BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=1828 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr5D 313 5e-83 lcl|Jr6D 98.7 2e-18 lcl|Jr4D 50.0 9e-04 lcl|Jr7S 46.4 0.011 lcl|JrScfU0010 41.0 0.45 lcl|Jr5S 41.0 0.45 lcl|Jr3D 41.0 0.45 lcl|Jr2S 41.0 0.45 lcl|Jr2D 41.0 0.45 lcl|Jr8S 39.2 1.6 lcl|Jr8D 39.2 1.6 lcl|Jr7D 39.2 1.6 lcl|Jr4S 39.2 1.6 lcl|Jr1D 39.2 1.6 lcl|Jr6S 37.4 5.5 lcl|Jr3S 37.4 5.5 lcl|Jr1S 37.4 5.5 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 313 bits (346), Expect = 5e-83 Identities = 412/571 (72%), Gaps = 0/571 (0%) Strand=Plus/Minus Query 641 AGGCGACCTAGGCCAAACCGAATGGACAGCAGCAACGTTATCTCATATAAATAGCCAAGA 700 ||| ||||| || ||||| |||||||| || |||| || || || |||| | || Sbjct 1112193 AGGAGACCTGGGGCAAACTGAATGGACCGCTTCAACCCTACAACACATCGATAGTAAGGA 1112134 Query 701 CTACGACGTGTTTCTACTTCCTGGAGACCTATCCTACGCCGACACTCACCAGCCACTCTG 760 |||||| |||||| | | || ||||| |||| |||||||| || ||||| || || Sbjct 1112133 CTACGATGTGTTTTTGTTACCCGGAGATTTATCATACGCCGATGGCCAACAGCCCCTTTG 1112074 Query 761 GGACTCCTTTGGTCGCCTAGTGGAGCCACTAGCGAGCAAGCGTCCTTGGATGGTTACTGA 820 |||||| || || |||||||| |||||| |||| | || || |||||||| || || Sbjct 1112073 GGACTCGTTCGGACGCCTAGTTGAGCCATACGCGACCCGCCGCCCATGGATGGTGACCGA 1112014 Query 821 AGGAAACCACGAAATCGAATTCTTCCCAATCATTGAACACACAACCTTCAAGTCATACAA 880 ||| |||||||| || || | |||||||||| | | | ||||| || ||||| Sbjct 1112013 AGGCAACCACGAGATTGAGACCATCCCAATCATCCACCCCTACGGCTTCAGATCCTACAA 1111954 Query 881 TGCTCGGTGGCTCATGCCTCACACCGAGAGCTTCTCTACCTCCAACCTGTACTACTCTTT 940 ||| |||||| ||||| ||| || || || ||||| ||| |||| ||||| || Sbjct 1111953 TGCCAGGTGGCGAATGCCGCACGAGGAAAGTGGATCGACCTCAAACTTGTATTACTCATT 1111894 Query 941 TGACGTAGCCGGTGTCCACACTGTTATGCTTGGTTCTTACACCGACTTTGACTGTGAATC 1000 |||||| || || |||| | | ||| | || ||||| || || ||||| ||| || Sbjct 1111893 TGACGTTGCTGGGACTCACATTATAATGTTAGGATCTTATACTGAGTTTGATGCTGACTC 1111834 Query 1001 CGATCAGTATCAATGGCTCCAGGCCGATCTAGCAAAGGTTGACCGTAAAACGACGCCGTG 1060 |||||| | ||||| |||||||| | || || |||||| | || | ||||| || Sbjct 1111833 GTCTCAGTACAAGTGGCTTGAGGCCGATTTGGCCAACGTTGACAGGAAGAAAACGCCATG 1111774 Query 1061 GGTGGTGGTGTTGCTGCACGCCCCGTGGTACAACACAAACGAGGCACATGAAGGTGAAGG 1120 | | | ||| | |||| ||||| ||||| ||||| || |||||| |||||||||| Sbjct 1111773 GATCTTTGTGCTCTTGCATGCCCCCTGGTATAACACTAATACAGCACATCAAGGTGAAGG 1111714 Query 1121 AGAGAGCATGAGGGAAGCTATGGAGTCTCTGCTCTTTAATGCTCGAGTCGACGTCGTCTT 1180 ||| |||||||| |||||||||| |||| | ||| || || |||||||| || || Sbjct 1111713 AGAAAGCATGAGAAAAGCTATGGAAGAGTTGCTGTATAAGGCACGGGTCGACGTGGTTTT 1111654 Query 1181 TTCTGGCCATGTTCATGCCTACGAACGTTTC 1211 | | |||||||||||||| || ||||| ||| Sbjct 1111653 TGCAGGCCATGTTCATGCATATGAACGATTC 1111623 Score = 248 bits (274), Expect = 2e-63 Identities = 404/576 (70%), Gaps = 12/576 (2%) Strand=Plus/Minus Query 641 AGGCGACCTAGGCCAAACCGAATGGACAGCAGCAACGTTATCTCATATAAATAGCCAAGA 700 |||||||||||| || || |||||||| ||| |||| || | ||| | |||| |||| Sbjct 1123984 AGGCGACCTAGGACAGACGGAATGGACTGCATCAACCCTAGCACATGTTGATAGTGAAGA 1123925 Query 701 CTACGACGTGTTTCTACTTCCTGGAGACCTATCCTACGCCGACACTCACCAGCCACTCTG 760 ||||||||||||| | | ||||| || |||| |||||| | || || || || || Sbjct 1123924 CTACGACGTGTTTTTGTTACCTGGTGATTTATCATACGCCAATGGCCAGCAACCTCTGTG 1123865 Query 761 GGACTCCTTTGGTCGCCTAGTGGAGCCACTA-GCGAGCAAGCGTCCTTGGATGGTTACTG 819 |||||| || || |||||||||||||| ||| |||||| || || |||||||| || | Sbjct 1123864 GGACTCTTTCGGCCGCCTAGTGGAGCC-CTACGCGAGCCGCCGCCCATGGATGGTGACCG 1123806 Query 820 AAGGAAACCACGAAATCGA----ATTCTTCCCAATCATTGAACACACAACCTTCAAGTCA 875 |||| |||||||| ||||| || | ||| | ||| | | | ||||| | | Sbjct 1123805 AAGGGAACCACGACATCGAGATCATGATACCCGACCAT----CCCCAAGGCTTCACGGCC 1123750 Query 876 TACAATGCTCGGTGGCTCATGCCTCACACCGAGAGCTTCTCTACCTCCAACCTGTACTAC 935 |||||| ||||||| ||||| || ||||| || | || ||| | || ||| Sbjct 