BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=2335 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr6D 250 6e-64 lcl|Jr3D 219 1e-54 lcl|Jr2S 68.0 4e-09 lcl|Jr2D 68.0 4e-09 lcl|Jr7D 46.4 0.014 lcl|Jr5S 46.4 0.014 lcl|Jr5D 46.4 0.014 lcl|Jr8D 44.6 0.047 lcl|Jr6S 44.6 0.047 lcl|Jr3S 44.6 0.047 lcl|Jr1D 44.6 0.047 lcl|Jr4S 42.8 0.16 lcl|Jr8S 41.0 0.58 lcl|Jr7S 41.0 0.58 lcl|Jr4D 41.0 0.58 lcl|JrScfU0025 39.2 2.0 lcl|Jr1S 39.2 2.0 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 250 bits (276), Expect = 6e-64 Identities = 242/311 (78%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 1510 GGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGA 1569 |||| ||| | |||||||| ||||||| |||||| |||| |||| ||| ||||| |||| Sbjct 1065907 GGTATTCTACCGATTATGGCATGTTTCACTTCTGTATAGCTGACAGTGAGCATGACTGGA 1065966 Query 1570 GAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGG 1629 | || || |||| || ||| | ||||| |||| ||| ||||| || | ||| ||| | Sbjct 1065967 GGGAGGGAACAGAACAGTACAAGTTCATTGAGCATTGCCTTGCATCAGCAGATAGACAGA 1066026 Query 1630 CTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGATTGGT 1689 || || ||||| || ||| ||||| ||||| || || ||||| | || ||||||| Sbjct 1066027 AACAACCATGGTTAATCTTTGCCGCTCACCGTGTCCTTGGATATTCCTCTAATGATTGGT 1066086 Query 1690 ATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGCTCTGGC 1749 | | | || ||||| |||||||| || |||||||| || |||||||| |||||||||| Sbjct 1066087 ACGCCAAGGAGGGTTCATTTGAAGAGCCCATGGGAAGGGAAAGCTTGCAGAAGCTCTGGC 1066146 Query 1750 AGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACATGCC 1809 ||||||| | ||||||||||| || || || ||||| || ||||||||||||||||| | Sbjct 1066147 AGAAGTACAGGGTAGACATCGCATTTTATGGCCATGTCCACAACTATGAAAGAACATGTC 1066206 Query 1810 CCATTTACCAG 1820 | ||||||||| Sbjct 1066207 CTATTTACCAG 1066217 Score = 246 bits (272), Expect = 7e-63 Identities = 241/311 (77%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 1510 GGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGA 1569 |||| || | |||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct 1027333 GGTATTCAACAGATTATGGCATGTTTCGGTTTTGCATAGCTGACAGTGAACATGATTGGA 1027392 Query 1570 GAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGG 1629 | || || ||||| || ||||||||| | ||| ||| ||||| |||| || |||||| Sbjct 1027393 GGGAGGGATCAGAACAGTACCAATTCCTTAAGCATTGCCTTGCAACTGTGGATAGAAGGA 1027452 Query 1630 CTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGATTGGT 1689 || ||||||||||| ||| ||||||| | ||| || ||||| | || || |||| Sbjct 1027453 AGCAACCTTGGTTGATCTTTGCTGCTCATAGGCCTCTAGGATATTCCTCTAATGAATGGT 1027512 Query 1690 ATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGCTCTGGC 1749 ||| | || ||| | | | |||||| |||||||| || ||||||||||| |||| Sbjct 1027513 ATGCCGAGGAGGGTGCATATTCAGAACCAATGGGAAGGGACGATTTGCAAAAGCTTTGGC 1027572 Query 1750 AGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACATGCC 1809 ||||||| | |||||||| || || | || ||||| |||||||| ||||||||||||| Sbjct 1027573 AGAAGTACAGGGTAGACATTGCCTTTTTTGGCCATGTCCATAACTACGAAAGAACATGCC 1027632 Query 1810 CCATTTACCAG 1820 ||||||||||| Sbjct 1027633 CCATTTACCAG 1027643 Score = 237 bits (262), Expect = 4e-60 Identities = 239/311 (77%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 1510 GGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGA 1569 ||||||| |||||||||| ||||| || |||||| |||| || | ||| || || |||| Sbjct 1017813 GGTACTCCACGGATTATGGGATGTTCCGCTTCTGTATAGCCGATAGTGAGCAAGACTGGA 1017872 Query 1570 GAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGG 1629 | || || ||||| || ||| ||||||| ||||||| ||||| || || |||||| | Sbjct 1017873 GGGAGGGATCAGAACAGTACAGATTCATAAAGCGTTGCCTTGCGTCGGTGGACAGACAGA 1017932 Query 1630 CTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGATTGGT 1689 || ||||||||||| ||| ||| |||||||| || || || || | || ||| | Sbjct 1017933 AACAACCTTGGTTGATCTTTGCTGCCCATCGTGTCCTTGGGTACTCCTCTGACTATTATT 1017992 Query 1690 ATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGCTCTGGC 1749 | | ||||| || |||| ||| || |||||||| || |||||||||||||| |||| Sbjct 1017993 ACGCCTTGGAAGGCTCATTTGCAGAGCCCATGGGAAGGGAAAGCTTGCAAAAGCTTTGGC 1018052 Query 1750 AGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACATGCC 1809 ||||||| || || ||||| || || || || || || |||||||||||||| ||||||| Sbjct 1018053 AGAAGTACAAGGTGGACATTGCCTTTTATGGCCACGTCCATAACTATGAAAGGACATGCC 1018112 Query 1810 CCATTTACCAG 1820 || ||||| || Sbjct 1018113 CCGTTTACGAG 1018123 Score = 228 bits (252), Expect = 2e-57 Identities = 237/311 (76%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 1510 GGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGA 1569 |||| || | |||||||| |||||||| || || |||| |||| |||||||||||||| Sbjct 1053332 GGTATTCAACAGATTATGGCATGTTTCGATTTTGCATAGCTGACAGTGAACATGATTGGA 1053391 Query 1570 GAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGG 1629 | || || ||||| || |||| |||| | |||| || ||||| |||| || |||||| Sbjct 1053392 GGGAGGGATCAGAACAGTACCGATTCCTTGAGCACTGCCTTGCAACTGTGGATAGAAGGA 1053451 Query 1630 CTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGATTGGT 1689 || ||||||||||| ||| ||||||| | ||| || ||||| | || || |||| Sbjct 1053452 AGCAACCTTGGTTGATCTTTGCTGCTCATAGGCCTCTAGGATATTCCTCTAATGAATGGT 1053511 Query 1690 ATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGCTCTGGC 1749 ||| | || ||| | | | ||| || |||||||| || ||||| ||||| |||| Sbjct 1053512 ATGCCGAGGAGGGTGCATATTCAGAGCCAATGGGAAGGGATGATTTGCAGAAGCTTTGGC 1053571 Query 1750 AGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACATGCC 1809 ||||||| | |||||||| || || | || ||||| |||||||| ||||||||||||| Sbjct 1053572 AGAAGTACAGGGTAGACATTGCCTTTTTTGGCCATGTCCATAACTACGAAAGAACATGCC 1053631 Query 1810 CCATTTACCAG 1820 ||||||||||| Sbjct 1053632 CCATTTACCAG 1053642 Score = 224 bits (248), Expect = 2e-56 Identities = 239/315 (76%), Gaps = 14/315 (4%) Strand=Plus/Plus Query 1510 GGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGA 1569 |||| || | |||||||| ||||| | |||||| |||| |||| ||||||||||||| Sbjct 1004434 GGTATTCAACAGATTATGGCATGTTCCACTTCTGTATAGCCGACAGCGAACATGATTGGA 1004493 Query 1570 GAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTG----TAGACAGA 1625 | || || || || || ||| |||||||||| ||||| || || | |||||| | Sbjct 1004494 GGGAGGGTTCTGAACAGTACAGATTCATAGAGAACTGTCTCGCATCAGCCGATAGACAAA 1004553 Query 1626 AGGGCTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGAT 1685 | ||||| |||||||| ||| |||||||||||| || |||||||| | | | Sbjct 1004554 AA----CAGCCATGGTTGATCTTTGCTGCTCATCGTGTGCTTGGTTATTCCTCCACACAA 1004609 Query 1686 TGGTATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGCTC 1745 ||| || || || || |||| || || |||||||| || ||||||||||||||| Sbjct 1004610 TGG------CAGGATGGCTCGTTTGGGGAGCCCATGGGAAGGGAAAGCTTGCAAAAGCTC 1004663 Query 1746 TGGCAGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACA 1805 ||||||||||| ||||||||||| || |||| || || | |||||||| || |||||| Sbjct 1004664 TGGCAGAAGTACAAAGTAGACATTGCATTCTTTGGCCACATCCATAACTACGAGAGAACA 1004723 Query 1806 TGCCCCATTTACCAG 1820 ||||||||||||||| Sbjct 1004724 TGCCCCATTTACCAG 1004738 Score = 199 bits (220), Expect = 1e-48 Identities = 166/203 (82%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1182 GAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCACTGAT 1241 || || |||||||| || ||||||| | |||||||||| || || ||||| ||||| ||| Sbjct 1003599 GAACGTGATGGTTCTAATGAGTACAGTAATTATCAGCCAGGGTCACTCAATACCACCGAT 1003658 Query 1242 CAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCACTTAC 1301 ||||||||||| |||||| | ||||| ||||| ||||| ||||||||||| ||||| || Sbjct 1003659 CAACTCATCAAAGACTTGGATAACATCGACATAGTTTTTCACATTGGAGACATCACCTAT 1003718 Query 1302 GCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTGCTTCT 1361 |||||||| ||||| ||||||||||| ||||||||| | || || || | ||||| || Sbjct 1003719 GCAAATGGATACATATCGCAGTGGGACCAGTTCACATCACAGGTCGAGCACATTGCATCA 1003778 Query 1362 ACTGTTCCATACATGGTCGCAAG 1384 || || ||||| ||| | ||||| Sbjct 1003779 ACAGTACCATATATGATTGCAAG 1003801 Score = 196 bits (216), Expect = 1e-47 Identities = 168/208 (81%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 1177 AGGGAGAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCA 1236 ||| |||||| ||||| ||||| || || | | |||||||||| ||||| ||||| || | Sbjct 1017069 AGGCAGAGCGCGATGGCTCAAATGAATATAGTAATTATCAGCCGGGTTCACTCAATACTA 1017128 Query 1237 CTGATCAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCA 1296 | || |||||||||||||||||| | ||||||||||| |||||||| || |||||||| Sbjct 1017129 CCGACCAACTCATCAAGGACTTGGAAAACATTGACATAGTTTTCCATATAGGAGATATAT 1017188 Query 1297 CTTACGCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTG 1356 | || |||||||| ||||||||||| ||||| || ||||| | || || || || |||| Sbjct 1017189 CATATGCAAATGGATACATCTCGCAATGGGACCAATTCACTTCACAGGTGGAGCCAATTG 1017248 Query 1357 CTTCTACTGTTCCATACATGGTCGCAAG 1384 | || ||||| ||||| ||| | ||||| Sbjct 1017249 CATCCACTGTCCCATATATGATTGCAAG 1017276 Score = 181 bits (200), Expect = 3e-43 Identities = 162/203 (80%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1182 GAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCACTGAT 1241 ||||| ||||| ||||| ||||||| ||||||||||| || | || || ||||| | Sbjct 1064822 GAGCGTGATGGGTCAAATGAGTACAGCGATTATCAGCCAGGAGCACTGAATACCACCAAC 1064881 Query 1242 CAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCACTTAC 1301 || ||||| |||||||||| || |||||||| |||||||| ||||||||||| ||||| Sbjct 1064882 CAGCTCATTGAGGACTTGAAAAATATTGACATAGTTTTCCATATTGGAGATATAACTTAT 1064941 Query 1302 GCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTGCTTCT 1361 |||||||| |||||||| |||||||| || ||||| | || || || || ||||| || Sbjct 1064942 GCAAATGGATACATCTCACAGTGGGACCAATTCACGTCACAGGTGGAGCCCATTGCATCA 1065001 Query 1362 ACTGTTCCATACATGGTCGCAAG 1384 |||| ||||| ||| | ||||| Sbjct 1065002 GCTGTCCCATATATGATTGCAAG 1065024 Score = 172 bits (190), Expect = 1e-40 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1182 GAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCACTGAT 1241 || || |||||||||| | ||| |||||||||||| || ||||| || || ||||| Sbjct 1052762 GAACGTGATGGTTCAACCATGTATGCTGATTATCAGCCAGGATCTCTTAATACTACTGAC 1052821 Query 1242 CAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCACTTAC 1301 ||||||||||||||||| || ||||| ||||| ||||||| ||||||||| | |||| Sbjct 1052822 CAACTCATCAAGGACTTAAAAAACATCGACATAGTTTTCCTTATTGGAGATTTAGCTTAT 1052881 Query 1302 GCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTGCTTCT 1361 |||||||| |||||||| |||||||| || |||| | |||||||| || ||||| || Sbjct 1052882 GCAAATGGATACATCTCACAGTGGGACCAATTCATGTCACAAGTTGAGCCCATTGCATCA 1052941 Query 1362 ACTGTTCCATACATGGTCGCAAG 1384 |||| |||| ||| | || || Sbjct 1052942 GCTGTCCCATTTATGATTGCGAG 1052964 Score = 167 bits (184), Expect = 6e-39 Identities = 211/289 (73%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 1840 AGAAAAGTCAC--TACTCAGGAGCCTTCAAAGGAACTATACACGTGGTTGTTGGTGGTGC 1897 ||||||||||| || ||||| || | || || || || ||||| || ||||| || | Sbjct 1066532 AGAAAAGTCACATTATTCAGGCACCATGAATGGCACAATTCACGTTGTGGTTGGAGGGGG 1066591 Query 1898 AGGAAGTCACTTGTCTTCGTTCAGCTCGCTGAAACCCAAGTGGAGTATCTTCAGAGACTA 1957 ||| || ||||| || ||||| | | | |||||| ||||| || | ||||||||| Sbjct 1066592 AGGGAGCCACTTATCAGAGTTCACCACAGCAATACCCAACTGGAGCATTTACAGAGACTA 1066651 Query 1958 TGATTACGGGTTTGTGAAGTTGACGGCTTTTGATCACTCCTCTCTTCTCTTCGAATACAA 2017 ||| | ||| ||||| || | || || || ||||||| || || |||||||| ||||| Sbjct 1066652 TGACTTCGGCTTTGTCAAACTCACTGCATTCAATCACTCTTCCCTGCTCTTCGAGTACAA 1066711 Query 2018 GAAAAGCAGCAATGGAGCTGTACATGACTCCTTCACTATCTTTAGAGAATACAGAGATGT 2077 ||||||| | | || ||| |||||||||| || || | || ||||||| |||||| Sbjct 1066712 GAAAAGCCGTGACGGCAATGTCTATGACTCCTTTACCATTTCGAGGGAATACAAAGATGT 1066771 Query 2078 CTTGGCTTGTGTTCGAGATAGCTGCGAGCCAACCACATTAGCTTCATGA 2126 |||||||||||| | || || || | ||||| || | || || ||| Sbjct 1066772 CTTGGCTTGTGTGCATGACAGTTGTGCACCAACTACTCTGGCGTCGTGA 1066820 Score = 159 bits (176), Expect = 9e-37 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1182 GAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCACTGAT 1241 || || |||||||||| ||| |||||||||||| || ||||| || || || || Sbjct 1026763 GAACGTGATGGTTCAACTATGTATGCTGATTATCAGCCAGGATCTCTTAATACTACCGAC 1026822 Query 1242 CAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCACTTAC 1301 ||||||||||||||||| || || || ||||| ||||||| ||||||||| | |||| Sbjct 1026823 CAACTCATCAAGGACTTAAAAAATATCGACATAGTTTTCCTTATTGGAGATTTAGCTTAT 1026882 Query 1302 GCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTGCTTCT 1361 |||||||| |||||||| |||||||| || |||| | || ||||| || ||||| || Sbjct 1026883 GCAAATGGATACATCTCACAGTGGGACCAATTCATGTCACAGGTTGAGCCCATTGCATCA 1026942 Query 1362 ACTGTTCCATACATGGTCGCAAG 1384 |||| |||| ||| | ||||| Sbjct 1026943 GCTGTCCCATTTATGATTGCAAG 1026965 Score = 158 bits (174), Expect = 3e-36 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 1847 TCACTACTCAGGAGCCTTCAAAGGAACTATACACGTGGTTGTTGGTGGTGCAGGAAGTCA 1906 ||| || |||||| | | | ||||| || || || |||||||| || ||||| | || Sbjct 1018543 TCATTATTCAGGAACTGTAGAGGGAACAATCCATGTTGTTGTTGGAGGGGCAGGGTGCCA 1018602 Query 1907 CTTGTCTTCGTTCAGCTCGCTGAAACCCAAGTGGAGTATCTTCAGAGACTATGATTACGG 1966 ||| || ||||||| || |||||| |||||| | | |||||| ||||| | || Sbjct 1018603 CTTATCAAAGTTCAGCCAAGAGACACCCAAATGGAGTCTTTACAGAGATTATGACCATGG 1018662 Query 1967 GTTTGTGAAGTTGACGGCTTTTGATCACTCCTCTCTTCTCTTCGAATACAAGAAAAGCAG 2026 ||||| || |||| || || |||||||||| || |||||||| |||||||||||| | Sbjct 1018663 ATTTGTCAAACTGACAGCGTTCAATCACTCCTCCCTCCTCTTCGAGTACAAGAAAAGCCG 1018722 Query 2027 CAATGGAGCTGTACATGACTCCTTCACTATCTTTAGAGAATACAGAGATGTCTTGGCTTG 2086 | |||| ||| ||| | |||||| || ||||| |||| ||||||| ||||||| Sbjct 1018723 CGATGGCAACGTATCTGATTACTTCACCATAACAAGAGAGTACAAAGATGTCCTGGCTTG 1018782 Query 2087 TGTTCGAGATAGCTGCGAGCCAACCAC 2113 ||| | ||| | || || || ||||| Sbjct 1018783 TGTGCATGATGGTTGTGAACCCACCAC 1018809 Score = 154 bits (170), Expect = 4e-35 Identities = 219/308 (71%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 1818 CAGAACCAATGTATGGACAATGAGAAAAGTCACTACTCAGGAGCCTTCAAAGGAACTATA 1877 ||||| || ||| || | || || | | ||||||||| || | | || ||||| || Sbjct 1004900 CAGAATCAGTGTGTGAATAAAGAAAGATCTCACTACTCGGGCACAGTGAATGGAACAATC 1004959 Query 1878 CACGTGGTTGTTGGTGGTGCAGGAAGTCACTTGTCTTCGTTCAGCTCGCTGAAACCCAAG 1937 ||| | |||||||| || | ||| || ||||| || || | | | | ||||| Sbjct 1004960 CACATAGTTGTTGGAGGGGGAGGGAGCCACTTATCAGAATTTGGGCCAGTTCAGCCCAAT 1005019 Query 1938 TGGAGTATCTTCAGAGACTATGATTACGGGTTTGTGAAGTTGACGGCTTTTGATCACTCC 1997 |||||| | | |||||| ||| | || ||||| || |||| || || ||||||| Sbjct 1005020 TGGAGTGTTTACAGAGATCTTGACTTTGGCTTTGTCAAACTGACTGCATTCAATCACTCA 1005079 Query 1998 TCTCTTCTCTTCGAATACAAGAAAAGCAGCAATGGAGCTGTACATGACTCCTTCACTATC 2057 || ||||| ||||| ||||| || ||||| ||||| || |||| |||||||| || Sbjct 1005080 TCCCTTCTGTTCGAGTACAAAAAGAGCAGTGATGGAAAGGTTTATGATTCCTTCACCATT 1005139 Query 2058 TTTAGAGAATACAGAGATGTCTTGGCTTGTGTTCGAGATAGCTGCGAGCCAACCACATTA 2117 | || || ||||| ||||| ||||| ||||| | ||| |||| || || ||||||||| Sbjct 1005140 TCCAGGGACTACAGGGATGTGTTGGCCTGTGTACACGATGGCTGTGAACCCACCACATTA 1005199 Query 2118 GCTTCATG 2125 |||| ||| Sbjct 1005200 GCTTAATG 1005207 Score = 149 bits (164), Expect = 2e-33 Identities = 193/263 (73%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 1866 AAAGGAACTATACACGTGGTTGTTGGTGGTGCAGGAAGTCACTTGTCTTCGTTCAGCTCG 1925 || ||||| || || || || | ||| |||| ||| ||||| || || || ||| || | Sbjct 1053873 AATGGAACAATCCATGTTGTCGCTGGAGGTGGAGGTAGTCATTTATCATCCTTC-GC-CA 1053930 Query 1926 CTGAAA--CCCAAGTGGAGTATCTTCAGAGACTATGATTACGGGTTTGTGAAGTTGACGG 1983 | |||| ||||| ||||| | |||||||||||||| | || ||| || |||| | Sbjct 1053931 CAGAAATACCCAACTGGAGCCTTTTCAGAGACTATGACTTTGGCTTTACAAAACTGACAG 1053990 Query 1984 CTTTTGATCACTCCTCTCTTCTCTTCGAATACAAGAAAAGCAGCAATGGAGCTGTACATG 2043 | || | ||||| | ||| ||||| || ||||||||||| || | ||| ||| ||| Sbjct 1053991 CATTCAACCACTCTTATCTGCTCTTTGAGTACAAGAAAAGTAGTGACGGAAATGTGTATG 1054050 Query 2044 ACTCCTTCACTATCTTTAGAGAATACAGAGATGTCTTGGCTTGTGTTCGAGATAGCTGCG 2103 | |||||||| ||| || ||||||| ||||||||||||||||||| ||||| || | Sbjct 1054051 ATTCCTTCACCATCACAAGGGAATACACCGATGTCTTGGCTTGTGTTCATGATAGTTGTG 1054110 Query 2104 AGCCAACCACATTAGCTTCATGA 2126 |||| ||| || ||| | ||| Sbjct 1054111 CACCAAGCACTTTGGCTGCTTGA 1054133 Score = 131 bits (144), Expect = 4e-28 Identities = 188/263 (71%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 1866 AAAGGAACTATACACGTGGTTGTTGGTGGTGCAGGAAGTCACTTGTCTTCGTTCAGCTCG 1925 || ||||| || || || || | ||| |||| ||| ||||| || || || || | || Sbjct 1027869 AATGGAACAATCCATGTTGTCGCTGGAGGTGGAGGTAGTCATTTATCATCCTTTGCCACG 1027928 Query 1926 CTGAAACCCAAGTGGAGTATCTTCAGAGACTATGATTACGGGTTTGTGAAGTTGACGGCT 1985 | ||||| ||||| | |||||||||||||| | || ||| || |||| || Sbjct 1027929 GAAATACCCAGCTGGAGCCTTTTCAGAGACTATGACTTTGGCTTTACAAAACTGACAGCA 1027988 Query 1986 TTTGATCACTCCTCTCTTCTCTTCGAATACAAGAAAAGCAGCAATGG--AGCTGTACATG 2043 || | ||||| | ||| ||||| || ||||||||||| || | || || |||| || Sbjct 1027989 TTCAACCACTCTTATCTGCTCTTTGAGTACAAGAAAAGTAGTGACGGGAAGGTGTA--TG 1028046 Query 2044 ACTCCTTCACTATCTTTAGAGAATACAGAGATGTCTTGGCTTGTGTTCGAGATAGCTGCG 2103 | || ||||| || | || ||||||| ||||||||||||||||||| ||||| || | Sbjct 1028047 ATTCATTCACCATTATGAGGGAATACACTGATGTCTTGGCTTGTGTTCATGATAGTTGTG 1028106 Query 2104 AGCCAACCACATTAGCTTCATGA 2126 |||| ||| || || || ||| Sbjct 1028107 CACCAAGCACTTTGGCCTCTTGA 1028129 Score = 102 bits (112), Expect = 2e-19 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1383 AGTGGCAACCACGAGCGGGATTGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCT 1442 ||||| || || || || || ||||||||| | ||||||||||||| || || || Sbjct 1065117 AGTGGTAATCATGAACGTGACTGGCCAGACACAGGATCCTTCTATGAAAATACGGATTCA 1065176 Query 1443 GGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCT 1502 || || || ||||| || | ||| || |||||||| || ||||||||||||| | ||| Sbjct 1065177 GGGGGAGAATGTGGTGTGCTTGCTGAGACCATGTTCTATGTTCCTGCTGAGAATAGAGCC 1065236 Query 1503 AAGTTCTGGTA 1513 ||||||||||| Sbjct 1065237 AAGTTCTGGTA 1065247 Score = 96.9 bits (106), Expect = 9e-18 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1383 AGTGGCAACCACGAGCGGGATTGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCT 1442 |||||||| || || || ||| |||| | ||||||||||||| ||| || || Sbjct 1003889 AGTGGCAATCATGAACGAGATGTACCAGGGACAGGATCCTTCTATGACTCTAATGATTCA 1003948 Query 1443 GGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCT 1502 || || || ||||| || | ||| || ||||||||| || ||||||||||||||| ||| Sbjct 1003949 GGTGGTGAATGTGGTGTCCTTGCCGAGACCATGTTTTATGTTCCTGCTGAGAACAGAGCC 1004008 Query 1503 AAGTTCTGGTA 1513 ||||| ||||| Sbjct 1004009 AAGTTTTGGTA 1004019 Score = 91.5 bits (100), Expect = 4e-16 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 1042 TCAAGTACACATACAGGATGGGTCATGAGTTGATGAATGGATCA-ATAGTTTGGAGCAAG 1100 ||| |||||| || |||||||||||| || |||||| || ||| | |||||||| Sbjct 1026431 TCAGGTACACTTATAGGATGGGTCATCTCTTATCGAATGGCTCGTATA-TCTGGAGCAAA 1026489 Query 1101 AATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAATC 1160 | | |||||| || || |||||||||||||| ||||| |||||| |||||||| Sbjct 1026490 TCCTACTCTTTCAGATCATCCCCTTATCCTGGACAGGACTCACCACAACGTGTCATAATA 1026549 Query 1161 TTCGGGGACATGGGGAAGGGAG 1182 || || ||| | ||||||| || Sbjct 1026550 TTTGGCGACCTTGGGAAGGTAG 1026571 Score = 91.5 bits (100), Expect = 4e-16 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1042 TCAAGTACACATACAGGATGGGTCATGAGTTGATGAATGGATCA-ATAGTTTGGAGCAAG 1100 ||| |||||| ||||||||||| ||| || |||||||| ||| | |||||||| Sbjct 1063281 TCAGGTACACTTACAGGATGGGCCATCTTTTATCTAATGGATCGTATA-TCTGGAGCAAA 1063339 Query 1101 AATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAATC 1160 | | |||| | || ||||| ||||||||||| | ||| ||||||| || ||||| Sbjct 1063340 ACCTATTCTTTTAGATCATCTCCATATCCTGGACAGGGCTCACTACAACGTGTGATAATA 1063399 Query 1161 TTCGGGGACATGGGGAAGG 1179 || || ||||||||||||| Sbjct 1063400 TTTGGCGACATGGGGAAGG 1063418 Score = 84.2 bits (92), Expect = 5e-14 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1383 AGTGGCAACCACGAGCGGGATTGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCT 1442 ||||| || |||||||| ||||||||| | |||| ||||||||| | || || Sbjct 1017383 AGTGGTAATCACGAGCGTGATTGGCCAAATACTGGCTCCTTCTATAACAAAACGGATTCA 1017442 Query 1443 GGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCT 1502 || || || ||||| || | ||| ||||||||| | ||||||||||||||| ||| Sbjct 1017443 GGTGGAGAATGTGGTGTGCTTGCCAGCACCATGTTTTACGTTCCTGCTGAGAACAGAGCC 1017502 Query 1503 AAGTTCTGGTA 1513 ||| | ||||| Sbjct 1017503 AAGCTTTGGTA 1017513 Score = 84.2 bits (92), Expect = 5e-14 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 1039 ACCTCAAGTACACATACAGGATGGGTCATGAGTTGATGAATGGATCA-ATAGTTTGGAGC 1097 || ||| |||||| || |||||||||||| || |||||| ||| ||| | |||||| Sbjct 1052430 ACTTCAGGTACACTTATAGGATGGGTCATCTCTTATCGAATGGTTCATATA-TCTGGAGC 1052488 Query 1098 AAGAATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATA 1157 || | | |||||| || || ||||| |||||||||||||| ||| || || || Sbjct 1052489 AAATCCTACTCTTTCAGATCATCCCCTTACCCTGGACAAGACTCACCACAGCGTGTTGTA 1052548 Query 1158 ATCTTCGGGGACATGGGGAAGGGAG 1182 || || || ||| | ||||||| || Sbjct 1052549 ATATTTGGAGACCTTGGGAAGGTAG 1052573 Score = 78.8 bits (86), Expect = 2e-12 Identities = 96/131 (73%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1383 AGTGGCAACCACGAGCGGGATTGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCT 1442 ||||| || || || || |||||| | || ||| ||||||| || ||| ||| Sbjct 1027076 AGTGGTAATCATGAACGTACGTGGCCAAATTCAGGAGGCTTCTATCAACATACAGATTCT 1027135 Query 1443 GGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCT 1502 ||||||||||| || || |||| || ||| | || | ||||||||||||||| ||| Sbjct 1027136 GGAGGGGAGTGCGGTGTGACTGCTGAGACCCTTTTCTACGTTCCTGCTGAGAACAGAGCG 1027195 Query 1503 AAGTTCTGGTA 1513 || |||||||| Sbjct 1027196 AACTTCTGGTA 1027206 Score = 68.0 bits (74), Expect = 4e-09 Identities = 81/110 (74%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1404 TGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCTGGAGGGGAGTGTGGGGTTCCT 1463 |||||| | || ||| ||||||| || ||| || ||||||||||| || || || Sbjct 1053096 TGGCCAAATTCAGGAGGCTTCTATCAACATAGAGATTCGGGAGGGGAGTGCGGTGTGACT 1053155 Query 1464 GCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCTAAGTTCTGGTA 1513 || || ||| | || | ||||||||||||| | ||| || |||||||| Sbjct 1053156 GCTGAGACCCTTTTCTACGTTCCTGCTGAGAATAGAGCCAACTTCTGGTA 1053205 Score = 62.6 bits (68), Expect = 2e-07 Identities = 57/72 (79%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 969 CCTGCTCGTACTGTTGGTTGGCGTGATCCAGGTTTCATCCACACTGCTTCATTGAAAGAT 1028 || || || || ||||||||||||||||| ||||||||||| || || || ||||| Sbjct 1002422 CCGGCACGGACAGTTGGTTGGCGTGATCCCGGTTTCATCCATACAAGTTTCTTAAAAGAA 1002481 Query 1029 CTTTGGCCAAAC 1040 | ||||||||| Sbjct 1002482 TTGTGGCCAAAC 1002493 Score = 62.6 bits (68), Expect = 2e-07 Identities = 57/72 (79%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 969 CCTGCTCGTACTGTTGGTTGGCGTGATCCAGGTTTCATCCACACTGCTTCATTGAAAGAT 1028 ||||| | || ||||| ||||||||||| |||||||||||||| || || ||||| Sbjct 1016492 CCTGCGCAGACAGTTGGATGGCGTGATCCTGGTTTCATCCACACGAGTTTCTTAAAAGAA 1016551 Query 1029 CTTTGGCCAAAC 1040 | ||||||||| Sbjct 1016552 TTGTGGCCAAAC 1016563 Score = 62.6 bits (68), Expect = 2e-07 Identities = 99/138 (72%), Gaps = 8/138 (6%) Strand=Plus/Plus Query 832 AGATGACCGTAACATGGACAAGTGGTTACAACATAGGTGAGGCTGTTCCGTTTGTGGAAT 891 ||||||| ||||| ||||| ||||| || | ||| || ||||||||||| |||| Sbjct 1058719 AGATGACTGTAACCTGGACTAGTGGCTATGCGTTGAATGAAGCCGTTCCGTTTGTTGAAT 1058778 Query 892 GGAGTCGTAAGGG---AACTCGAAGTAGACGATCGCCAGCTGGTACCTTGACTTTT-ACC 947 || || ||||| ||| | || | | ||| |||||| || ||||| || | | Sbjct 1058779 GGGGTGTGAAGGGGAAAACCCAAATT---CAATCAGCAGCTGCAACATTGACAATTGATC 1058835 Query 948 AGGAACAGCATGTGTGGT 965 || ||||||||||||||| Sbjct 1058836 AG-AACAGCATGTGTGGT 1058852 Score = 55.4 bits (60), Expect = 3e-05 Identities = 68/93 (73%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 648 TATATGAAGACTGGGAATGCGGTTTTGAAGTTCATGCTTATAAACCAGAGAGCTGATTTC 707 |||| || ||||| | || | |||||||||| | | || || ||||| || |||||| Sbjct 1057927 TATACAAAAACTGGAACAGCTGATTTGAAGTTCCAGTTGATCAATCAGAGGGCAGATTTC 1057986 Query 708 TCCTTTGCCCTCTTCACTGGGGGACTCTCAAAT 740 |||||||| | || |||| || | |||||| Sbjct 1057987 TCCTTTGCATTATTTTCTGGTGGTTTGTCAAAT 1058019 Score = 53.6 bits (58), Expect = 9e-05 Identities = 58/77 (75%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 756 GTTTCAAATCATGTATCGTTTATCAATCCTAAAGCTCCTGTCTATCCACGTCTTGCTTTA 815 ||||||||| || | ||| | ||||||||||| ||| | ||||| || |||||| | Sbjct 1025568 GTTTCAAATTTCATAACATTTGTTAATCCTAAAGCACCTCTATATCCTCGCCTTGCTCAA 1025627 Query 816 GGGAAGAAATGGGACGA 832 |||||| ||||| || Sbjct 1025628 GGGAAGTCTTGGGATGA 1025644 Score = 50.0 bits (54), Expect = 0.001 Identities = 57/77 (74%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 756 GTTTCAAATCATGTATCGTTTATCAATCCTAAAGCTCCTGTCTATCCACGTCTTGCTTTA 815 ||||||||| || | ||| ||||||||||| ||| | ||||| || |||||| | Sbjct 1051570 GTTTCAAATTTCATAACATTTGCTAATCCTAAAGCACCTCTATATCCTCGCCTTGCTCAA 1051629 Query 816 GGGAAGAAATGGGACGA 832 |||||| ||||| || Sbjct 1051630 GGGAAGTCTTGGGATGA 1051646 Score = 44.6 bits (48), Expect = 0.047 Identities = 68/96 (71%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 459 CAGGGTCAGGACACAGAATGGGTAAATGT---TGTTATCTCAAATCCGGAGCCTTCTTCA 515 ||||| |||| | ||||||||| | || |||| | || || || || | | Sbjct 1050777 CAGGGCGAGGATAAAGAATGGGTGACAGTGAATGTTGTG---AACCCAGATCCATTTGAG 1050833 Query 516 GACGATTGGGTTGGAGTCTTCTCACCAGCAAAATTC 551 || |||||||||||||| ||||| || ||||| ||| Sbjct 1050834 GATGATTGGGTTGGAGTTTTCTCGCCTGCAAAGTTC 1050869 Score = 42.8 bits (46), Expect = 0.16 Identities = 55/73 (75%), Gaps = 5/73 (7%) Strand=Plus/Minus Query 2250 ttttttttttCT--TCAAACGTCAAAGATATTGTTAAATATAAACATCAAACAATCTTCA 2307 |||||||||||| | |||| || ||||| ||||||| || || ||| || | | Sbjct 4659205 TTTTTTTTTTCTATTTAAACA-CACGTATATT--TAAATATTAAGATAAAATAAAAATAA 4659149 Query 