Score = 84.2 bits (92), Expect = 4e-14 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1247 TGCTACCAAGTATAGAGATCCAAATCCCGAAATATCATTGTTTAGAGAAGCAAGTTTCGG 1306 |||| || |||| |||||||| || || ||||| | || || || || || || || Sbjct 1143116 TGCTTACAGGTATGAAGATCCAACGCCTGATATATCCATTTTCAGGGAGGCGAGCTTTGG 1143175 Query 1307 GCATGGTCAATTGGTGGTCGAGAATGCGACTCATGCACGTTGGGAATGGCACAGGAACGA 1366 ||||||||||| | ||| | ||||||||| ||||| | ||| ||||||||| || || Sbjct 1143176 ACATGGTCAATTTGAGGTGGTGAATGCGACCCATGCGCTCTGGACATGGCACAGAAATGA 1143235 Query 1367 CGAT 1370 |||| Sbjct 1143236 CGAT 1143239 Score = 69.8 bits (76), Expect = 9e-10 Identities = 56/68 (82%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1191 GACAAATGTGGTCCGGTTTATATTAACATCGGAGATGGTGGGAATCTAGAAGGCCTTGCT 1250 || || ||||||||||| |||| | ||| |||||||||||||| | ||||||||||| Sbjct 1133713 GATAATTGTGGTCCGGTGCATATCACCATTGGAGATGGTGGGAACCGCGAAGGCCTTGCC 1133772 Query 1251 ACCAAGTA 1258 | |||||| Sbjct 1133773 AGCAAGTA 1133780 Score = 53.6 bits (58), Expect = 7e-05 Identities = 52/67 (78%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1191 GACAAATGTGGTCCGGTTTATATTAACATCGGAGATGGTGGGAATCTAGAAGGCCTTGCT 1250 ||||| ||||| || || |||| | ||| || |||||||| || |||||||||||| Sbjct 1142904 GACAATTGTGGCCCAGTGCATATCACCATTGGCGATGGTGGAAACAGAGAAGGCCTTGCC 1142963 Query 1251 ACCAAGT 1257 | ||||| Sbjct 1142964 AGCAAGT 1142970 Score = 48.2 bits (52), Expect = 0.003 Identities = 43/54 (80%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 290 TCAGGTGCATATATCTCTGGTTGGGCCGGACAAAATGAGAATATCATGGATAAC 343 ||||||||||||||||||||| ||| || | |||||| | ||||||| || Sbjct 1125391 TCAGGTGCATATATCTCTGGTAGGGAGAGATCACATGAGAGTTACATGGATTAC 1125338 Score = 44.6 bits (48), Expect = 0.034 Identities = 29/32 (91%), Gaps = 0/32 (0%) Strand=Plus/Minus Query 1640 TAAGTTGTTATATTTTCTTTGTTGCTTTTCAA 1671 ||||||||||| |||| |||||||||||| || Sbjct 22339053 TAAGTTGTTATTTTTTTTTTGTTGCTTTTTAA 22339022 Score = 41.0 bits (44), Expect = 0.42 Identities = 42/55 (76%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 1195 AATGTGGTCCGGTTTATATTAACATCGGAGATGGTGGGAATCTAGAAGGCCTTGC 1249 ||||||||||| | ||| | | | || ||||| ||||| | |||||| ||||| Sbjct 1111479 AATGTGGTCCGATGTATGTGACGGTTGGTGATGGCGGGAACCGAGAAGGGCTTGC 1111425 Score = 41.0 bits (44), Expect = 0.42 Identities = 46/60 (77%), Gaps = 4/60 (7%) Strand=Plus/Minus Query 1496 TATAAGATTATATGTTAAATGTCGATGTAGAATCGTAGATACTAAAAGTACTTATATATA 1555 |||| |||||||||||||| | || || || || ||| ||||| || ||||||||| Sbjct 6071416 TATATAATTATATGTTAAATTTTTATATATAA---TATATA-TAAAAATATTTATATATA 6071361 Score = 39.2 bits (42), Expect = 1.5 Identities = 31/36 (86%), Gaps = 1/36 (3%) Strand=Plus/Plus Query 1544 TACTTATAT-ATAGTATTGAGTATTGACAACAATAT 1578 ||||| ||| |||||||||| ||||||||| |||| Sbjct 26116265 TACTTCTATTATAGTATTGATTATTGACAATTATAT 26116300 Score = 37.4 bits (40), Expect = 5.1 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1633 TATATTTTAAGTTGTTATATTTT 1655 ||||||||||||| ||||||||| Sbjct 26325765 TATATTTTAAGTTTTTATATTTT 26325787 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1575 ATATCAAAACAGGACACAAATGTTTTGATA 1604 ||||||||||| ||| ||| | |||||||| Sbjct 30790204 ATATCAAAACATGACTCAAGTTTTTTGATA 30790233 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1621 TTATATCTCATTTATATTTT 1640 |||||||||||||||||||| Sbjct 31922698 TTATATCTCATTTATATTTT 31922679 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 42 AAAATGAAAACAAAAAGAAG 61 |||||||||||||||||||| Sbjct 32449132 AAAATGAAAACAAAAAGAAG 32449113 >Query1 on lcl|JrScfU0001| Query1 on lcl|JrScfU0001 Length=1158772 Score = 57.2 bits (62), Expect = 5e-06 Identities = 72/99 (73%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1143 CACGTTCATGCTTACGAGCGTTTTAGTCGAGTGTACCAAGATAAGTTCGACAAATGTGGT 1202 || || |||||||||||| | | | ||||||||| | | | || || ||||||| Sbjct 670653 CAGGTACATGCTTACGAGAGGTCAAATCGAGTGTATAACTACACCTTAGATCCATGTGGT 670712 Query 1203 CCGGTTTATATTAACATCGGAGATGGTGGGAATCTAGAA 1241 ||||| ||||| | | |||||||| || |||| |||| Sbjct 670713 CCGGTATATATCACAGTTGGAGATGGGGGTAATCGAGAA 670751 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 