1123749 TACAATAGCAGGTGGCTGATGCCATACGAAGAGAGTGGATCCAAATCGAACTTATATTAC 1123690 Query 936 TCTTTTGACGTAGCCGGTGTCCACACTGTTATGCTTGGTTCTTACACCGACTTTGACTGT 995 |||||||| || || || |||| | ||| | ||||||||||| | ||| | ||| Sbjct 1123689 TCTTTTGATGTTGCTGGGACTCACATAATAATGTTGGGTTCTTACACGAAGTTTTA-TGT 1123631 Query 996 -GAATCCGATCAGTATCAATGGCTCCAGGCCGATCTAGCAAAGGTTGACCGTAAAACGAC 1054 || || |||||| ||||||| || | ||| | || | || | | || | ||| Sbjct 1123630 GGAGTCGCCTCAGTACAAATGGCTGGAGTCTGATTTGGCTCAAGTCAATAGGAAGAAGAC 1123571 Query 1055 GCCGTGGGTGGTGGTGTTGCTGCACGCCCCGTGGTACAACACAAACGAGGCACATGAAGG 1114 || ||||| | || || |||| || || ||||| || || || || ||| |||| Sbjct 1123570 CCCCTGGGTTCTTGTTCTGTTGCATGCGCCTTGGTATAATACTAATACAGCTCATCAAGG 1123511 Query 1115 TGAAGGAGAGAGCATGAGGGAAGCTATGGAGTCTCTGCTCTTTAATGCTCGAGTCGACGT 1174 |||||||| | |||||| || | |||||| ||| | | ||| || || ||||| | Sbjct 1123510 CGAAGGAGAAATCATGAGACAAACAATGGAGAAGCTGTTGTATAAGGCACGGGTCGATTT 1123451 Query 1175 CGTCTTTTCTGGCCATGTTCATGCCTACGAACGTTT 1210 || ||| |||| ||||||||||| || |||||||| Sbjct 1123450 GGTTTTTGCTGGACATGTTCATGCATATGAACGTTT 1123415 Score = 140 bits (154), Expect = 6e-31 Identities = 344/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 702 TACGACGTGTTTCTACTTCCTGGAGACCTATCCTACGCCGACACTCACCAGCCACTCTGG 761 |||||| || | ||||| || |||||| | | || || || ||||||| | ||| Sbjct 1142211 TACGACATGCTGCTACTGCCAGGAGACTTGGCTTATGCTGATTTCTACCAGCCTTTTTGG 1142270 Query 762 GACTCCTTTGGTCGCCTAGTGGAGCCACTAGCGAGCAAGCGTCCTTGGATGGTTACTGAA 821 || || || || | || ||||||||||| || ||| |||| ||||||||||| || || Sbjct 1142271 GATTCATTCGGCAGGCTTGTGGAGCCACTGGCAAGCCAGCGGCCTTGGATGGTAACCCAA 1142330 Query 822 GGAAACCACGAAATCGAATTCTTCCCAATCATTGAACACACAACCTTCAAGTCATACAAT 881 || |||||||| | || | || |||| | || | |||||| | |||||| Sbjct 1142331 GGCAACCACGAGGTTGAGAAGATTCCGGTCATCCACTCCAAACCCTTCACAGCCTACAAT 1142390 Query 882 GCTCGGTGGCTCATGCC-TCACACCGAGAGCTTCTCTACCTCCAACCTGTACTACTCTTT 940 || | |||| |||||| | | | |||| || ||||||||| ||||| ||||| Sbjct 1142391 GCAAGATGGCGCATGCCATTTGAAC-AGAGTGGATCGGACTCCAACCTATACTATTCTTT 1142449 Query 941 TGACGTAGCCGGTGTCCACACTGTTATGCTTGGTTCTTACACCGACTTTGACTGTGAATC 1000 | | ||||| || || || | | | ||| | |||| ||||| || ||||| | || Sbjct 1142450 TAATGTAGCTGGGGTTCATATTATCATGTTGAGTTCGTACACGGATTTTGATCCTAGTTC 1142509 Query 1001 CGATCAGTATCAATGGCTCCAGGCCGATCTAGCAAAGGTTGACCGTAAAACGACGCCGTG 1060 | |||||| | ||| | |||| ||| | | || |||| || |||| || || || Sbjct 1142510 ACAACAGTATAAGTGGTTAGAGGCAGATATGGGGCAGATTGATCGGAAAATAACTCCATG 1142569 Query 1061 GGTGGTGGTGTTGCTGCACGCCCCGTGGTACAACACAAACGAGGCACATGAAGGTGAAGG 1120 | | || ||| | | || || || |||||||| || || || ||| | ||||| Sbjct 1142570 GATAGTAGTGCTTGTTCATGCGCCATGGTACAATACGAATACTGCTCATCAGGGTGAGAA 1142629 Query 1121 AGAG-AGCATGAG-GGAAG----CTATGGAGTCTCTGCTCTTTAATGCTCGAGTCGACGT 1174 |||| | ||||| |||| | ||||| || || | | | ||||| || || || Sbjct 1142630 AGAGTCGGATGAGATGAAGGCTTCAATGGAAGGGCTACTTTATCAAGCTCGCGTGGATGT 1142689 Query 1175 CGTCTTTTCTGGCCATGTTCATGCCTACGAACGTTT 1210 || || |||| ||||| || || || || || || Sbjct 1142690 TGTTTTCACTGGACATGTGCACGCATATGAGCGCTT 1142725 Score = 120 bits (132), Expect = 6e-25 Identities = 347/524 (66%), Gaps = 20/524 (4%) Strand=Plus/Plus Query 700 ACTACGACGTGTTTCTACTTCCTGGAGACCTATCCTACGCCGACACTCAC-CAGCCACTC 758 |||||||| || | |||||||| |||||| |||| || || || |||| ||||| | Sbjct 1132883 ACTACGACATGCTGCTACTTCCAGGAGACTTATCGTATGCAGAT-CTCAATCAGCCTTTA 1132941 Query 759 TGGGACTCCTTTGGTCGCCTAGTGGAGCCACTAGCGAGCAAGCGTCCTTGGATGGTTACT 818 ||||| || ||||| | || || |||||||| || ||| || | ||||||||||| || Sbjct 1132942 TGGGATTCATTTGGAAGGCTTGTCGAGCCACTGGCTAGCCAGAGGCCTTGGATGGTGACG 1133001 Query 819 GAAGGAAACCACGAAATCGAATTCTTCCCAATCATTGAACACACAACCTTCAAGTCATAC 878 |||| ||||| || || || ||||| |||| | || | |||||| | ||| Sbjct 1133002 