2308 AAATAAAAATAAA 2320 ||||||||||||| Sbjct 4659148 AAATAAAAATAAA 4659136 Score = 42.8 bits (46), Expect = 0.16 Identities = 35/43 (81%), Gaps = 5/43 (12%) Strand=Plus/Plus Query 2283 AAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTAT 2325 || ||||||||| |||||| ||||||||||||||| ||| Sbjct 33893611 AATTATAAACATGAAACAA-----AAAATAAAAATAAAAATAT 33893648 Score = 41.0 bits (44), Expect = 0.58 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2297 AACAATCTTCAAAATAAAAATAAAA 2321 ||||||||||||||||||| ||||| Sbjct 8117931 AACAATCTTCAAAATAAAATTAAAA 8117955 Score = 41.0 bits (44), Expect = 0.58 Identities = 41/51 (80%), Gaps = 2/51 (4%) Strand=Plus/Plus Query 2272 AAGATATTGTTAAATATAAACATCAAA-CAATCTTCAAAATAAAAATAAAA 2321 |||||||| || ||||| | || || |||| || ||||||||||||||| Sbjct 12449928 AAGATATTTATATATATATATATATAAGCAAT-TTAAAAATAAAAATAAAA 12449977 Score = 41.0 bits (44), Expect = 0.58 Identities = 31/37 (84%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGTACTTGAGAAC 140 ||| ||| ||| |||||| || || |||||||||||| Sbjct 31687781 GAGAGAGAGAGAGAGAGAGAGAGACGTACTTGAGAAC 31687745 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2304 TTCAAAATAAAAATAAAACTATTTCCATCA 2333 ||| ||| ||||||||||| ||||| |||| Sbjct 729533 TTCCAAACAAAAATAAAACAATTTCAATCA 729504 Score = 37.4 bits (40), Expect = 7.0 Identities = 49/68 (72%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 648 TATATGAAGACTGGGAATGCGGTTTTGAAGTTCATGCTTATAAACCAGAGAGCTGATTTC 707 |||| || ||||| || | ||| | || ||| | | || || ||||| || |||||| Sbjct 1051325 TATACAAAAACTGGCAAAACTGTTCTCAAATTCCAGTTGATCAATCAGAGGGCAGATTTC 1051384 Query 708 TCCTTTGC 715 ||||| || Sbjct 1051385 TCCTTCGC 1051392 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2302 TCTTCAAAATAAAAATAAAA 2321 |||||||||||||||||||| Sbjct 2854208 TCTTCAAAATAAAAATAAAA 2854227 Score = 37.4 bits (40), Expect = 7.0 Identities = 39/49 (80%), Gaps = 3/49 (6%) Strand=Plus/Plus Query 2275 ATATTGTTAAATATAAACATCAAACAATCTTCAAAA--TAAAAATAAAA 2321 ||||| |||| ||| || || ||| ||| || |||| ||||||||||| Sbjct 4915700 ATATTTTTAATTATTAA-ATAAAAAAATTTTAAAAAAATAAAAATAAAA 4915747 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2298 ACAATCTTCAAAATAAAAATAAA 2320 |||| |||||||||||||||||| Sbjct 12363097 ACAAACTTCAAAATAAAAATAAA 12363075 Score = 37.4 bits (40), Expect = 7.0 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 2283 AAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 ||||||| | || |||| || ||||| ||||||||||| Sbjct 17641379 AAATATATAGATGAAACGATGACCAAAAAAAAAATAAAAC 17641418 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/29 (90%), Gaps = 2/29 (7%) Strand=Plus/Minus Query 2254 ttttttCTTCAAACGTCAAAGATATTGTT 2282 |||||||| | ||||||||||||||||| Sbjct 21683813 TTTTTTCT--AGACGTCAAAGATATTGTT 21683787 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 219 bits (242), Expect = 1e-54 Identities = 240/317 (76%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 1506 TTCTGGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGAT 1565 ||| ||||||| | |||||||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 10838751 TTCAGGTACTCCACTGATTATGGCATGTTCCGGTTCTGCGTAGCTGACACAGAACATGAC 10838692 Query 1566 TGGAGAGAAGGGTCAGAGCAATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGA 1625 ||| ||||||| ||||||||||| | ||||| |||| || | || ||||| |||||| Sbjct 10838691 TGGCGAGAAGGCACAGAGCAATACAAGTTCATTGAGCACTGCTTGGCATCTGTTGACAGA 10838632 Query 1626 AGGGCTCAGCCTTGGTTGATTTTTATTGCTCATCGTGTTCTCGGTTATTCAACAA--ACG 1683 || || ||| | |||||| |||| ||||| || || ||||||||| || || Sbjct 10838631 CAAAAGCAACCATGGCTAATTTTTCTTGCACATCGAGTACTTGGTTATTCATCATGTACC 10838572 Query 1684 ATTGGTATGGTCAAGAAGGTTCCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCAAAAGC 1743 | | |||| ||||||| || ||||| ||||| ||||| || |||||| | |||| | Sbjct 10838571 AGT--TATGCAGAAGAAGGATCATTTGAGGAACCAATGGGGAGGGAGAGCCTTCAAACTC 10838514 Query 1744 TCTGGCAGAAGTATAAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAA 1803 |||||||||| || || || ||||| || | || || || || || | |||||||| | Sbjct 10838513 TCTGGCAGAAATACAAGGTGGACATTGCTGTGTATGGCCACGTGCACAGTTATGAAAGGA 10838454 Query 1804 CATGCCCCATTTACCAG 1820 |||||||| | |||||| Sbjct 10838453 CATGCCCCGTATACCAG 10838437 Score = 140 bits (154), Expect = 8e-31 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1188 GATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCACTGATCAACTC 1247 |||||||| || || || || ||| |||| ||| ||||| ||||||||| | || Sbjct 10840097 GATGGTTCCAATGAATATAACAATTTCCAGCGTGGCTCTCTTAACACCACTCGAGAGCTT 10840038 Query 1248 ATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCACTTACGCAAAT 1307 || | ||| | ||||||||||| || ||||||||||||||||||| |||||||||| Sbjct 10840037 ATTCAAGACATAAAGAACATTGATATAATTTTCCACATTGGAGATATATGTTACGCAAAT 10839978 Query 1308 GGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTGCTTCTACTGTT 1367 || ||| | || |||||||| || || || || || ||||| | ||||| || || || Sbjct 10839977 GGGTACCTTTCACAGTGGGACCAATTTACTGCACAGGTTGAGGCAATTGCATCAACGGTG 10839918 Query 1368 CCATACATGGTCGCAAG 1384 || |||||| | ||||| Sbjct 10839917 CCTTACATGATTGCAAG 10839901 Score = 96.9 bits (106), Expect = 9e-18 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 1839 GAGAAAAGTCACTACTCAGGAGCCTTCAAAGGAACTATACACGTGGTTGTTGGTGGTGCA 1898 |||||| || |||| || |||| || ||||| |||||||| |||| |||||||| | Sbjct 10837971 GAGAAACGTTACTATAAGGGCACCTTGAATGGAACAATACACGTAGTTGCTGGTGGTGGA 10837912 Query 1899 GGAAGTCACTTGTCTTCGTTCAGCTCGCTGAAACCCAAGTGGAGTATCTTCAGAGACTAT 1958 ||| | | || | || | | | || || |||| |||||| | | ||||||||| Sbjct 10837911 GGAGCAAGCCTTTCACCATTTACCACCCTCCAAACCAAATGGAGTTTATATAGAGACTAT 10837852 Query 1959 GATTACGGGTTTGTGAAGTTGACGGCTTTTGATCACTCCTCTCTTCTCTTCGAATACAAG 2018 || || || || | || | || || ||||| || || ||| | || || |||||| Sbjct 10837851 GACTATGGATTCATAAAACTTACAGCATTTGACCATTCAAATCTGTTGTTTGAGTACAAG 10837792 Query 2019 AAAAGCAGCAATGGAGCTGTACATGACTCCTTCACTATCTTTAGAGAATACAGAGATGTC 2078 || ||||| ||||| || ||||||| |||| || || || ||||| || || Sbjct 10837791 AAGAGCAGGGATGGAAAAGTTTATGACTCTTTCAGAATAACCAGGGATTACAGGGACATC 10837732 Query 2079 TTGGCTTG 2086 ||||| || Sbjct 10837731 TTGGCCTG 10837724 Score = 84.2 bits (92), Expect = 5e-14 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1383 AGTGGCAACCACGAGCGGGATTGGCCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCT 1442 ||||| ||||| ||||| || ||||| | ||||||| |||||||| | |||||| Sbjct 10839813 AGTGGTAACCATGAGCGTGACTGGCCCGGGACTGGATCTTTCTATGGGAACATGGACTCT 10839754 Query 1443 GGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGTTTGATTTTCCTGCTGAGAACAAAGCT 1502 || || || || || || || || || |||||| || | || |||||||| | ||| Sbjct 10839753 GGGGGAGAATGCGGCGTGTTGGCTGAGACTATGTTTTATGTCCCGGCTGAGAATAGGGCT 10839694 Query 1503 AAGTTCTGGTA 1513 ||||||||||| Sbjct 10839693 AAGTTCTGGTA 10839683 Score = 73.4 bits (80), Expect = 1e-10 Identities = 105/147 (71%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 821 GAAATGGGACG-AGATGACCGTAACATGGACAAGTGGTTACAACATAGGTGAGGCTGTTC 879 ||||||| || ||||||| || |||||||||||||| || || ||| || | || Sbjct 10841635 GAAATGGTACTCAGATGACTGTGACATGGACAAGTGGATATGGGATCTATGAAGCAGATC 10841576 Query 880 CGTTTGTGGAATGGAGTCGTAAGGGAACTCGAAGTAGACGATCGCCAGCTGGTACCTTGA 939 | ||||| || ||| |||| || ||| | || | || |||||||| || ||| Sbjct 10841575 CTTTTGTTGAGTGGGGTCGAAAAGGAGGTGACCGTGTGCATTCCCCAGCTGGGACACTGA 10841516 Query 940 CTTTTACCAGGAACAGCATGTGTGGTG 966 ||||| | |||||||||||||||| Sbjct 10841515 CTTTTGATCGTAACAGCATGTGTGGTG 10841489 Score = 71.6 bits (78), Expect = 3e-10 Identities = 103/140 (74%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 1042 TCAAGTACACATACAGGATGGGTCATGAGTTGATGAATGG-ATCAATAGTTTGGAGC-AA 1099 ||| ||| || |||| | |||| ||| || | ||||| | | || ||||||| || Sbjct 10840667 TCAGGTATACTTACAAGCTGGGGCATAGATTATTCAATGGTACCTATT-TTTGGAGTGAA 10840609 Query 1100 GAATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAAT 1159 ||| ||| ||| || | |||||||||||||| ||| | || ||||||| || | || Sbjct 10840608 CAATATCAGTTTAGAG-CTTCTCCTTATCCTGGTCAAAATTCTCTACAACGTGTAGTCAT 10840550 Query 1160 CTTCGGGGACATGGGGAAGG 1179 ||| || ||||||||||||| Sbjct 10840549 CTTTGGCGACATGGGGAAGG 10840530 Score = 46.4 bits (50), Expect = 0.014 Identities = 42/52 (81%), Gaps = 1/52 (2%) Strand=Plus/Minus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || | | ||| | ||||||||||||||| ||||| Sbjct 18632071 TATTTTTAAATAAAAATATAATATAATATA-AAAATAAAAATAAAAATATTT 18632021 Score = 42.8 bits (46), Expect = 0.16 Identities = 35/42 (83%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 2283 AAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||||| |||||||||| || |||||||||||||||| || Sbjct 