57.2 bits (62), Expect = 5e-06 Identities = 72/99 (73%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1143 CACGTTCATGCTTACGAGCGTTTTAGTCGAGTGTACCAAGATAAGTTCGACAAATGTGGT 1202 || ||||||||||| ||| | | | |||||| || | | || || || ||||||| Sbjct 10563633 CAGGTTCATGCTTATGAGAGGTCAAATCGAGTTTATAACTACAATTTAGATCCATGTGGT 10563692 Query 1203 CCGGTTTATATTAACATCGGAGATGGTGGGAATCTAGAA 1241 || |||||||| | | |||||||| || |||| |||| Sbjct 10563693 CCTGTTTATATCACAGTTGGAGATGGGGGTAATCGAGAA 10563731 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 19689087 ATTTATATTTTAAGTTATTTTATTTTC 19689061 Score = 39.2 bits (42), Expect = 1.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 1066 AGAAAGAGAGTGTGGAGATGAAAGAATCC 1094 || ||| ||||||||| |||||||||||| Sbjct 17147669 AGCAAGTGAGTGTGGAAATGAAAGAATCC 17147697 Score = 39.2 bits (42), Expect = 1.5 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Minus Query 1543 GTACTTATA-TATAGTATTGAGTATTGACAA 1572 |||||| || ||||||||||| ||||||||| Sbjct 27185335 GTACTTGTACTATAGTATTGATTATTGACAA 27185305 Score = 39.2 bits (42), Expect = 1.5 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Minus Query 1543 GTACTTATA-TATAGTATTGAGTATTGACAA 1572 |||||| || ||||||||||| ||||||||| Sbjct 27907636 GTACTTGTACTATAGTATTGATTATTGACAA 27907606 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTAC 74 ||||| ||||||||||||| || ||| || ||| Sbjct 3858099 AAAATTAAAACAAAAAGAAAGGAAAATGAGTAC 3858131 Score = 37.4 bits (40), Expect = 5.1 Identities = 35/42 (83%), Gaps = 2/42 (5%) Strand=Plus/Plus Query 1600 TGAT-ACCAA-GTCAATTAAGAATTATATCTCATTTATATTT 1639 |||| ||||| || |||||| ||| || | |||||||||||| Sbjct 7262728 TGATCACCAATGTTAATTAACAATCATGTGTCATTTATATTT 7262769 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1612 AATTAAGAATTATATCTCATTTATATTTT 1640 |||||| ||||||| ||||||||||||| Sbjct 12959771 AATTAA--ATTATATTTCATTTATATTTT 12959745 Score = 37.4 bits (40), Expect = 5.1 Identities = 40/50 (80%), Gaps = 5/50 (10%) Strand=Plus/Plus Query 1613 ATTAAGAATTA-TATCTCATTT--ATATTTTAAGTTGTTATATTTTCTTT 1659 ||||| ||||| ||| | || | ||||||||||| |||||||||| || Sbjct 28719458 ATTAACAATTACTATGTTATATCTATATTTTAAGT--TTATATTTTCATT 28719505 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 2/32 (6%) Strand=Plus/Plus Query 1623 ATATCTCATTTATATTTTAAGTTGTTATATTT 1654 ||||||||| |||||||||||| || ||||| Sbjct 31987312 ATATCTCAT--ATATTTTAAGTTATTTTATTT 31987341 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 50.0 bits (54), Expect = 8e-04 Identities = 66/92 (72%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1281 TCATTGTTTAGAGAAGCAAGTTTCGGGCATGGTCAATTGGTGGTCGAGAATGCGACTCAT 1340 ||| | ||| | ||||||||||| || |||||| | || | ||| |||| | |||||| Sbjct 36165397 TCAGTCTTTCGGGAAGCAAGTTTTGGTCATGGTGAGTTAAAGATCGTGAATTCAACTCAT 36165338 Query 1341 GCACGTTGGGAATGGCACAGGAACGACGATGA 1372 || ||| ||||| |||| || ||||| Sbjct 36165337 GCCTTCTGGAGCTGGCATCGGAATGATGATGA 36165306 Score = 46.4 bits (50), Expect = 0.010 Identities = 93/137 (68%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 1026 CATGCGCCTTGGTACAACTCCAACGAAGCTCACCAAGGAGAGAAAGAGAGTGTGGAGATG 1085 |||| |||||||| ||| ||| | ||||| ||||| || || ||| || ||| Sbjct 36165993 CATGTTCCTTGGTATAACAGTAACAAGGCTCATCAAGGTGA-----AG-GTGACGATATG 36165940 Query 1086 AAAGAATCCATGGAAACTCTTCTTTACAAAGCTCGTGTCGATTTGGTTTTTGCAGGTCAC 1145 | |||||||| | | ||||| || ||| ||| | || |||| ||||| Sbjct 36165939 ATGATGGCCATGGAACCCTTGCTTTATGCCGCCAATGTGGATATAGTACTTGCTGGTCAT 36165880 Query 1146 GTTCATGCTTACGAGCG 1162 |||||||||||||| || Sbjct 36165879 GTTCATGCTTACGAACG 36165863 Score = 42.8 bits (46), Expect = 0.12 Identities = 35/43 (81%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 1613 ATTAAGAATTATATCTCATTTATATTTTAAGTTGTTATATTTT 1655 ||||| ||| |||| | |||||||||||||| |||||||| Sbjct 4150383 ATTAAAAATAATATTATAATTATATTTTAAGTTTATATATTTT 4150341 Score = 42.8 bits (46), Expect = 0.12 Identities = 31/35 (89%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 1637 TTTTAAGTTGTTATATTTT-CTTTGTTGCTTTTCA 1670 ||||| || ||||||||| ||||||||||||||| Sbjct 17558505 TTTTATATTATTATATTTTGCTTTGTTGCTTTTCA 17558471 