CAAGGCAACCATGAGATTGAGAAGATCCCACTCATCCACAACGAACCCTTCACAGCCTAC 1133061 Query 879 AATGCTCGGTGGCTCATGCC--TCACACCGAGAGCTTCTCTACCTCCAACCTGTACTACT 936 ||||| | |||| |||||| || || |||| ||| || || || | ||| | Sbjct 1133062 AATGCAAGATGGCGCATGCCATTCGAAC--AGAGTGGCTCGGGATCAAATCTCTTCTATT 1133119 Query 937 CTTTTGACGTAGCCGGTGTCCACACTGTTATGCTTGGTTCTTACACCGACTTTGACTGTG 996 |||| | || || || || || | ||| | ||||| || || || ||||| | Sbjct 1133120 CTTTCAATGTCGCTGGAGTGCATGTCATCATGTTGGGTTCGTATACAGATTTTGATCCTA 1133179 Query 997 AATCCGATCAGTATCAA-TGGCTCCAGGCCGATCTAGC-AAAGGTTGACCGTAAAACGAC 1054 |||| | |||| |||| ||| | |||| || || || ||| |||| | || | || Sbjct 1133180 AATCGGCACAGT-TCAAGTGGTTAGAGGCAGA-CTTGCGGAAGATTGATAGGAACAAAAC 1133237 Query 1055 GCCGTGGGTGGTGGTGTTGCTGCACGCCCCGTGGTACAACACAAACGAGGCACATGAAGG 1114 |||||| || ||| | | || || || |||||||| | || || ||| | || Sbjct 1133238 TCCGTGGACAGTAGTGCTTATTCATGCGCCCTGGTACAATTCTAATACAGCTCATCAGGG 1133297 Query 1115 TGAAGGAGAGAG--------CATGAGGGAAGCTATGGAGTCTCTGCTCTTTAATGCTCGA 1166 ||| || |||| ||||| || | | ||||| | || | ||||| Sbjct 1133298 TGA--GAAAGAGTCGATTGACATGAAGGCATCCATGGAAGGGTTACTTTACCGAGCTCGT 1133355 Query 1167 GTCGACGTCGTCTTTTCTGGCCATGTTCATGCCTACGAACGTTT 1210 || || || || ||| | || ||||| |||||||| || || || Sbjct 1133356 GTGGATGTTGTTTTTGCCGGACATGTACATGCCTATGAGCGCTT 1133399 Score = 102 bits (112), Expect = 2e-19 Identities = 200/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 348 CAGGTGCACATATCGTTAGCGGGTAAGGACCACATGAGAGTAACATTCATAACGGAAGAC 407 ||||| || || || || ||||| | || || || |||| | | || || || | | Sbjct 1113639 CAGGTACATATTTCATTGGCGGGGATCGATCATATACGAGTTTCGTGGATTACTGAGGCC 1113580 Query 408 AACAAGGTGGAGTCGGTAGTGGAATACGGTAAACAACCAGGAAAGTACGACGGAAAAGCC 467 || | | | | || || ||||||||||| ||| || | ||||| ||| | | | | Sbjct 1113579 AAACATGCGAAATCAGTCGTGGAATACGGGAAAGAATCCGGAAAATACAATGCATTGGAA 1113520 Query 468 ACCGGAGAATGCACTTCTTACAAATACTTCTTCTACAAATCCGGCAAAATCCACCATGTC 527 ||||| ||| || || || | ||||| || ||| | || ||| | |||||||| || Sbjct 1113519 ACCGGTGAACACAAATCGTATACGTACTTTTTTTACCACTCAGGCGAGATCCACCACGTT 1113460 Query 528 AAGATCGGACCTCTCCAAGCCAACACCACTTACTACTACCGTTGTGGCGGCAACGGCCCT 587 ||||| ||||| | | ||| |||||| || | |||| | ||||| || |||||| Sbjct 1113459 AAGATTGGACCCTTGGAGCCCAGCACCACCTATTTCTACAGGTGTGGAGGTTCGGGCCCT 1113400 Query 588 GAATTTTCTTTCAAGACCCCTCCATCAACTTTTCCTGTCGAGTTCGCAATCGTAGG 643 || ||||| |||| || || || ||| ||||| | || || ||| | || || Sbjct 1113399 GAGTTTTCCTTCAGAACACCGCCTTCAGGATTTCCCATTGAATTTGCAGTTGTTGG 1113344 Score = 86.0 bits (94), Expect = 1e-14 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1302 TTCAAGAAGCCTCCTTCACCTTTATCGGAATTTCGCGAATCGAGTTTTGGACATGGGAGA 1361 |||||||| || |||| ||| | ||| ||||| || | || |||||||||||| | Sbjct 1110827 TTCAAGAACCCAACTTCCCCTCTCTCGTTGTTTCGGGAGGCAAGCTTTGGACATGGGCGT 1110768 Query 1362 TTGAAGGTTATGGACGGGAAACGAGCACATTGGTCATGGCATAGAAACAATGACTCGAAC 1421 |||| || | | | || ||||||||||||||||| | ||||||||||| ||| Sbjct 1110767 TTGAGTGTATTAAATCAAACACATGCACATTGGTCATGGCACCGCAACAATGACTCCAAC 1110708 Query 1422 TCACTTCTTGCTGATGAGGTCTGGCTTGATAGTCTTAGCA 1461 || || | || || |||||||| | || ||| | |||| Sbjct 1110707 GCAGTTGTGGCAGACCAGGTCTGGTTAGAAAGTTTAAGCA 1110668 Score = 80.6 bits (88), Expect = 5e-13 Identities = 190/287 (66%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 348 CAGGTGCACATATCGTTAGCGGGTAAGGACCACATGAGAGTAACATTCATAACGGAAGAC 407 |||||||| ||||| | | || | || ||||||||||| |||| || || || ||| Sbjct 1125390 CAGGTGCATATATCTCTGGTAGGGAGAGATCACATGAGAGTTACATGGATTACTGATGAC 1125331 Query 408 AACAAGGTGGAGTCGGTAGTGGAATACGGTAAACAACCAGGAAAGTACGACGGAAAAGCC 467 || | | || | |||||||| || | | ||| || || || | ||| || Sbjct 1125330 AAACAAGCATCTTCAATTGTGGAATATGGAACGGAGAAAGGGAAATATGATGCAAAGGCA 1125271 Query 468 ACCGGAGAATGCACTTCTTACAAATACTTCTTCTACAAATCCGGCAAAATCCACCATGTC 