6610674 AAATAGAAACATCAAAACATA--CAAAATAAAAATAAAAATA 6610635 Score = 41.0 bits (44), Expect = 0.58 Identities = 38/46 (83%), Gaps = 2/46 (4%) Strand=Plus/Plus Query 2281 TTAAATATAAACATC-AAACAATCTTCAAA-ATAAAAATAAAACTA 2324 ||||| |||||| || |||| | || ||| ||||||||||||||| Sbjct 10534232 TTAAAAATAAACGTCTAAACGAAATTAAAATATAAAAATAAAACTA 10534277 Score = 41.0 bits (44), Expect = 0.58 Identities = 30/34 (88%), Gaps = 1/34 (3%) Strand=Plus/Plus Query 3 TTACAA-TTATTTTATTACAAGTaaaaaaaaaaa 35 |||||| ||||||||||| | |||||||||||| Sbjct 37510792 TTACAAATTATTTTATTAATATTAAAAAAAAAAA 37510825 Score = 39.2 bits (42), Expect = 2.0 Identities = 35/43 (81%), Gaps = 1/43 (2%) Strand=Plus/Minus Query 2277 ATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAA 2319 ||| | ||| ||| | |||||| ||| || ||||||||||||| Sbjct 7618467 ATTTTAAAAAATACA-ATCAAAAAATTTTAAAAATAAAAATAA 7618426 Score = 39.2 bits (42), Expect = 2.0 Identities = 35/44 (80%), Gaps = 5/44 (11%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTAT 2325 ||| ||||||||| |||||| ||| ||||||||||| ||| Sbjct 8832956 TAATTATAAACATGAAACAA-----AAATTAAAAATAAAAATAT 8832994 Score = 39.2 bits (42), Expect = 2.0 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 3 TTACAATTATTTTATTACAAGTaaaaaaaaa 33 |||| ||||||||||||||||||| | ||| Sbjct 9246775 TTACTTTTATTTTATTACAAGTAAACATAAA 9246745 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 7 AATTATTTTATTACAAGTaaaaaaaaaaa 35 ||||||||||| | ||| ||||||||||| Sbjct 15785209 AATTATTTTATAAGAAGAAAAAAAAAAAA 15785181 Score = 39.2 bits (42), Expect = 2.0 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 2162 AAAGAAACAGTCCTAGTTTTGATT 2185 |||||||||| ||||||||||||| Sbjct 22628230 AAAGAAACAGACCTAGTTTTGATT 22628207 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/38 (87%), Gaps = 2/38 (5%) Strand=Plus/Plus Query 2299 CAATCTTCAAAATAAAAAT-AAAACTAT-TTCCATCAA 2334 ||| ||||||||||||||| |||| ||| ||| ||||| Sbjct 24793999 CAAACTTCAAAATAAAAATAAAAATTATATTCAATCAA 24794036 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2307 AAAATAAAAATAAAACTATTT 2327 ||||||||||||||||||||| Sbjct 34917469 AAAATAAAAATAAAACTATTT 34917489 Score = 37.4 bits (40), Expect = 7.0 Identities = 30/36 (83%), Gaps = 3/36 (8%) Strand=Plus/Minus Query 4 TACAATTATTTTA---TTACAAGTaaaaaaaaaaaG 36 ||||||||||||| ||||| |||||||||||| Sbjct 8304243 TACAATTATTTTAGATCTACAAAAAAAAAAAAAAAG 8304208 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2197 ATACAATTGTTTCTTGCTCA 2216 |||||||||||||||||||| Sbjct 10648603 ATACAATTGTTTCTTGCTCA 10648584 Score = 37.4 bits (40), Expect = 7.0 Identities = 34/39 (87%), Gaps = 3/39 (8%) Strand=Plus/Minus Query 2283 AAATATAAACATCAAACAATCT-TCAAAATAAAAATAAA 2320 |||||||| | | ||||| ||| |||||||||||||||| Sbjct 19945050 AAATATAATC-TAAAACA-TCTATCAAAATAAAAATAAA 19945014 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1264 ACATTGACATTGTTTTCCACATT 1286 ||||||||||||||| ||||||| Sbjct 29658994 ACATTGACATTGTTTGCCACATT 29658972 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2235 TGATCATCAATGTAGtttttttttt 2259 ||||||||||||||| |||||| || Sbjct 32662206 TGATCATCAATGTAGATTTTTTCTT 32662182 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2271 AAAGATATTGTTAAATATAA 2290 |||||||||||||||||||| Sbjct 37689167 AAAGATATTGTTAAATATAA 37689148 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAA 2290 |||||||||||||||||||| Sbjct 38220911 AAAGATATTGTTAAATATAA 38220930 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 68.0 bits (74), Expect = 4e-09 Identities = 102/140 (73%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 1042 TCAAGTACACATACAGGATGGGTCATGAGTTGATGAATGG-ATCAATAGTTTGGAGC-AA 1099 ||| ||| || |||| | |||| ||| || | ||||| | | || ||||||| || Sbjct 18899162 TCAGGTATACTTACAAGCTGGGGCATAGATTATTCAATGGTACCTATT-TTTGGAGTGAA 18899220 Query 1100 GAATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAAT 1159 ||| ||| ||| || | ||||||| |||||| ||| | || ||||||| || | || Sbjct 18899221 CAATATCAGTTTAGAG-CTTCTCCTTGTCCTGGTCAAAATTCTCTACAACGTGTAGTCAT 18899279 Query 1160 CTTCGGGGACATGGGGAAGG 1179 ||| || ||||||||||||| Sbjct 18899280 CTTTGGTGACATGGGGAAGG 18899299 Score = 39.2 bits (42), Expect = 2.0 Identities = 35/44 (80%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||||| | | |||| |||||| | ||||||||||||||| || Sbjct 7905304 TTAAAAAAATACATTAAACAAAAATAAAAATAAAAATAAAAATA 7905261 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 || ||| |||||| || ||| || | |||||||||||||| Sbjct 12822795 TATATACAAACATTAATAAATATTAATAATAAAAATAAAAC 12822755 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2304 TTCAAAATAAAAATAAAACTATTTCCATCA 2333 ||| ||| ||||||||||| ||||| |||| Sbjct 683228 TTCCAAACAAAAATAAAACAATTTCAATCA 683199 Score = 37.4 bits (40), Expect = 7.0 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 2 ATTACAATTATTTTATTACAAGTaaaaaaaaaa 34 |||| |||||||||||| | ||||||||||| Sbjct 5593937 ATTATTATTATTTTATTAAACTTAAAAAAAAAA 5593969 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 2287 ATAAACATCAAACAATCT-TCAAAATAAAAATAAAACTAT 2325 |||||||| |||||| | ||||||||||||||| ||| Sbjct 23821186 ATAAACATGAAACAAAAAGTAAAAATAAAAATAAAAATAT 23821147 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 9 TTATTTTATTACAAGTaaaaaaaaa 33 ||||||||||| || |||||||||| Sbjct 36900381 TTATTTTATTAAAATTAAAAAAAAA 36900357 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 68.0 bits (74), Expect = 4e-09 Identities = 71/91 (78%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 1090 TTTGGAGC-AAGAATTTCACTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAA 1148 ||||||| || ||| ||| ||| || | |||||| ||||||| ||| | || ||||| Sbjct 33116393 TTTGGAGTGAATAATATCAGTTTAGAG-CTTCTCCTCATCCTGGTCAAAATTCTCTACAA 33116451 Query 1149 CGGGTCATAATCTTCGGGGACATGGGGAAGG 1179 || ||| | ||||| || ||||||||||||| Sbjct 33116452 CGTGTCGTCATCTTTGGTGACATGGGGAAGG 33116482 Score = 41.0 bits (44), Expect = 0.58 Identities = 42/55 (76%), Gaps = 10/55 (18%) Strand=Plus/Plus Query 2275 ATATTGTTAAATATAAACATCAA-ACAAT---------CTTCAAAATAAAAATAA 2319 ||||| | ||||||||| ||||| ||||| ||||||||||||||||| Sbjct 17929777 ATATTATCAAATATAAAAATCAATACAATTTTTATAAACTTCAAAATAAAAATAA 17929831 Score = 39.2 bits (42), Expect = 2.0 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 2289 AAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||| ||| || || ||||||||||||||| ||||| Sbjct 7460552 AAACAATAAATTATTTTAAAAATAAAAATAAAAATATTT 7460514 Score = 39.2 bits (42), Expect = 2.0 Identities = 40/51 (78%), Gaps = 6/51 (12%) Strand=Plus/Minus Query 2277 ATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||| ||||||||| || || || ||||||||||||||| ||||| Sbjct 11890682 ATTGTAAAATATAAA-ATAAATAAA-----AAAATAAAAATAAAAATATTT 11890638 Score = 39.2 bits (42), Expect = 2.0 Identities = 36/44 (82%), Gaps = 4/44 (9%) Strand=Plus/Plus Query 128 TGTACTTGAGAACAAAAACCAAGAGTC-TTCAAAATTCAAAATA 170 ||||||| |||||||||||| || || ||||||||||||| Sbjct 12897736 TGTACTTCTTAACAAAAACCAA---TCATTAAAAATTCAAAATA 12897776 Score = 39.2 bits (42), Expect = 2.0 Identities = 43/54 (80%), Gaps = 4/54 (7%) Strand=Plus/Minus Query 2277 ATTGTTAAATATAAAC--ATCAAA-CAATCTTCAAAATAAAAATAAAACTATTT 2327 ||| |||||| ||||| |||||| ||| | ||||||||||||| | ||||| Sbjct 22147953 ATTATTAAATTTAAACGTATCAAATCAAAAAT-AAAATAAAAATAATATTATTT 22147901 Score = 39.2 bits (42), Expect = 2.0 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 1340 TCAAGTTGAACCTATTGCTTCTACTG 1365 |||||||||||||||| |||||||| Sbjct 32479097 TCAAGTTGAACCTATTTATTCTACTG 32479072 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2304 TTCAAAATAAAAATAAAACTA 2324 ||||||||||||||||||||| Sbjct 34724871 TTCAAAATAAAAATAAAACTA 34724891 Score = 37.4 bits (40), Expect = 7.0 Identities = 34/44 (77%), Gaps = 7/44 (16%) Strand=Plus/Plus Query 2283 AAATATAAACATCAA-------ACAATCTTCAAAATAAAAATAA 2319 ||||| ||| ||||| |||| ||||||||||||||||| Sbjct 14813844 AAATACAAAAATCAATACTTTTACAAACTTCAAAATAAAAATAA 14813887 Score = 37.4 bits (40), Expect = 7.0 Identities = 52/72 (72%), Gaps = 6/72 (8%) Strand=Plus/Minus Query 2250 ttttttttttCTTCAAACGTCAAAGATATTGTTAAATATAAACATCAAACAATCTTCAAA 2309 ||||| |||| || ||| || | |||| | |||| | | |||| ||| | | ||| Sbjct 15485473 TTTTTATTTTTTTTAAATGTTTATGATAAT--TAAAAAAATACATGAAAAA----TAAAA 15485420 Query 2310 ATAAAAATAAAA 2321 |||||||||||| Sbjct 15485419 ATAAAAATAAAA 15485408 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/41 (80%), Gaps = 3/41 (7%) Strand=Plus/Minus Query 13 TTTATTACAAGTaaaaaaaaaaa---GCAGACACAAGTTCT 50 ||||| | ||| |||||| |||| | ||||||||||||| Sbjct 16292131 TTTATAAAAAGAAAAAAAGAAAAAGAGAAGACACAAGTTCT 16292091 