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1685 TATCACTTTTTGCATATTGC 1704 |||||||||||||||||||| Sbjct 13162347 TATCACTTTTTGCATATTGC 13162328 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 759 ATGGTCACTCATGGCAACCACGAGC 783 || |||| ||||||||||||||||| Sbjct 20216220 ATCGTCAATCATGGCAACCACGAGC 20216244 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1063 GAGAGAA-AGAGAGTGTGGAGATGAAAGAA 1091 |||||| |||||| ||||||||||||||| Sbjct 27361464 GAGAGATGAGAGAGAGTGGAGATGAAAGAA 27361435 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 643 AATGGGATTATGATGTTTTC 662 |||||||||||||||||||| Sbjct 36571333 AATGGGATTATGATGTTTTC 36571352 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 48.2 bits (52), Expect = 0.003 Identities = 35/41 (85%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 1122 GTCGATTTGGTTTTTGCAGGTCACGTTCATGCTTACGAGCG 1162 || ||| |||| ||||| ||||| ||||||||||| ||||| Sbjct 24737333 GTTGATGTGGTATTTGCTGGTCATGTTCATGCTTATGAGCG 24737373 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 16307143 ATTTATATTTTAAGTTATTTTATTTTC 16307117 Score = 39.2 bits (42), Expect = 1.5 Identities = 38/47 (81%), Gaps = 4/47 (9%) Strand=Plus/Plus Query 1615 TAAGAATTATATCTCATTTATATTTTAAGTTGTTA---TATTTTCTT 1658 |||| |||||| | |||| ||||||||||||||| |||| |||| Sbjct 6675132 TAAGTGTTATATTT-ATTTTTATTTTAAGTTGTTAGTTTATTATCTT 6675177 Score = 37.4 bits (40), Expect = 5.1 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1544 TACTTATA-TATAGTATTGAGTATTGACAA 1572 ||||| || ||||||||||| ||||||||| Sbjct 3401644 TACTTGTACTATAGTATTGATTATTGACAA 3401673 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTT 1654 |||||||||||||||| || ||||| Sbjct 5308566 ATTTATATTTTAAGTTATTTTATTT 5308542 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 192 ATTGTTTTGGCCGGAAATGT 211 |||||||||||||||||||| Sbjct 9132468 ATTGTTTTGGCCGGAAATGT 9132487 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTT 1654 |||||||||||||||| || ||||| Sbjct 11758089 ATTTATATTTTAAGTTATTTTATTT 11758113 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 48.2 bits (52), Expect = 0.003 Identities = 35/41 (85%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 1122 GTCGATTTGGTTTTTGCAGGTCACGTTCATGCTTACGAGCG 1162 || ||| |||| ||||||||||| ||||||||||| || || Sbjct 5532533 GTTGATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACG 5532493 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 26338963 ATTTATATTTTAAGTTATTTTATTTTC 26338937 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 134 tctctctctctATTTCGCCAAAATGG 159 ||||||||||| | |||||||||||| Sbjct 16627751 TCTCTCTCTCTCTCTCGCCAAAATGG 16627776 Score = 39.2 bits (42), Expect = 1.5 Identities = 34/41 (83%), Gaps = 1/41 (2%) Strand=Plus/Minus Query 1621 TTATATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGT 1661 ||| || ||||||||||||| | ||||||||| | ||||| Sbjct 34035663 TTACATATCATTTATATTTTTA-CTGTTATATTCTTTTTGT 34035624 Score = 37.4 bits (40), Expect = 5.1 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 1616 AAGAATTATATCTCATTTATATTTTAAGTTGTTATATTTT 1655 || ||| |||| | ||||||||||||| || |||| |||| Sbjct 7810995 AATAATAATATTTAATTTATATTTTAAATT-TTATCTTTT 7810957 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1631 TTTATATTTTAAGTTGTTATATTTT 1655 ||||||||||||||| || |||||| Sbjct 21295562 TTTATATTTTAAGTTATTTTATTTT 21295538 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 31 TACAAGTTTCCAAAATGAAAACAAAAAGAAGGGGA 65 || ||| ||||| |||||||||||||| || ||| Sbjct 32264696 TAAAAGCTTCCATTATGAAAACAAAAAGTAGCGGA 32264730 Score = 37.4 bits (40), Expect = 5.1 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 639 TCAA-AATGGGATTATGATGTTTTC 662 |||| |||||||||||||||||||| Sbjct 33165567 TCAACAATGGGATTATGATGTTTTC 33165543 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 46.4 bits (50), Expect = 0.010 Identities = 35/39 (90%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 1664 CTTTTCAACTTTTCAAATCCTTATC-ACTTTTTGCATAT 1701 |||||||||||||||||| | ||| ||||||||||||| Sbjct 11501076 CTTTTCAACTTTTCAAAT-CAAATCTACTTTTTGCATAT 11501113 Score = 41.0 bits (44), Expect = 0.42 Identities = 36/44 (82%), Gaps = 1/44 (2%) Strand=Plus/Minus Query 1613 ATTAAGAATTATATCTCATTTATATTTTAA-GTTGTTATATTTT 1655 ||||| |||||||||||| ||||||||| || | ||||||| Sbjct 24386343 ATTAAAAATTATATCTCAACAATATTTTAATTTTATAATATTTT 24386300 Score = 39.2 bits (42), Expect = 1.5 Identities = 30/35 (86%), Gaps = 2/35 (6%) Strand=Plus/Minus Query 50 AACAAAAAGAAG--GGGAAAGGATTACTACTATAT 82 || ||||||||| |||||||||||| ||| |||| Sbjct 2123345 AAGAAAAAGAAGAAGGGAAAGGATTAGTACCATAT 2123311 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1056 CACCAAGGAGAGAAAGAGAGTGTGGAGATG 1085 ||||||||||||||| | || | ||||||| Sbjct 9414079 CACCAAGGAGAGAAACAAAGGGAGGAGATG 9414108 Score = 37.4 bits (40), Expect = 5.1 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Plus Query 22 TTCCAATTTTACAAGTTTCCAAAAT 46 |||||||||| |||||||||||||| Sbjct 19081811 TTCCAATTTT-CAAGTTTCCAAAAT 19081834 Score = 37.4 bits (40), Expect = 5.1 Identities = 33/41 (80%), Gaps = 3/41 (7%) Strand=Plus/Plus Query 27 ATTTTAC---AAGTTTCCAAAATGAAAACAAAAAGAAGGGG 64 ||||||| ||| ||||| |||||||||||||| || || Sbjct 28875255 ATTTTACTAAAAGCTTCCATTATGAAAACAAAAAGTAGTGG 28875295 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 46.4 bits (50), Expect = 0.010 Identities = 50/65 (77%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 1592 AAATGTTTTGATACCAAGTCAATTAAGAA-TTATATCTCATTTATATTTTAAGTTGTTAT 1650 |||| ||| ||| || | ||||| || |||||| ||||||||||||| || |||| Sbjct 6140615 AAATTTTTAAATAAAAATTATATTAAAAAATTATATTCCATTTATATTTTATTTTATTAT 6140556 Query 1651 ATTTT 1655 ||||| Sbjct 6140555 ATTTT 6140551 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Minus Query 1624 TATCTCATTTATATTTTAAGTTGTTATATTTT 1655 ||| |||| ||||||||||||| || |||||| Sbjct 5212028 TATATCATGTATATTTTAAGTTTTTTTATTTT 5211997 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 18545381 ATTTATATTTTAAGTTATTTTATTTTC 18545407 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 28762385 ATTTATATTTTAAGTTATTTTATTTTC 28762359 Score = 39.2 bits (42), Expect = 1.5 Identities = 41/53 (77%), Gaps = 2/53 (4%) Strand=Plus/Minus Query 1612 AATTAAGAATTA--TATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTT 1662 |||||||||||| ||| |||||| | | || || ||||||||| ||| || Sbjct 6978540 AATTAAGAATTATTTATTATATTTATTTATAAATTTATTATATTTTTTTTCTT 6978488 Score = 39.2 bits (42), Expect = 1.5 Identities = 44/58 (76%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 1613 ATTAAGAATTATATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTTGCTTTTCA 1670 || || ||||||| ||||| | || | || || | ||||||||||||| |||||| Sbjct 39329376 ATCAACAATTATA-CTCATCTTTAGTATATTTTTTAATATTTTCTTTGTGAGTTTTCA 39329320 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1622 TATATCTCATTTATATTTTAAGTTGTTATA 1651 |||||||||||||| || |||||| |||| Sbjct 3684443 TATATCTCATTTATCTTAAAAGTTGCTATA 3684472 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Plus Query 40 CCAAAATGAAAACAAAAAGAAGGGGAAAG 68 |||||| |||| |||||||||||||||| Sbjct 5575069 CCAAAA--AAAAAAAAAAGAAGGGGAAAG 5575095 Score = 37.4 bits (40), Expect = 5.1 Identities = 38/48 (79%), Gaps = 5/48 (10%) Strand=Plus/Minus Query 27 ATTTTAC---AAGTTTCCAAAATGAAAACAAAAAGAA--GGGGAAAGG 69 ||||||| ||||||||| ||||||||||| || | ||||| ||| Sbjct 6629749 ATTTTACTAAAAGTTTCCATTATGAAAACAAACAGTAGTGGGGATAGG 6629702 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1622 TATATCTCATTTATATTTTAAGTTGTTATATTT 1654 |||||||||||| ||||| |||| ||| |||| Sbjct 10565526 TATATCTCATTTTTATTTAAAGTCATTAAATTT 10565494 >Query1 on lcl|JrScfU0010| Query1 on lcl|JrScfU0010 Length=58394 Score = 44.6 bits (48), Expect = 0.034 Identities = 26/27 (96%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 ||||||||| ||||||||||||||||| Sbjct 54355 ATTTATATTCTAAGTTGTTATATTTTC 54329 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 44.6 bits (48), Expect = 0.034 Identities = 26/27 (96%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 ||||||||| ||||||||||||||||| Sbjct 11789734 ATTTATATTCTAAGTTGTTATATTTTC 11789708 Score = 44.6 bits (48), Expect = 0.034 Identities = 26/27 (96%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 ||||||||| ||||||||||||||||| Sbjct 11868992 ATTTATATTCTAAGTTGTTATATTTTC 11868966 Score = 44.6 bits (48), Expect = 0.034 Identities = 26/27 (96%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 ||||||||| ||||||||||||||||| Sbjct 11974142 ATTTATATTCTAAGTTGTTATATTTTC 11974168 Score = 44.6 bits (48), Expect = 0.034 Identities = 26/27 (96%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 ||||||||| ||||||||||||||||| Sbjct 12151153 ATTTATATTCTAAGTTGTTATATTTTC 12151179 Score = 41.0 bits (44), Expect = 0.42 Identities = 37/44 (84%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 1619 AATTATA-TCTCATTTATATTTTAAGTTGTTATATTTTCTTTGT 1661 ||||||| ||| ||| |||||||| | ||||||||||||||| Sbjct 1623053 AATTATAATCTTATT-ATATTTTATTTATTTATATTTTCTTTGT 1623095 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 16111044 ATTTATATTTTAAGTTATTTTATTTTC 16111070 Score = 39.2 bits (42), Expect = 1.5 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 42 AAAATGAAAACAAAAAGAAGGGGA 65 |||||||||| ||||||||||||| Sbjct 15303337 AAAATGAAAAAAAAAAGAAGGGGA 15303314 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1633 TATATTTTAAGTTGTTATATTTTCTTTGTT 1662 ||| ||||||||||||| ||||| ||| || Sbjct 10019567 TATGTTTTAAGTTGTTAAATTTTTTTTCTT 10019538 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 42 AAAATGAAAACAAAAAGAAG 61 |||||||||||||||||||| Sbjct 13850659 AAAATGAAAACAAAAAGAAG 13850640 Score = 37.4 bits (40), Expect = 5.1 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 1627 CTCATTTATATTTT-AAGTTGTTATATTTTCTTTGTTGCTTT 1667 |||||||||||||| |||| ||| || ||| || || |||| Sbjct 17933917 CTCATTTATATTTTGAAGTGGTTTCATGTTCATTATTACTTT 17933958 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 44.6 bits (48), Expect = 0.034 Identities = 38/47 (81%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 846 CCATTTGAAGAGAGTGGCTCGAGCTCGAATTTGTACTATTCTTTCAA 892 |||| |||||||||||| ||| || | |||||||||||||| || Sbjct 20776788 CCATCTGAAGAGAGTGGATCGTCATCCACATTGTACTATTCTTTTAA 20776742 Score = 42.8 bits (46), Expect = 0.12 Identities = 57/76 (75%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 12 CAAATACATTTTCCAATTTTACAAGTTTCCAAAATGAAAACAAAAAGAAGGGGAAAGGAT 71 |||| |||||| |||||| | || ||||| |||||||||||| || ||| || Sbjct 18731067 CAAAGTCATTTT--AATTTTTTTATTTAAAAAAATTGAAACAAAAAGAAAGGAAAATGAG 18731010 Query 72 TACTACTAT-ATAACA 86 ||| ||||| |||||| Sbjct 18731009 TAC-ACTATCATAACA 18730995 Score = 41.0 bits (44), Expect = 0.42 Identities = 67/94 (71%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 1143 CACGTTCATGCTTACGAGCGTTTTAGTCGAGTGTACCAAGATAAGTTCGACAAATGTGGT 1202 || || |||||||| ||||| | | | |||| || | ||| || || |||||| Sbjct 18698788 CAGGTGCATGCTTATGAGCGCATGAATAGAGTTTATAACTATACATTAGATTCATGTGGA 18698847 Query 1203 CCGGTTTATATTAACA-TCGGAGATGGTGGGAAT 1235 || || || |||||| | ||||||||||| ||| Sbjct 18698848 CCTGTCTAC-TTAACAGTTGGAGATGGTGGAAAT 18698880 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 28145885 ATTTATATTTTAAGTTATTTTATTTTC 28145911 Score = 41.0 bits (44), Expect = 0.42 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 33 CAAGTTTCCAAAATGAAAACAAAAAGAAGGG-GAAAG 68 |||| || ||||| |||||||||||||||| ||||| Sbjct 33887028 CAAGATTACAAAAGAAAAACAAAAAGAAGGGAGAAAG 33886992 Score = 39.2 bits (42), Expect = 1.5 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 1599 TTGATACCAAGTCAATTAAGAATTATAT 1626 |||||| |||||||||| |||||||||| Sbjct 8962849 TTGATAGCAAGTCAATT-AGAATTATAT 8962875 Score = 39.2 bits (42), Expect = 1.5 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Plus Query 39 TCCAAAATGA-AAACAAAAAGAAGGGGAAAGGA 70 |||||||| | |||||||||||| || |||||| Sbjct 14710103 TCCAAAATCAGAAACAAAAAGAACGGAAAAGGA 14710135 Score = 39.2 bits (42), Expect = 1.5 Identities = 53/74 (72%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 855 GAGAGTGGCTCGAGCTCGAATTTGTACTATTCTTTCAACGTTTATGGAGTCCACATTATA 914 ||||||||||| | ||||| ||||| ||||| | | | ||||| || |||| Sbjct 18697562 GAGAGTGGCTCTAAGAGTAATTTCTACTACTCTTTTGATGCTGGAGGAGTACATTTTATC 18697621 Query 915 ATGTTGGGGTCATA 928 |||||||| |||| Sbjct 18697622 ATGTTGGGAGCATA 18697635 Score = 39.2 bits (42), Expect = 1.5 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 1633 TATATTTTAAGTTGTTATATTTTCTTTGTTGCTTTTCAA 1671 ||||||||||||| |||| |||| ||| || |||| || Sbjct 37167823 TATATTTTAAGTTTTTATTTTTTATTTTTTATTTTTTAA 37167785 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1065 GAGAAAGAGAGTGTGGAGATGAAAGA 1090 |||| |||||| |||||||||||||| Sbjct 45056917 GAGAGAGAGAGAGTGGAGATGAAAGA 45056892 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 1628 TCATTTATATTTTAAGTTGTTATATTTTCTT 1658 |||| ||||||||||||| |||| |||| || Sbjct 48070726 TCATCTATATTTTAAGTTTTTATTTTTTATT 48070696 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1060 AAGGAGAGAAAGAGAGTGTGGAGATG 1085 || |||||| |||||||||||||||| Sbjct 50001202 AAAGAGAGAGAGAGAGTGTGGAGATG 50001227 Score = 37.4 bits (40), Expect = 5.1 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 1631 TTTATATTTTAAGTTGTTATATTTTCTTTGTTGCTTTTCAACTTT 1675 ||||| |||| || || |||||| || ||||||||||| ||| Sbjct 674884 TTTATTGTTTATTTTATTTTATTTTTTTGATTGCTTTTCAAGTTT 674840 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1061 AGGAGAGAAAGAGAGTGTGGAGATGAAAGA 1090 ||||||||||||||| | ||||||| ||| Sbjct 1750244 AGGAGAGAAAGAGAGAGCAGAGATGAGAGA 1750273 Score = 37.4 bits (40), Expect = 5.1 Identities = 41/54 (76%), Gaps = 2/54 (4%) Strand=Plus/Minus Query 1614 TTAAGAATTATATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTTGCTTT 1667 |||||| || | | | ||| | ||||||||||| | |||||||| || |||| Sbjct 10521233 TTAAGAGTTTTTTTT--TTTTTTTTTTAAGTTGTCTTTTTTTCTTTCTTTCTTT 10521182 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTAC 74 ||||| ||||||||||||| || ||| || ||| Sbjct 15738785 AAAATTAAAACAAAAAGAAAGGAAAATGAGTAC 15738753 Score = 37.4 bits (40), Expect = 5.1 Identities = 39/48 (81%), Gaps = 5/48 (10%) Strand=Plus/Plus Query 1611 CAATTAAGAATTA-TATCT--CATTTATATTTTAAGTTGTTATATTTT 1655 ||||||| ||||| ||| | ||| |||||||||||| || |||||| Sbjct 19010636 CAATTAACAATTACTATGTTACATCTATATTTTAAGT--TTCTATTTT 19010681 Score = 37.4 bits (40), Expect = 5.1 Identities = 39/48 (81%), Gaps = 5/48 (10%) Strand=Plus/Plus Query 1611 CAATTAAGAATTA-TATCT--CATTTATATTTTAAGTTGTTATATTTT 1655 ||||||| ||||| ||| | ||| |||||||||||| || |||||| Sbjct 19013025 CAATTAACAATTACTATGTTACATCTATATTTTAAGT--TTCTATTTT 19013070 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 31 TACAAGTTTCCAAAATGAAAACAAAAAGAAGGGGA 65 || ||||||||| ||||||||||| || || ||| Sbjct 20867500 TAAAAGTTTCCATCATGAAAACAAAGAGGAGTGGA 20867466 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTT 1654 |||||||||||||||| || ||||| Sbjct 30497123 ATTTATATTTTAAGTTATTTTATTT 30497099 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 42.8 bits (46), Expect = 0.12 Identities = 26/28 (93%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1063 GAGAGAAAGAGAGTGTGGAGATGAAAGA 1090 |||||| ||||||||||||||||| ||| Sbjct 28747438 GAGAGAGAGAGAGTGTGGAGATGAGAGA 28747411 Score = 41.0 bits (44), Expect = 0.42 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Plus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTACTACTAT 80 ||||| ||||||||||||| || ||| || ||| ||||| Sbjct 11129157 AAAATTAAAACAAAAAGAAAGGAAAATGAGTAC-ACTAT 11129194 Score = 39.2 bits (42), Expect = 1.5 Identities = 41/52 (79%), Gaps = 3/52 (6%) Strand=Plus/Plus Query 1612 AATTAAGAATTA-TATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTT 1662 ||||| ||||| ||| |||||| |||||| || |||||||||||||| Sbjct 25233995 AATTATGAATTTGTATAATATTTATTTTTTAAATTA--ATATTTTCTTTGTT 25234044 Score = 37.4 bits (40), Expect = 5.1 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 1122 GTCGATTTGGTTTTTGCAGGTCACGTTCATGCTTACGA 1159 || ||||| || ||||| || ||||||||||| || || Sbjct 1043566 GTTGATTTCGTATTTGCTGGGCACGTTCATGCCTATGA 1043603 Score = 37.4 bits (40), Expect = 5.1 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 1628 TCATTTATATTTTAAGTTGTTATATTTT 1655 ||||||||||||||| || |||||||| Sbjct 4054270 TCATTTATATTTTAAATTTATATATTTT 4054243 Score = 37.4 bits (40), Expect = 5.1 Identities = 39/49 (80%), Gaps = 2/49 (4%) Strand=Plus/Plus Query 1606 CAAGTCAATTAAGAATTATATCTCATTTATATTTTAAGTTGTTATATTT 1654 || || ||||| | |||| || | |||| ||||||||||| ||||| || Sbjct 