527 | |||||| || || | |||||| || | || || || |||||||| Sbjct 1125270 AGGGGAGAACATACAGAATATACTTACTTCAAGTATAGTTCAGGTAAGATCCACCACACT 1125211 Query 528 AAGATCGGACCTCTCCAAGCCAACACCACTTACTACTACCGTTGTGGCGGCAACGGCCCT 587 ||||| ||||| | | ||| |||||| || | |||| | ||||| || ||||| Sbjct 1125210 AAGATTGGACCATTGGAGCCCAGCACCACCTATTTCTACAGATGTGGAGGTTCAGGCCCC 1125151 Query 588 GAATTTTCTTTCAAGACCCCTCCATCAACTTTTCCTGTCGAGTTCGC 634 ||||| || |||||||| || || || || |||||| | || || || Sbjct 1125150 GAATTCTCCTTCAAGACACCCCCTTCGACATTTCCTATTGAATTTGC 1125104 Score = 62.6 bits (68), Expect = 1e-07 Identities = 87/122 (71%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 1344 AGTTTTGGACATGGGAGATTGAAGGTTATGGACGGGAAACGAGCACATTGGTCATGGCAT 1403 || ||||| ||||| | |||| | | || ||| | || ||| ||||||||||||| Sbjct 1121820 AGCTTTGGTCATGGACGCTTGAGGATATTGAACGAAACACATGCATATTGGTCATGGCAC 1121761 Query 1404 AGAAACAATGACTCGAACTCACTTCTTGCTGATGAGGTCTGGCTTGATAGTCTTAGCACA 1463 | |||||||| | || ||||| |||| ||| |||||||| || || | ||||| Sbjct 1121760 CGCAACAATGATGCAGACGCACTTGTTGCAGATACAGTCTGGCTAGAAAGCTTAAGCACT 1121701 Query 1464 TC 1465 || Sbjct 1121700 TC 1121699 Score = 41.0 bits (44), Expect = 0.45 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 222 TTTCTTAGTTTTACTCTCTTGTTTCTT 248 |||||||||||| ||||||||||| || Sbjct 3431254 TTTCTTAGTTTTCCTCTCTTGTTTTTT 3431280 Score = 39.2 bits (42), Expect = 1.6 Identities = 42/53 (79%), Gaps = 2/53 (4%) Strand=Plus/Minus Query 1573 AACTACGAATATTCATTTTGTTACAAATTTTACTATTTTAGGCATTTCTTTTT 1625 |||| ||||||| ||| |||| ||| | || | |||||||||||| ||||| Sbjct 4427232 AACTTCGAATAT-CATGTTGTCACAGAGTTCG-TGTTTTAGGCATTTTTTTTT 4427182 Score = 37.4 bits (40), Expect = 5.5 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 25 AAAGCTTACAAAAATGTATATATG-ACATG 53 ||| ||||||||||| |||||||| ||||| Sbjct 3814380 AAAACTTACAAAAATTTATATATGTACATG 3814351 Score = 37.4 bits (40), Expect = 5.5 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 42 ATATATGACATGTTTTTGAATTATA 66 |||| ||||||||||||||| |||| Sbjct 14830807 ATATTTGACATGTTTTTGAAATATA 14830831 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1775 AAATATTCCTTTTCTTTGAATTATTTGGAAAA 1806 ||||||| |||| |||||| ||||||||||| Sbjct 14907675 AAATATTT-TTTTGTTTGAAGTATTTGGAAAA 14907705 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1775 AAATATTCCTTTTCTTTGAATTATTTGGAAAA 1806 ||||||| |||| |||||| ||||||||||| Sbjct 15244245 AAATATTT-TTTTGTTTGAAGTATTTGGAAAA 15244275 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1775 AAATATTCCTTTTCTTTGAATTATTTGGAAAA 1806 ||||||| |||| |||||| ||||||||||| Sbjct 15483958 AAATATTT-TTTTGTTTGAAGTATTTGGAAAA 15483988 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 98.7 bits (108), Expect = 2e-18 Identities = 251/377 (67%), Gaps = 14/377 (4%) Strand=Plus/Minus Query 464 AGCCACCGGAGAATGCACTTCTTACAAATACTTCTTCTACAAATCCGGCAAAATCCACCA 523 ||||| |||||| |||| ||||| | || | ||||| | || || || || ||||| Sbjct 36168181 AGCCAAAGGAGAAAGCACATCTTATAGTTATCTATTCTATAGTTCAGGGAAGATACACCA 36168122 Query 524 T---GTCAAGATCGGACCTCTCCAAGCCAACACCACTTACTACTACCGTTGTGGCGGCAA 580 |||| |||| ||||| || ||||| | |||| ||||| ||||| || | Sbjct 36168121 CACAGTCA---TCGGGCCTCTGGAACATAACACAATCTACTTTTACCGATGTGGAGGACA 36168065 Query 581 CGGCCCTGAATTTTCTTTCAAGACCCCTCCA--TCAACTTTTCCTGTCGAGTTCGCAATC 638 || || || || || |||||||||||| |||| |||||||| || || | Sbjct 36168064 AGGACCCGACTTACAGTTAAAGACCCCTCCAGCTCAA--TTTCCTGTTACTTTTGCTGTG 36168007 Query 639 GTAGGCGACCTAGGCCAAACCGAATGGACAGCAGCAACGTTATCTCATATAAATAGCCAA 698 | ||| || || || ||||| | ||||| | | || || || || | | Sbjct 36168006 GCAGGGGATCTGGGTCAAACTGGCTGGACCAAAACGACTCTAGACCACATTGACCGGTGC 36167947 Query 699 GACTACGACGTGTTTCTACTTCCTGGAGACCTATCCTACGCCGACACTCACCAGCCACTC 758 |||| || || |||||||||||| ||||| || || || || || || | | Sbjct 