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2163 AAGAAACAGTCCTAGTTTTGATT 2185 ||||||||| ||||||||||||| Sbjct 17933893 AAGAAACAGACCTAGTTTTGATT 17933871 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGG 126 |||||||||||||||||| |||| Sbjct 22654719 GAGGGAGGGAGGGAGAGAGAGGG 22654741 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGAT 128 |||||||||||||||||| || ||| Sbjct 29204152 GAGGGAGGGAGGGAGAGAGAGAGAT 29204176 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/42 (79%), Gaps = 6/42 (14%) Strand=Plus/Minus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACT 2323 |||||||||||||||| || |||| ||||| |||||| Sbjct 32239837 TAAATATAAACATCAA------TTTAAAAAAAAAAAAAAACT 32239802 Score = 37.4 bits (40), Expect = 7.0 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 100 CTTCGAGGGAGGGAGGGAGAGAAAGGGATGTAC 132 |||||||||||||| ||| ||| | ||||||| Sbjct 34479723 CTTCGAGGGAGGGATGGATGGAATGAGATGTAC 34479691 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 108 GAGGGAGGGAGAGAAAGGGATGT 130 ||||||||||||||||| ||||| Sbjct 35005779 GAGGGAGGGAGAGAAAGTGATGT 35005757 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 108 GAGGGAGGGAGAGAAAGGGATGT 130 ||||||||| ||||||||||||| Sbjct 35005918 GAGGGAGGGGGAGAAAGGGATGT 35005896 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 2295 CAAACAATCTTC-AAAATAAAAATAAA 2320 |||| ||||||| |||||||||||||| Sbjct 41831531 CAAAAAATCTTCAAAAATAAAAATAAA 41831505 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 46.4 bits (50), Expect = 0.014 Identities = 45/58 (78%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1779 GGTCATGTTCATAACTATGAAAGAACATGCCCCATTTACCAGAACCAATGTATGGACA 1836 || ||||||||||| ||||| ||||| ||| | ||||||| || | || |||| || Sbjct 900834 GGCCATGTTCATAATTATGAGAGAACCTGCTCAGTTTACCAAAATAATTGCATGGCCA 900777 Score = 41.0 bits (44), Expect = 0.58 Identities = 43/53 (81%), Gaps = 3/53 (6%) Strand=Plus/Plus Query 2277 ATTGTTAAATATA-AACATCA-AACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||| ||||||| || || | || ||| || | || |||||||||||||||| Sbjct 2273943 ATTGTAAAATATATAAAATAATAATAATTTTAAGAA-AAAAATAAAACTATTT 2273994 Score = 41.0 bits (44), Expect = 0.58 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2307 AAAATAAAAATAAAACTATTTC 2328 |||||||||||||||||||||| Sbjct 3820113 AAAATAAAAATAAAACTATTTC 3820092 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 6 CAATTATTTTATTACAAGTaaaaaaaaaa 34 ||||||||||| || || ||||||||||| Sbjct 4424588 CAATTATTTTAATAGAAATAAAAAAAAAA 4424616 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2312 AAAAATAAAACTATTTCCATC 2332 ||||||||||||||||||||| Sbjct 17986151 AAAAATAAAACTATTTCCATC 17986171 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 7 AATTATTTTATTACAAGTaaaaaaaaaaa 35 |||| ||||||||||| ||||||||||| Sbjct 21724896 AATTTTTTTATTACAAAAAAAAAAAAAAA 21724924 Score = 39.2 bits (42), Expect = 2.0 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 6 CAATTATTTTATTACAAGTaaaaaaaaaaaG 36 |||||||||||||| || ||||| |||||| Sbjct 23428755 CAATTATTTTATTAAAAAAAAAAAGAAAAAG 23428725 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2300 AATCTTCAAAATAAAAATAAAACTATTT 2327 ||| || ||||||||||||||| ||||| Sbjct 3056049 AATTTTAAAAATAAAAATAAAAATATTT 3056022 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 100 CTTCGAGGGAGGGAGGGAGAGAAAGGGA 127 || |||||||||||||||| || ||||| Sbjct 6520635 CTGCGAGGGAGGGAGGGAGGGAGAGGGA 6520608 Score = 37.4 bits (40), Expect = 7.0 Identities = 32/38 (84%), Gaps = 5/38 (13%) Strand=Plus/Plus Query 3 TTACAATTATTTTATTA--CA---AGTaaaaaaaaaaa 35 ||| ||||||||||||| || |||||||||||||| Sbjct 11448305 TTAAAATTATTTTATTAATCACTGAGTAAAAAAAAAAA 11448342 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/53 (75%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 2275 ATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||| ||||||||| || ||| | | ||||||||||||||| |||| Sbjct 21249817 ATATTAAAAAATATAAAAATAAAAATAAGATAAAAATAAAAATAAAATGATTT 21249765 Score = 37.4 bits (40), Expect = 7.0 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Minus Query 2285 ATATAAACATCAAACAATC--TTCAAAATAAAAATAAAA 2321 || |||| |||| || ||| || ||||||||||||||| Sbjct 25406626 ATGTAAATATCATACCATCGTTTTAAAATAAAAATAAAA 25406588 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 46.4 bits (50), Expect = 0.014 Identities = 58/78 (74%), Gaps = 4/78 (5%) Strand=Plus/Plus Query 2251 tttttttttCTTCAAACGTCAAAGATATTGTTAAATATA---AACATCAAACAATCTTCA 2307 |||| ||||||| || | ||| ||||| | ||||| || || |||||| | | Sbjct 907403 TTTTCTTTTCTTAAATATTAAAAAATATTTCTTAATATTTTGAAAATAAAACAAAAAT-A 907461 Query 2308 AAATAAAAATAAAACTAT 2325 |||||||||||||||||| Sbjct 907462 AAATAAAAATAAAACTAT 907479 Score = 41.0 bits (44), Expect = 0.58 Identities = 41/53 (77%), Gaps = 3/53 (6%) Strand=Plus/Plus Query 2274 GATATTGTTAAATATAAACATCAAAC---AATCTTCAAAATAAAAATAAAACT 2323 || ||||| |||| |||| ||||| || || ||||||||||||||||| Sbjct 1223036 GAGATTGTAAAATTTAAATTTCAAAATTTAAATTTAAAAATAAAAATAAAACT 1223088 Score = 39.2 bits (42), Expect = 2.0 Identities = 56/77 (73%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 2251 tttttttttCTTCAAACGTCAAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAA 2310 ||||| ||| ||||| || || ||||| |||| | | || ||| || | |||| Sbjct 3750832 TTTTTATTTTTTCAATGGTTAAGTATATT--TAAAAA--ATGATTAAAGAAAAATAAAAA 3750777 Query 2311 TAAAAATAAAACTATTT 2327 ||||||||||| ||||| Sbjct 3750776 TAAAAATAAAAATATTT 3750760 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2299 CAATCTTCAAAATAAAAATAA 2319 ||||||||||||||||||||| Sbjct 12038705 CAATCTTCAAAATAAAAATAA 12038725 Score = 39.2 bits (42), Expect = 2.0 Identities = 35/43 (81%), Gaps = 1/43 (2%) Strand=Plus/Plus Query 2223 AACAAACAAATGTGATCATCAATGTAGttttttttttCTTCAA 2265 ||||||||||||| || | | | |||| |||||||| ||||| Sbjct 20875107 AACAAACAAATGTTATTGTTAGTTTAGTGTTTTTTTT-TTCAA 20875148 Score = 39.2 bits (42), Expect = 2.0 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGA 127 ||||||||||||||||||||| || Sbjct 27025891 GAGGGAGGGAGGGAGAGAAAGAGA 27025914 Score = 39.2 bits (42), Expect = 2.0 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 97 CGCC-TTCGAGGGAGGGAGGGAGAGAAAGGGAT 128 |||| || |||||||||||||||||| || ||| Sbjct 27138370 CGCCATTGGAGGGAGGGAGGGAGAGAGAGAGAT 27138338 Score = 39.2 bits (42), Expect = 2.0 Identities = 38/48 (79%), Gaps = 1/48 (2%) Strand=Plus/Minus Query 2243 AATGTAGttttttttttCTTCAAACGTCAAAGATATTGTTAAATATAA 2290 |||| || ||||||||| || || | || |||||||||||||||| Sbjct 29698615 AATG-AGATTTTTTTTTTTTAAATTGAATAAAATATTGTTAAATATAA 29698569 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAA 123 |||||||||||||||||||| Sbjct 38535 GAGGGAGGGAGGGAGAGAAA 38554 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2303 CTTCAAAATAAAAATAAAAC 2322 |||||||||||||||||||| Sbjct 2496666 CTTCAAAATAAAAATAAAAC 2496685 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGG 126 ||||||||||||||| ||||||| Sbjct 8692780 GAGGGAGGGAGGGAGGGAAAGGG 8692758 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 2282 TAAATATAAACATCA-AACAATCTTCAAAATAAAAATAAAACTAT 2325 || ||| ||| |||| |||| |||||||||||| | |||| ||| Sbjct 12957197 TATATAGAAAAATCACAACATACTTCAAAATAAACAAAAAAATAT 12957153 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 3 TTACAATTATTTTATTACAAGTaaaaaaaa 32 || |||||| ||||||||||| |||| ||| Sbjct 16702818 TTGCAATTAATTTATTACAAGAAAAATAAA 16702847 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 2296 AAACAATCTTCAAAATAAAAATAAAACT 2323 ||| ||||| ||||||||||||||||| Sbjct 22413242 AAAAAATCTAAAAAATAAAAATAAAACT 22413215 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGAT 128 |||||||||||||||||| ||| || Sbjct 26472927 GAGGGAGGGAGGGAGAGAGAGGAAT 26472951 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 46.4 bits (50), Expect = 0.014 Identities = 42/52 (81%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || | | ||| | ||||||||||||||| ||||| Sbjct 2377226 TATTTTTAAATAAAAATATAATATAATATA-AAAATAAAAATAAAAATATTT 2377276 Score = 42.8 bits (46), Expect = 0.16 Identities = 43/56 (77%), Gaps = 4/56 (7%) Strand=Plus/Minus Query 2251 tttttttttCTTCAAACGTCAAAGATATTGTTAAATATAAACATCAAACAATCTTC 2306 |||| ||||||||| | ||||||||||||||| | ||| | |||||| ||| Sbjct 2927418 TTTTGTTTTCTTCA----TTAAAGATATTGTTAAAAAAAAAAAAATAACAATTTTC 2927367 Score = 41.0 bits (44), Expect = 0.58 Identities = 29/32 (91%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 8 ATTATTTTATTA-CAAGTaaaaaaaaaaaGCA 38 |||||||||||| ||||||||||||||| || Sbjct 658963 ATTATTTTATTATTAAGTAAAAAAAAAAATCA 658932 Score = 41.0 bits (44), Expect = 0.58 Identities = 38/46 (83%), Gaps = 2/46 (4%) Strand=Plus/Plus Query 2284 