5731859 CACGTTAATTA-GTATTAAATAT-ATTTTTATTTTAAGTTTTTATAATT 5731905 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/34 (85%), Gaps = 2/34 (6%) Strand=Plus/Plus Query 1629 CATTTATATTTTAAGTTGTTATATTTTCTTTGTT 1662 |||||||| ||| || |||||||||||||||| Sbjct 9707063 CATTTATAAATTA--TTCTTATATTTTCTTTGTT 9707094 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1685 TATCACTTTTTGCATATTGC 1704 |||||||||||||||||||| Sbjct 9710431 TATCACTTTTTGCATATTGC 9710412 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 42.8 bits (46), Expect = 0.12 Identities = 33/38 (87%), Gaps = 1/38 (3%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTCTTTGTTGCTTT 1667 ||||||||||| ||| ||||||||||||| ||| ||| Sbjct 21797975 ATTTATATTTTGGGTT-TTATATTTTCTTTCTTGTTTT 21797939 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 9359651 ATTTATATTTTAAGTTATTTTATTTTC 9359677 Score = 37.4 bits (40), Expect = 5.1 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 43 AAATGAAAACAAAAAGAAGGGGAAA 67 |||||||||||||||||| || ||| Sbjct 873453 AAATGAAAACAAAAAGAAAGGAAAA 873429 Score = 37.4 bits (40), Expect = 5.1 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 1620 ATTATATCTCATTTATATTTTAAGTTGTTATATTTTCTTT 1659 |||||| | ||||||||||||| || |||| |||| ||| Sbjct 3214036 ATTATAAATTATTTATATTTTAAATTATTAT-TTTTGTTT 3213998 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 38 TTCCAAAATGAAAACAAAAAGAAGGGGAAA 67 ||| ||| ||||| ||||||||||||||| Sbjct 5587227 TTCAAAAGAGAAAAGAAAAAGAAGGGGAAA 5587256 Score = 37.4 bits (40), Expect = 5.1 Identities = 40/52 (77%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 1531 TAGATACTAAAAGTACTTATATATAGTATT-GAGTATTGACAACAATATCAA 1581 || ||||||| |||| | ||||||||||| |||| ||||||| | ||| Sbjct 22085707 TATATACTAATAGTATTACTATATAGTATTACTATATTAACAACAACAACAA 22085758 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 41.0 bits (44), Expect = 0.42 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 26 AATTTTACAAGTTTCCAAAATGAAAACAAAAA 57 ||||||||||||||| |||| |||| ||||| Sbjct 14138998 AATTTTACAAGTTTCTAAAAAAAAAAAAAAAA 14139029 Score = 39.2 bits (42), Expect = 1.5 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1 TAAGTTTTGGTCAAATACATTTTCCAATTTT 31 |||||||| |||||||||||| ||||||| Sbjct 15903580 TAAGTTTTCCTCAAATACATTTGTCAATTTT 15903610 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1661 TTGCTTTTCAACTTTTCAAATC-CTTATCACT 1691 |||||||||| ||||||||||| ||| |||| Sbjct 4598504 TTGCTTTTCAGCTTTTCAAATCACTTTCCACT 4598535 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1618 GAATTATATCTC-ATTTATATTTTAAGTTGTT 1648 ||| | |||||| ||||||| ||||||||||| Sbjct 4603423 GAAGTGTATCTCTATTTATAGTTTAAGTTGTT 4603454 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 32 ACAAGTTTCCAAAATGAAAA 51 |||||||||||||||||||| Sbjct 5360571 ACAAGTTTCCAAAATGAAAA 5360590 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 23971766 ATTTATATTTTAAGTTATTTTATTTTC 23971740 Score = 39.2 bits (42), Expect = 1.5 Identities = 36/45 (80%), Gaps = 2/45 (4%) Strand=Plus/Plus Query 1621 TTATATCTCATTTATA--TTTTAAGTTGTTATATTTTCTTTGTTG 1663 ||| || || |||||| ||||||||||| | |||| ||||| || Sbjct 16436301 TTAGATTTCTTTTATAATTTTTAAGTTGTGAAATTTACTTTGATG 16436345 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTACTA 76 ||||| |||||||||||| || ||| || ||||| Sbjct 4838132 AAAATTGAAACAAAAAGAAAGGAAAATGAGTACTA 4838098 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/34 (85%), Gaps = 2/34 (6%) Strand=Plus/Minus Query 1057 ACCAAGGAGAGAAAGAGAGTGTGGAGATGAAAGA 1090 |||||| |||||||||| |||||||||| ||| Sbjct 6537053 ACCAAGATGAGAAAGAGA--GTGGAGATGAGAGA 6537022 Score = 37.4 bits (40), Expect = 5.1 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1621 TTATATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTTGCT 1665 |||| ||| ||||||||||| || |||| |||| ||| ||||| Sbjct 6721817 TTATTTCT-ATTTATATTTTTTGTACTTATTTTTTATTTATTGCT 6721774 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Plus Query 1612 AATTAAGAATTATATCTCATTTATATTTT 1640 |||||| ||||||| ||||||||||||| Sbjct 13620059 AATTAA--ATTATATTTCATTTATATTTT 13620085 