36167946 AACTATGATTTGCATCTACTTCCTGGGGACCTCTCATATGCTGATTATCTGCAACACCGA 36167887 Query 759 TGGGACTCCTTTGGTCGCCTAGTGGAGCCACTAGC--GAGCAAGCGTCCTTGGATGGTTA 816 |||||| |||||||| || ||| |||| || || | |||| | || |||||||||| Sbjct 36167886 TGGGACACCTTTGGTGAGCTGGTGCAGCCCCTTGCAAGTGCAA--GGCCATGGATGGTTA 36167829 Query 817 CTGAAGGAAACCACGAA 833 | ||||| ||||| ||| Sbjct 36167828 CAGAAGGGAACCATGAA 36167812 Score = 71.6 bits (78), Expect = 3e-10 Identities = 125/182 (69%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 1026 GATCTAGCAAAGGTTGACCGTAAAACGACGCCGTGGGTGGTGGTGTTGCTGCACGCCCCG 1085 ||||| |||| || ||||| |||| ||| || ||| || | ||| | | || | || Sbjct 36166044 GATCTCTCAAAAGTGGACCGGAAAAAGACACCTTGGCTGATCGTGCTATTCCATGTTCCT 36165985 Query 1086 TGGTACAACACAAACGAGGCACATGAAGGTGAAGGAGAGAGCATGAGGGAAGCTATGGAG 1145 ||||| |||| ||| |||| ||| |||||||||| || |||| | || ||||| Sbjct 36165984 TGGTATAACAGTAACAAGGCTCATCAAGGTGAAGGTGACGATATGATGATGGCCATGGAA 36165925 Query 1146 TCTCTGCTCTTTAATGCTCGAGTCGACGTCGTCTTTTCTGGCCATGTTCATGCCTACGAA 1205 | |||| | | || || || | || || |||| ||||||||||| |||||| Sbjct 36165924 CCCTTGCTTTATGCCGCCAATGTGGATATAGTACTTGCTGGTCATGTTCATGCTTACGAA 36165865 Query 1206 CG 1207 || Sbjct 36165864 CG 36165863 Score = 37.4 bits (40), Expect = 5.5 Identities = 49/66 (74%), Gaps = 9/66 (14%) Strand=Plus/Plus Query 1588 TTTTGTTACAAATTTTACTATTTTAGGCATTTCTTTTTGTGTTTAAGGATGTATTTGGAG 1647 ||||||| |||||||||||||| ||| ||||||| ||| || |||||| | Sbjct 114438 TTTTGTTTGAAATTTTACTATTT----GTTTTATTTTTGTTATTA---ATTTATTTG--G 114488 Query 1648 TTTCTA 1653 |||||| Sbjct 114489 TTTCTA 114494 Score = 37.4 bits (40), Expect = 5.5 Identities = 38/48 (79%), Gaps = 4/48 (8%) Strand=Plus/Minus Query 1604 ACTATTTTAGGCATTTCTTTTTGTGTTTAAGGATGTATTTGGAGTTTC 1651 ||||| || | | |||||||||||||| ||| |||| | ||||||| Sbjct 12227691 ACTATCTT-GACCTTTCTTTTTGTGTTCAAG---GTATGTAGAGTTTC 12227648 Score = 37.4 bits (40), Expect = 5.5 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1750 ATCAATAAGAATTTTCCTACTCGTT 1774 |||||||||||||||| |||| ||| Sbjct 20777390 ATCAATAAGAATTTTCTTACTAGTT 20777366 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 50.0 bits (54), Expect = 9e-04 Identities = 36/42 (86%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 1166 AGTCGACGTCGTCTTTTCTGGCCATGTTCATGCCTACGAACG 1207 ||| || || |||||| |||| |||||||||||||| ||||| Sbjct 28097905 AGTTGATGTTGTCTTTGCTGGTCATGTTCATGCCTATGAACG 28097946 Score = 42.8 bits (46), Expect = 0.13 Identities = 69/96 (72%), Gaps = 4/96 (4%) Strand=Plus/Plus Query 1116 GAAGGAGAGAGCATGAGGGAAGCTATGGAGTCTCTGCTCTTT--AATGCTCGAGTCGACG 1173 |||||||| |||||||| | ||| | || || ||| | | | || || ||| ||| Sbjct 7758058 GAAGGAGAAAGCATGAGAGTGGCTTTTGAATC-CTGGTTTGTTGAAAGCAA-AGTTGACA 7758115 Query 1174 TCGTCTTTTCTGGCCATGTTCATGCCTACGAACGTT 1209 | || || | || |||||||||||||| || |||| Sbjct 7758116 TTGTGTTAGCCGGTCATGTTCATGCCTATGAGCGTT 7758151 Score = 41.0 bits (44), Expect = 0.45 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 194 AAACAAGAAGATGAAACTTTTTGGTCTCTTTCTTA 228 ||| ||||| ||||| ||||||||||||| |||| Sbjct 10683183 AAATAAGAAAATGAATTTTTTTGGTCTCTTCCTTA 10683149 Score = 37.4 bits (40), Expect = 5.5 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1683 TCCAACAAGGTTTAGTATATCATATCATAC 1712 || |||||||||| | || ||||||||||| Sbjct 14297954 TCAAACAAGGTTTTGAATTTCATATCATAC 14297925 Score = 37.4 bits (40), Expect = 5.5 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1289 CCTTGCTTTATCATTCAAGA 1308 |||||||||||||||||||| Sbjct 25612361 CCTTGCTTTATCATTCAAGA 25612342 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 46.4 bits (50), Expect = 0.011 Identities = 70/96 (73%), Gaps = 4/96 (4%) Strand=Plus/Plus Query 1116 GAAGGAGAGAGCATGAGGGAAGCTATGGAGTCTCTGCTCTTT--AATGCTCGAGTCGACG 1173 |||||||| |||||||| | || | || || ||| | | | || || ||| ||| Sbjct 19374312 GAAGGAGAAAGCATGAGAGTGACTTTTGAATC-CTGGTTTGTTGAAAGCAA-AGTTGACA 19374369 Query 1174 TCGTCTTTTCTGGCCATGTTCATGCCTACGAACGTT 1209 | || ||| |||| |||||||||||||| || |||| Sbjct 19374370 TTGTTTTTGCTGGTCATGTTCATGCCTATGAGCGTT 19374405 Score = 41.0 bits (44), Expect = 0.45 Identities = 37/44 (84%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 32 ACAAAAATGTATATATG-ACATGTTTTTGAATTATAAATAAAGA 74 ||| | ||||||||||| |||| ||||| || |||||| ||||| Sbjct 11938281 ACACACATGTATATATGTACATATTTTT-AAATATAAAGAAAGA 11938323 Score = 41.0 bits (44), Expect = 0.45 Identities = 37/44 (84%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 32 ACAAAAATGTATATATG-ACATGTTTTTGAATTATAAATAAAGA 74 ||| | ||||||||||| |||| ||||| || |||||| ||||| Sbjct 12016102 ACACACATGTATATATGTACATATTTTT-AAATATAAAGAAAGA 12016144 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 218 TCTCTTTCTTAGTTTTACTCTCTTGTTTCTTTG 250 ||||||| || ||| |||||||||||| |||| Sbjct 12609068 TCTCTTTTTTTCTTTCACTCTCTTGTTTTTTTG 12609036 Score = 37.4 bits (40), Expect = 5.5 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 1151 GCTCTTTAATGCTCGAGTCGACGTCGT 1177 |||||||||||||||||| ||| |||| Sbjct 13723613 GCTCTTTAATGCTCGAGTTGAC-TCGT 13723588 Score = 37.4 bits (40), Expect = 5.5 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 1151 GCTCTTTAATGCTCGAGTCGACGTCGT 1177 |||| ||||||||||||||||| |||| Sbjct 17059921 GCTCGTTAATGCTCGAGTCGAC-TCGT 17059946 >Query1 on lcl|JrScfU0010| Query1 on lcl|JrScfU0010 Length=58394 Score = 41.0 bits (44), Expect = 0.45 Identities = 37/44 (84%), Gaps = 2/44 (5%) Strand=Plus/Minus Query 32 ACAAAAATGTATATATG-ACATGTTTTTGAATTATAAATAAAGA 74 ||| | ||||||||||| |||| ||||| || |||||| ||||| Sbjct 8908 ACACACATGTATATATGTACATATTTTT-AAATATAAAGAAAGA 8866 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 41.0 bits (44), Expect = 0.45 Identities = 37/44 (84%), Gaps = 2/44 (5%) Strand=Plus/Minus Query 42 ATATATGACATGTTTTTGAATTATAAATAAAGAAGGAA-ATGAA 84 |||| ||||||||||||||| |||| | ||||| ||| ||||| Sbjct 15516656 ATATTTGACATGTTTTTGAAATATACA-AAAGAGCGAATATGAA 15516614 Score = 39.2 bits (42), Expect = 1.6 Identities = 44/56 (79%), Gaps = 6/56 (11%) Strand=Plus/Plus Query 1756 AAGAATTTTCCT---ACTCGTTAAATATTCCTTTTCTTTG--AATTATTTGGAAAA 1806 ||||| |||| | | || ||||| |||||||||||||| || |||||||||| Sbjct 19945035 AAGAAGTTTCTTTGGAATCTTTAAA-ATTCCTTTTCTTTGGAAAAGATTTGGAAAA 19945089 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 41.0 bits (44), Expect = 0.45 Identities = 43/54 (80%), Gaps = 2/54 (4%) Strand=Plus/Plus Query 34 AAAAATGTATATATGA-CATGTTTTTGAATTATAAATAAAGAAGGAAATGAAGT 86 ||||||| || |||| ||||||||||| |||| |||| |||||| ||||| Sbjct 36894051 AAAAATGAGTAAATGATCATGTTTTTGATGGATAACTAAAATAGGAAA-GAAGT 36894103 Score = 39.2 bits (42), Expect = 1.6 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 484 CTTACAAATACTTCTTCTACAAATCC 509 ||||||| || ||||||||||||||| Sbjct 25928991 CTTACAAGTAGTTCTTCTACAAATCC 25928966 Score = 39.2 bits (42), Expect = 1.6 Identities = 44/56 (79%), Gaps = 6/56 (11%) Strand=Plus/Plus Query 1756 AAGAATTTTCCT---ACTCGTTAAATATTCCTTTTCTTTG--AATTATTTGGAAAA 1806 ||||| |||| | | || ||||| |||||||||||||| || |||||||||| Sbjct 30314303 AAGAAGTTTCTTTGGAATCTTTAAA-ATTCCTTTTCTTTGAAAAAGATTTGGAAAA 30314357 Score = 37.4 bits (40), Expect = 5.5 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 68 ATAAAGAAGGAAATGAAGTT 87 |||||||||||||||||||| Sbjct 29950292 ATAAAGAAGGAAATGAAGTT 29950311 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 41.0 bits (44), Expect = 0.45 Identities = 28/31 (90%), Gaps = 2/31 (6%) Strand=Plus/Minus Query 30 TTACA--AAAATGTATATATGACATGTTTTT 58 ||||| ||||||||||||||||||| |||| Sbjct 1615572 TTACAGTAAAATGTATATATGACATGATTTT 1615542 Score = 39.2 bits (42), Expect = 1.6 