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 72 TACTACTATATAACACTGTGTCCCTAATTCATTCT 106 || ||||| | |||||| || | |||||||||||| Sbjct 21463720 TATTACTACAAAACACTCTGACTCTAATTCATTCT 21463686 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 41.0 bits (44), Expect = 0.42 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTTC 1656 |||||||||||||||| || ||||||| Sbjct 18185390 ATTTATATTTTAAGTTATTTTATTTTC 18185416 Score = 39.2 bits (42), Expect = 1.5 Identities = 35/43 (81%), Gaps = 1/43 (2%) Strand=Plus/Plus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTACTACTATATAA 84 ||||| |||||||||||| | ||| |||||| ||||| ||| Sbjct 4220136 AAAATTGAAACAAAAAGAAAGAAAAATGATTAC-ACTATCTAA 4220177 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1630 ATTTATATTTTAAGTTGTTATATTTT 1655 |||||||||||||||| || |||||| Sbjct 20155874 ATTTATATTTTAAGTTATTTTATTTT 20155899 Score = 39.2 bits (42), Expect = 1.5 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 43 AAATGAAAACAAAAAGAAGGGGAAAGGAT 71 |||||| | |||||||||||||||| ||| Sbjct 31842139 AAATGACACCAAAAAGAAGGGGAAAAGAT 31842167 Score = 37.4 bits (40), Expect = 5.1 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 1612 AATTAAGAATTATATCTCATTTATATTTT 1640 |||||| ||||||| ||||||||||||| Sbjct 10483275 AATTAA--ATTATATTTCATTTATATTTT 10483249 Score = 37.4 bits (40), Expect = 5.1 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 1625 ATCTCATTTATATTTTAAGTTGTTATATTTTCTTT 1659 ||||||||||| | | ||||| ||||||||||| Sbjct 11986157 ATCTCATTTATTTCTATTGTTGTGATATTTTCTTT 11986123 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 923 GTCATACACAGATTTTGAGC 942 |||||||||||||||||||| Sbjct 28442448 GTCATACACAGATTTTGAGC 28442467 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1619 AATTATATCTCATTTATATTTTAAGTTGTTATA 1651 ||||||||||||||||| ||| | || ||||| Sbjct 30069472 AATTATATCTCATTTATTTTTACAATTTTTATA 30069440 Score = 37.4 bits (40), Expect = 5.1 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 1667 TTCAACTTTTCAAATCCTTA-TCACTTTTTGCATATT 1702 |||||||||||||||| | | |||| |||| || ||| Sbjct 30308071 TTCAACTTTTCAAATCATAATTCACGTTTTTCAAATT 30308107 Score = 37.4 bits (40), Expect = 5.1 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Plus Query 1619 AATTATATCTCATTTATATTTTAAGTTGTTATATTTTCTT 1658 |||||||| | |||||||||||| || || |||||| || Sbjct 31088254 AATTATATTTAATTTATATTTTATTTTATT-TATTTTTTT 31088292 Score = 37.4 bits (40), Expect = 5.1 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 42 AAAATGAAAACAAAAAGAAGGGGAAAGGATTAC 74 ||||| |||||||||||| || ||| |||||| Sbjct 31247309 AAAATTGAAACAAAAAGAAAGGAAAATGATTAC 31247341 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Minus Query 1623 ATATCTCATTTATATTTTAAGTTGTTATATTTTCTTTGTT 1662 |||| |||||||||||||| || |||||| | ||| || Sbjct 32314183 ATATATCATTTATATTTTATTTTCCTATATTATTTTTTTT 32314144 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 39.2 bits (42), Expect = 1.5 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1615 TAAGAATTATATCTCATTTATATTTT 1640 ||| |||||||||||| ||||||||| Sbjct 1827381 TAAAAATTATATCTCAATTATATTTT 1827356 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 37.4 bits (40), Expect = 5.1 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1585 AGGACACAAATGTTTTGATACCAAGTCAATTAAGAATTAT 1624 ||||| | ||||| | ||| ||||| |||||||||||| Sbjct 5242069 AGGACTAACATGTTATTATAGAAAGTCCATTAAGAATTAT 5242108 Score = 37.4 bits (40), Expect = 5.1 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 32 ACAAGTTTCCAAAATGAAAA 51 |||||||||||||||||||| Sbjct 13955962 ACAAGTTTCCAAAATGAAAA 13955943 Score = 37.4 bits (40), Expect = 5.1 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 876 TTGTACTATTCTTTCAACGTTTATGGA 902 |||| ||||| |||||||||||||||| Sbjct 14451294 TTGT-CTATTATTTCAACGTTTATGGA 14451269 Score = 37.4 bits (40), Expect = 5.1 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1069 AAGAGAGTGTGGAGATGAAAGAATCCAT 1096 |||||||| ||| || |||||||||||| Sbjct 24747815 AAGAGAGTTTGGGGAGGAAAGAATCCAT 24747842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893967559496 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2