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1589 TTTGTTACAAATTTTACTATT 1609 ||||||||||||||||||||| Sbjct 21225943 TTTGTTACAAATTTTACTATT 21225923 Score = 39.2 bits (42), Expect = 1.6 Identities = 36/43 (84%), Gaps = 2/43 (5%) Strand=Plus/Plus Query 42 ATATATGACATGTTTTTGAATTATAAATAAAGAAGGAA-ATGA 83 |||| ||||||||||||||| |||| | ||||| ||| |||| Sbjct 27630181 ATATTTGACATGTTTTTGAAATATACA-AAAGAGCGAATATGA 27630222 Score = 37.4 bits (40), Expect = 5.5 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1051 CGACGCCGTGGGTGGTGGTGTTGCTGCACG 1080 |||| | ||| ||||||| ||||||||||| Sbjct 15854210 CGACACTGTGTGTGGTGGAGTTGCTGCACG 15854239 Score = 37.4 bits (40), Expect = 5.5 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1617 TTTCTTTTTGTGTTTAAGGA 1636 |||||||||||||||||||| Sbjct 18139920 TTTCTTTTTGTGTTTAAGGA 18139901 Score = 37.4 bits (40), Expect = 5.5 Identities = 38/47 (81%), Gaps = 2/47 (4%) Strand=Plus/Plus Query 42 ATATATGACATGTTTTTGAATTATAAATAAAGAAGGAA-ATGAAGTT 87 |||| |||||||||||| || | || | |||||| ||| |||| ||| Sbjct 22044920 ATATTTGACATGTTTTTAAAATGTACA-AAAGAACGAATATGATGTT 22044965 Score = 37.4 bits (40), Expect = 5.5 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 48 GACATGTTTTTGAATTATAAATAAAGAAGGAAATGAAG 85 ||| | || |||||||||||| ||| ||||| || ||| Sbjct 28506529 GACCTCTTGTTGAATTATAAACAAATAAGGAGATAAAG 28506566 Score = 37.4 bits (40), Expect = 5.5 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 194 AAACAAGAAGATGAAACTTTTTGGTCTCTT 223 ||| ||||||||||| | |||||| ||||| Sbjct 35229308 AAAAAAGAAGATGAAGCATTTTGGACTCTT 35229337 Score = 37.4 bits (40), Expect = 5.5 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1608 TTTTAGGCATTTCTTTTTGTGTTTA 1632 ||||| |||||||||||||| |||| Sbjct 36691505 TTTTATGCATTTCTTTTTGTTTTTA 36691529 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 41.0 bits (44), Expect = 0.45 Identities = 29/32 (91%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 1592 GTTACAAATTTTACTATTTTAGGCATTTCTTT 1623 ||||||||||||||||||||| | ||||||| Sbjct 39191008 GTTACAAATTTTACTATTTTACG-TTTTCTTT 39190978 Score = 37.4 bits (40), Expect = 5.5 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1694 TTAGTATATCATATCATACCAGATAAATGT 1723 ||| ||||||||||||||| | | |||||| Sbjct 10224279 TTACTATATCATATCATACTATAAAAATGT 10224308 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 39.2 bits (42), Expect = 1.6 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 51 ATGTTTTTGAATTATAAATAA 71 ||||||||||||||||||||| Sbjct 527488 ATGTTTTTGAATTATAAATAA 527508 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 39.2 bits (42), Expect = 1.6 Identities = 36/43 (84%), Gaps = 2/43 (5%) Strand=Plus/Minus Query 42 ATATATGACATGTTTTTGAATTATAAATAAAGAAGGAA-ATGA 83 |||| ||||||||||||||| ||| | |||||| ||| |||| Sbjct 6964877 ATATTTGACATGTTTTTGAAATATGCA-AAAGAACGAATATGA 6964836 Score = 39.2 bits (42), Expect = 1.6 Identities = 27/30 (90%), Gaps = 2/30 (7%) Strand=Plus/Minus Query 27 AGCTTACAAAAATGTATATATGACATGTTT 56 |||||| ||||||||||||| |||||||| Sbjct 25515986 AGCTTAAAAAAATGTATATA--ACATGTTT 25515959 Score = 37.4 bits (40), Expect = 5.5 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 54 TTTTTGAATTATAAATAAAGAAGGA 78 |||||||| ||| |||||||||||| Sbjct 6446703 TTTTTGAAATATGAATAAAGAAGGA 6446727 Score = 37.4 bits (40), Expect = 5.5 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 58 TGAATTATAAATAAAGAAGGAAA 80 ||||||||||||| ||||||||| Sbjct 6559143 TGAATTATAAATATAGAAGGAAA 6559121 Score = 37.4 bits (40), Expect = 5.5 Identities = 45/62 (73%), Gaps = 6/62 (10%) Strand=Plus/Plus Query 210 CTTTTTGGTCTCTTTCTTAGTT------TTACTCTCTTGTTTCTTTGTCCGTTCATATCT 263 |||||||||||||| ||| || |||| ||||| |||||| ||| | ||||| Sbjct 14669934 CTTTTTGGTCTCTTCCTTCTTTTTCCTCTTACACTCTTTTTTCTTGTTCCCTCTTTATCT 14669993 Query 264 CA 265 || Sbjct 14669994 CA 14669995 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 30 TTACAAAA-ATGTATATATGACATGTTTTTGA 60 || ||||| | |||||| |||||||||||||| Sbjct 23863326 TTGCAAAAGAAGTATATTTGACATGTTTTTGA 23863295 Score = 37.4 bits (40), Expect = 5.5 Identities = 34/42 (81%), Gaps = 2/42 (5%) Strand=Plus/Plus Query 1619 TCTTTTTGTGTTTAAGGATGTATTTGGAGTTTCTATTTAAGT 1660 || |||| |||||| || |||||||||||| || |||||| Sbjct 30712753 TCATTTTAAGTTTAA--ATTTATTTGGAGTTTGTAATTAAGT 30712792 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 39.2 bits (42), Expect = 1.6 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 1784 TTTTCTTTGAATTATTTGGAAAAGGATGCGGGAGGG 1819 |||| ||| | ||||||||||||||| | ||| ||| Sbjct 2666711 TTTTTTTTTATTTATTTGGAAAAGGAGGGGGGGGGG 2666676 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 39.2 bits (42), Expect = 1.6 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 1165 GAGTCGACGTCGTCTTTTCTGGCCATGTTCATGCCTACGAA 1205 |||| || |||| ||| |||| || ||||||||||| ||| Sbjct 1043564 GAGTTGATTTCGTATTTGCTGGGCACGTTCATGCCTATGAA 1043604 Score = 37.4 bits (40), Expect = 5.5 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1148 TCTGCTCTTTAATGCTCGAGTCGACGTCGT 1177 ||||||| || |||||||||||||| |||| Sbjct 9339945 TCTGCTCGTTTATGCTCGAGTCGAC-TCGT 9339973 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 39.2 bits (42), Expect = 1.6 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 919 CCTCCAACCTGTACTACTCTTTTG 942 |||||||| ||||||||||||||| Sbjct 10470140 CCTCCAACATGTACTACTCTTTTG 10470117 Score = 37.4 bits (40), Expect = 5.5 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1616 ATTTCTTTTTGTGTTTAAGGATG 1638 ||||||||||||||||||| ||| Sbjct 7694113 ATTTCTTTTTGTGTTTAAGCATG 7694091 Score = 37.4 bits (40), Expect = 5.5 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 819 GAAGGAAACCACGAAATCGA 838 |||||||||||||||||||| Sbjct 12164488 GAAGGAAACCACGAAATCGA 12164469 Score = 37.4 bits (40), Expect = 5.5 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 214 TTGGTCTCTTTCTTAGTTTTACTCTCTTGT 243 |||||||||||||| ||||||| | |||| Sbjct 17233135 TTGGTCTCTTTCTTTCTTTTACTTTTTTGT 17233106 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 37.4 bits (40), Expect = 5.5 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 188 CTCTTTAAACAAGAAGATGAAACTTTT 214 |||||| || ||||||||||||||||| Sbjct 22861124 CTCTTTGAA-AAGAAGATGAAACTTTT 22861149 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 37.4 bits (40), Expect = 5.5 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 226 TTAGTTTTACTCTCTTGTTTCTTTGTCCGTTC 257 |||| ||||||||||| |||| || ||||||| Sbjct 11748398 TTAGCTTTACTCTCTTCTTTCATT-TCCGTTC 11748368 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 37.4 bits (40), Expect = 5.5 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 48 GACATGTTTTTGAATTATAAATAAAGAAGGAAATGAAG 85 ||| | || |||||||||||| ||| ||||| || ||| Sbjct 5728663 GACCTCTTGTTGAATTATAAACAAATAAGGAGATAAAG 5728700 Score = 37.4 bits (40), Expect = 5.5 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 1743 ATATTCGATCAATAAGAATTTTCCTACTCGTTAAATATTC 1782 |||||||||||||| |||||| |||||| | |||||| Sbjct 14751832 ATATTCGATCAATATAAATTTT-GAACTCGTAATATATTC 14751794 Score = 37.4 bits (40), Expect = 5.5 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1585 TCATTTTGTTACAAATTTT-ACTATTTTAG 1613 ||||||||||||||||||| | || ||||| Sbjct 17039670 TCATTTTGTTACAAATTTTAATTAGTTTAG 17039641 Score = 37.4 bits (40), Expect = 5.5 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1597 AAATTTTACTATTTTAGGCATTTCTTTTTGTGTTT 1631 |||| | ||| ||||||| ||| ||||||||||| Sbjct 20891958 AAATGTAACTTTTTTAGGATTTTGTTTTTGTGTTT 20891992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 960266589028 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2