AATATAAACATCAAACAATCTTCA-AAATAAAAATAAAACTATTTC 2328 |||||||| || ||| || ||| | |||||||||||||| ||||| Sbjct 15098519 AATATAAA-ATAAAATAAACTTAATAAATAAAAATAAAATAATTTC 15098563 Score = 41.0 bits (44), Expect = 0.58 Identities = 42/55 (76%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 1782 CATGTTCATAACTATGAAAGAACATGCCCCATTTACCAGAACCAATGTATGGACA 1836 ||||||||||| ||||| || || ||| | ||||| | || |||| |||| || Sbjct 24455294 CATGTTCATAATTATGAGAGGACCTGCTCAGTTTACTAAAATAAATGCATGGCCA 24455348 Score = 41.0 bits (44), Expect = 0.58 Identities = 30/34 (88%), Gaps = 2/34 (6%) Strand=Plus/Plus Query 155 TTCAAAATTCAAAATATCATGCGATTGGAAAGTT 188 |||| ||||||||||||||||| ||| |||||| Sbjct 25197160 TTCACAATTCAAAATATCATGCAATT--AAAGTT 25197191 Score = 41.0 bits (44), Expect = 0.58 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 156 TCAAAATTCAAAATATCATGCGATTGG 182 ||| |||||||||||||||| |||||| Sbjct 32166249 TCATAATTCAAAATATCATGAGATTGG 32166275 Score = 39.2 bits (42), Expect = 2.0 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 2304 TTCAAAATAAAAATAAAACTATTTCCATCAA 2334 ||||||||||||||| || | ||||||||| Sbjct 11247567 TTCAAAATAAAAATATAAGTCATTCCATCAA 11247597 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 2297 AACAATCTTCAAAATAAAAATAAAA 2321 || ||||||||||| |||||||||| Sbjct 3334192 AAAAATCTTCAAAAAAAAAATAAAA 3334168 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGTACTTGAGAAC 140 |||||||||||||||||| || || || | ||| ||| Sbjct 6376713 GAGGGAGGGAGGGAGAGAGAGAGA-GTTCGTGAAAAC 6376748 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGTA 131 ||||||||||||||| ||||| | |||| Sbjct 7583898 GAGGGAGGGAGGGAGGGAAAGAGCTGTA 7583871 Score = 37.4 bits (40), Expect = 7.0 Identities = 34/43 (79%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||||| ||| || | | |||| |||||||||||||||||| Sbjct 24307525 TAAATGAAAAAATAATAAAATCAAAAAAATAAAAATAAAACTA 24307567 Score = 37.4 bits (40), Expect = 7.0 Identities = 41/52 (79%), Gaps = 2/52 (4%) Strand=Plus/Minus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || | | ||| | |||||||||||||| ||||| Sbjct 25579663 TATTTTTAAATA-AAATATAATATAATATA-AAAATAAAAATAAATTTATTT 25579614 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/44 (82%), Gaps = 3/44 (7%) Strand=Plus/Plus Query 2281 TTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||||| ||||| | ||||| | || ||||||||||||||| || Sbjct 27885664 TTAAAAATAAAAA--AAACA-TATTAAAAATAAAAATAAAAATA 27885704 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 2282 TAAATATAAACATCA-AACAATCTTCAAAATAAAAATAAAACTAT 2325 || ||| ||| |||| |||| | ||||||||||| | |||| ||| Sbjct 30369400 TATATAGAAAAATCACAACATTATTCAAAATAAATAAAAAATTAT 30369356 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/44 (82%), Gaps = 3/44 (7%) Strand=Plus/Minus Query 2281 TTAAATATAAACATC-AAACAATCTT--CAAAATAAAAATAAAA 2321 ||||||||||| ||| ||||||| || |||| | |||||||| Sbjct 30482864 TTAAATATAAAAATCAAAACAATTTTTACAAATTTCAAATAAAA 30482821 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 44.6 bits (48), Expect = 0.047 Identities = 34/39 (87%), Gaps = 1/39 (3%) Strand=Plus/Plus Query 2275 ATATTGTTAAATATAAACATCAAACAATCTTCAAAATAA 2313 |||| ||||| ||||||| ||||||||||||||| ||| Sbjct 14453683 ATATCTTTAAAAATAAACA-CAAACAATCTTCAAACTAA 14453720 Score = 42.8 bits (46), Expect = 0.16 Identities = 31/36 (86%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 2247 TAGttttttttttCTTCAAACGTCAAAGATATTGTT 2282 || |||||||||||| |||| ||||||||||| || Sbjct 19656892 TAATTTTTTTTTTCTCTAAACATCAAAGATATTATT 19656927 Score = 39.2 bits (42), Expect = 2.0 Identities = 40/52 (77%), Gaps = 3/52 (6%) Strand=Plus/Plus Query 2269 TCAAAGATATTGTTAAATA---TAAACATCAAACAATCTTCAAAATAAAAAT 2317 |||||||| || |||||| ||||||| || ||| | ||||||||||| Sbjct 6739863 TCAAAGATTTTTTTAAATCACTTAAACATTTAAAAATAATAAAAATAAAAAT 6739914 Score = 39.2 bits (42), Expect = 2.0 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 2 ATTACAATTATTTTATTACAAGTaaaaaaaaaa 34 |||| ||||||||||||| | ||||||||||| Sbjct 10806489 ATTA-AATTATTTTATTAAATTTAAAAAAAAAA 10806458 Score = 39.2 bits (42), Expect = 2.0 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGTACTT 134 ||||||||||||||| ||||| |||| |||| Sbjct 16725263 GAGGGAGGGAGGGAGTGAAAGAGATG-ACTT 16725234 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2304 TTCAAAATAAAAATAAAACTATTTCCATCA 2333 ||| ||| ||||||||||| ||||| |||| Sbjct 980850 TTCCAAACAAAAATAAAACAATTTCAATCA 980821 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 689 AAACCAGAGAGCTGATTTCTCCTTT 713 |||||||||||| ||||||| |||| Sbjct 1275773 AAACCAGAGAGCAGATTTCTACTTT 1275749 Score = 37.4 bits (40), Expect = 7.0 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 2296 AAACAATCTTCAAAATAAAAATAAAACTATTTCCATCAAA 2335 ||| || |||| ||||||||||| ||||||| || ||| Sbjct 5606938 AAATAAACTTCTTAATAAAAATAATACTATTTTTATTAAA 5606977 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2300 AATCTTCAAAATAAAAATAAAACTA 2324 || ||||||||||||||||||| || Sbjct 8374610 AAACTTCAAAATAAAAATAAAAGTA 8374634 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 2296 AAACAATCT-TCAAAATAAAAATAAAA 2321 ||| ||||| ||||||||||||||||| Sbjct 11536483 AAATAATCTCTCAAAATAAAAATAAAA 11536509 Score = 37.4 bits (40), Expect = 7.0 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2302 TCTTCAAAATAAAAATAAAA 2321 |||||||||||||||||||| Sbjct 19729848 TCTTCAAAATAAAAATAAAA 19729829 Score = 37.4 bits (40), Expect = 7.0 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 2287 ATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 |||||||||||| ||| || |||| ||| ||| || Sbjct 24532151 ATAAACATCAAATAATATTTAAAAGAAACATATAA 24532185 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/36 (86%), Gaps = 4/36 (11%) Strand=Plus/Minus Query 2284 AATATAAACATCAAACAATCTTCAAAATAAAAATAA 2319 || |||||||||||| ||| |||||||||||||| Sbjct 30064422 AAAATAAACATCAAA---TCT-CAAAATAAAAATAA 30064391 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 2278 TTGTTAAATATAAACATCAAA-CAATCTTCAAAATAAAAATAAAA 2321 || |||||| ||||||||||| ||| | ||| | ||||||||| Sbjct 30549631 TTATTAAATTTAAACATCAAATCAAAAATAAAAGTCAAAATAAAA 30549587 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/39 (85%), Gaps = 3/39 (8%) Strand=Plus/Minus Query 2283 AAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 |||||| | ||| ||| ||||| ||||||||||||||| Sbjct 30582963 AAATATCA-CAT--AACCATCTTAAAAATAAAAATAAAA 30582928 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAAACAATCTTCAAAATAAAAATA 2318 |||||||||| || ||| || | ||||||||||||| Sbjct 34937629 TTAAATATAATGATTAAATCATGTACAAAATAAAAATA 34937592 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAAACAATCTTCAAAATAAAAATA 2318 |||||||||| || ||| || | ||||||||||||| Sbjct 34937919 TTAAATATAATGATTAAATCATGTACAAAATAAAAATA 34937882 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 44.6 bits (48), Expect = 0.047 Identities = 27/29 (93%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 2296 AAACAATCTTCAAAATAAAAATAAAACTA 2324 |||||||||| ||||||||||||||| || Sbjct 11751939 AAACAATCTTAAAAATAAAAATAAAAATA 11751967 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 || ||| |||||| || ||| || | |||||||||||||| Sbjct 755735 TATATACAAACATTAATAAATATTAATAATAAAAATAAAAC 755695 Score = 37.4 bits (40), Expect = 7.0 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Plus Query 2300 AATCTTCAAAATAAAAATAAAACTA 2324 |||||| |||||||||||||||||| Sbjct 15462221 AATCTT-AAAATAAAAATAAAACTA 15462244 Score = 37.4 bits (40), Expect = 7.0 Identities = 38/48 (79%), Gaps = 4/48 (8%) Strand=Plus/Minus Query 10 TATTTTATTACA---AGTaaaaaaaaaaaGCAG-ACACAAGTTCTCTA 53 |||||||||||| | |||||||||||| || |||| | |||| || Sbjct 20986676 TATTTTATTACAATTATTAAAAAAAAAAAAAAGAACACTATTTCTATA 20986629 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 44.6 bits (48), Expect = 0.047 Identities = 30/34 (88%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 2293 ATCAAACAATCTTCAAAATAAAAATAAAACTATT 2326 |||||| |||| | ||||||||||||||||||| Sbjct 518069 ATCAAAGAATCATATAAATAAAAATAAAACTATT 518102 Score = 41.0 bits (44), Expect = 0.58 Identities = 28/32 (88%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 2294 TCAAACAATCTTCAAAATAAAAATAAAACTAT 2325 ||||| |||| | |||||||||||||||||| Sbjct 535168 TCAAAGAATCATAGAAATAAAAATAAAACTAT 535199 Score = 41.0 bits (44), Expect = 0.58 Identities = 44/56 (79%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATA-AAAATAAAACTAT 2325 ||||||||| || |||| | | ||| ||| | || ||||| ||||||||||||| Sbjct 14058524 AAAGATATTTTTTAATAGAGA-ATCCAACTCTATTTCAAATAGAAAATAAAACTAT 14058578 Score = 41.0 bits (44), Expect = 0.58 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGT 130 |||||||||||||||||| || ||||| Sbjct 25413508 GAGGGAGGGAGGGAGAGACAGAGATGT 25413534 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 2298 ACAATCTTCAAAATAAAAATA-AAACTA 2324 |||| |||||||||||||||| |||||| Sbjct 4030155 ACAAACTTCAAAATAAAAATAGAAACTA 4030182 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Minus Query 2305 TCAAAATAAAAATAAAACTATTTCCATC 2332 |||||| ||||| ||||||||||||||| Sbjct 4501564 TCAAAAAAAAAA-AAAACTATTTCCATC 4501538 Score = 39.2 bits (42), Expect = 2.0 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 2307 AAAATAAAAATAAAACTATTTCCATC 2332 |||| ||||| ||||||||||||||| Sbjct 13404764 AAAAAAAAAAAAAAACTATTTCCATC 13404739 Score = 39.2 bits (42), Expect = 2.0 Identities = 38/48 (79%), Gaps = 1/48 (2%) Strand=Plus/Minus Query 2277 ATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||| || ||||| | ||||| | ||| | ||||||||||||||| || Sbjct 27697997 ATTATTTAATATTA-CATCATAAAATAATAAAAATAAAAATAAAAATA 27697951 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/51 (78%), Gaps = 3/51 (6%) Strand=Plus/Plus Query 2279 TGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATA--AAACTATTT 2327 ||||||| ||| || | ||| || | ||||||||||||| ||| ||||| Sbjct 1933887 TGTTAAAAATATACTTAAAATAAAAT-CAAAATAAAAATAACAAAATATTT 1933936 Score = 37.4 bits (40), Expect = 7.0 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 100 CTTCGAGGGAGGGAGGGAGAGAAAGGGATGTAC 132 |||||||||||||| ||| ||| | ||||||| Sbjct 2876371 CTTCGAGGGAGGGATGGATGGAACGAGATGTAC 2876403 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2163 AAGAAACAGTCCTAGTTTTGATT 2185 ||||||||| ||||||||||||| Sbjct 3417119 AAGAAACAGACCTAGTTTTGATT 3417097 Score = 37.4 bits (40), Expect = 7.0 Identities = 32/40 (80%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 |||| ||||| | ||| ||| | ||||||||||||||| Sbjct 6981587 TAAAAATAAAATTTAAAAAATAATAAAAATAAAAATAAAA 6981626 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 2289 AAACATCAAACAATCTTCAAAATAAAA 2315 |||||||||| | |||||||||||||| Sbjct 11994861 AAACATCAAATA-TCTTCAAAATAAAA 11994836 Score = 37.4 bits (40), Expect = 7.0 Identities = 41/54 (76%), Gaps = 2/54 (4%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCT--TCAAAATAAAAATAAAAC 2322 ||||| || |||||| ||| ||||||||| | | |||||||||||||| Sbjct 13718495 AAAGAAGTTAATAAATAAAAAGATCAAACAAAACAATAATAATAAAAATAAAAC 13718548 Score = 37.4 bits (40), Expect = 7.0 Identities = 41/55 (75%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 1782 CATGTTCATAACTATGAAAGAACATGCCCCATTTACCAGAACCAATGTATGGACA 1836 ||||||||||| ||||| || || ||| | | ||| | || |||| |||| || Sbjct 18046634 CATGTTCATAATTATGAGAGGACCTGCTCAGTATACTAAAATAAATGCATGGTCA 18046580 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 103 CGAGGGAGGGAGGGAGAGAAAGGGA 127 ||||||||||||||||||| || || Sbjct 19756572 CGAGGGAGGGAGGGAGAGAGAGAGA 19756596 Score = 37.4 bits (40), Expect = 7.0 Identities = 39/52 (75%), Gaps = 6/52 (12%) Strand=Plus/Minus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || | | || |||||||||||||| ||||| Sbjct 26756435 TATTTTTAAATAAAAATATAATATAA------AAATAAAAATAAAATTATTT 26756390 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGGAT 128 |||||||||||||||||| || ||| Sbjct 27040063 GAGGGAGGGAGGGAGAGAGAGAGAT 27040039 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 44.6 bits (48), Expect = 0.047 Identities = 33/39 (85%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 2283 AAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 ||||||||| | ||| ||| || ||||||||||||||| Sbjct 14161710 AAATATAAAACTTAAAAAATTTTAAAAATAAAAATAAAA 14161672 Score = 42.8 bits (46), Expect = 0.16 Identities = 40/51 (78%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 ||||||| | |||| ||||| || ||| || | ||||||||||||||| Sbjct 10608856 AAAGATAAAGATAAAAATAAAAATAAAATAAAAATAAAAATAAAAATAAAA 10608806 Score = 41.0 bits (44), Expect = 0.58 Identities = 42/53 (79%), Gaps = 3/53 (6%) Strand=Plus/Plus Query 2278 TTGTTAAATATAAAC--ATCAAA-CAATCTTCAAAATAAAAATAAAACTATTT 2327 || |||||| ||||| |||||| ||| | ||||||||||||| | ||||| Sbjct 2433493 TTATTAAATTTAAACCCATCAAATCAAAAATAAAAATAAAAATAATATTATTT 2433545 Score = 41.0 bits (44), Expect = 0.58 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 102 TCGAGGGAGGGAGGGAGAGAAAGGG 126 |||||||||||||||||||| |||| Sbjct 31446357 TCGAGGGAGGGAGGGAGAGAGAGGG 31446381 Score = 39.2 bits (42), Expect = 2.0 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1257 TTGAAGAACATTGACATTGTTTTCCA 1282 ||||||||||||||| ||||| |||| Sbjct 8417684 TTGAAGAACATTGACTTTGTTGTCCA 8417709 Score = 39.2 bits (42), Expect = 2.0 Identities = 38/46 (83%), Gaps = 5/46 (11%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAA-ACAATCTTCAAA-AT---AAAAATAAAA 2321 ||||||||||| ||||| |||||||| ||| || ||||| |||| Sbjct 8505040 TTAAATATAAAAATCAATACAATCTTTAAAGATCTCAAAAAAAAAA 8504995 Score = 39.2 bits (42), Expect = 2.0 Identities = 31/35 (89%), Gaps = 2/35 (6%) Strand=Plus/Minus Query 424 CTTTTATTCACGTTTCCCCTCTTGTTCTTGGTTCC 458 ||||||| ||| ||||||||||||||||| |||| Sbjct 18622613 CTTTTAT-CAC-TTTCCCCTCTTGTTCTTTCTTCC 18622581 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAG 124 ||||||||||||||||||||| Sbjct 22323404 GAGGGAGGGAGGGAGAGAAAG 22323384 Score = 39.2 bits (42), Expect = 2.0 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 2162 AAAGAAACAGTCCTAGTTTTGATT 2185 |||||||||| ||||||||||||| Sbjct 27817792 AAAGAAACAGACCTAGTTTTGATT 27817769 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAG 124 ||||||||||||||||||||| Sbjct 45164183 GAGGGAGGGAGGGAGAGAAAG 45164163 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 2282 TAAATATAAACATCA-AACAATCTTCAAAATAAAAATAAAACTAT 2325 || ||| ||| |||| |||| | ||||||||||| | |||| ||| Sbjct 9935822 TATATAGAAAAATCACAACATTATTCAAAATAAATAAAAAAATAT 9935866 Score = 37.4 bits (40), Expect = 7.0 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 2283 AAATATAAACATCAA-ACAATCTTCAAAATAAAAA 2316 ||||||||| || || |||| ||||||||||||| Sbjct 11516425 AAATATAAAAATTAATACAACTTTCAAAATAAAAA 11516459 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2307 AAAATAAAAATAAAACTATTTCCAT 2331 |||||||||||||||||| || ||| Sbjct 22802279 AAAATAAAAATAAAACTAGTTTCAT 22802303 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2163 AAGAAACAGTCCTAGTTTTGATT 2185 ||||||||| ||||||||||||| Sbjct 35428271 AAGAAACAGACCTAGTTTTGATT 35428249 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 128 TGTACTTGAGAACAAAAACCAAG 150 ||||||||||| ||||||||||| Sbjct 43848124 TGTACTTGAGAGCAAAAACCAAG 43848102 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 42.8 bits (46), Expect = 0.16 Identities = 46/60 (77%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 2272 AAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAA-AATAAAACTATTTCCA 2330 ||| ||| ||||||||||||||| | || | |||||||| |||||| || ||||| Sbjct 8114826 AAGTTATCTTTAAATATAAACATCTTAAAAGTTAAAAAATAAATTATAAAAATAATTCCA 8114767 Score = 41.0 bits (44), Expect = 0.58 Identities = 43/57 (75%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||| ||| |||| || || ||| || | || || ||| |||||||||||||||| Sbjct 10015155 AAATATAATGTTCGATGTATACAACATAAAAAATTGAAATAAAAAATAAAACTATTT 10015211 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/52 (77%), Gaps = 6/52 (12%) Strand=Plus/Minus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || ||||| |||||||||||||| ||||| Sbjct 1171635 TATTTTTAAATAAAAATAT-----AATCTA-AAAATAAAAATAAATTTATTT 1171590 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 89 TTCTGAAACGCCTTCGAGGGAGGGAGGGAG 118 ||||||||| | | ||||||||||||||| Sbjct 3632042 TTCTGAAACACAATGGAGGGAGGGAGGGAG 3632071 Score = 37.4 bits (40), Expect = 7.0 Identities = 35/42 (83%), Gaps = 2/42 (5%) Strand=Plus/Minus Query 2282 TAAATATAAACAT-CAAACAATCTT-CAAAATAAAAATAAAA 2321 || ||||| |||| |||| || || |||||||||||||||| Sbjct 3672119 TATATATACACATGCAAAATATATTTCAAAATAAAAATAAAA 3672078 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGG 126 |||||||||||||||||| |||| Sbjct 10722337 GAGGGAGGGAGGGAGAGAGAGGG 10722359 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/41 (80%), Gaps = 3/41 (7%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 ||||| |||| | ||| ||| || ||||||||||||||| Sbjct 24209668 TTAAAAATAA---TTAAAGAATTTTGAAAATAAAAATAAAA 24209631 Score = 37.4 bits (40), Expect = 7.0 Identities = 39/48 (81%), Gaps = 4/48 (8%) Strand=Plus/Minus Query 2278 TTGTTAAATATAAACAT--CAAACAATCTTCAAAATAAAAATAAAACT 2323 || ||| |||||| ||| |||| ||| || ||||||||||| ||||| Sbjct 24827970 TTTTTATATATAA-CATTACAAATAATATT-AAAATAAAAATGAAACT 24827925 Score = 37.4 bits (40), Expect = 7.0 Identities = 37/46 (80%), Gaps = 3/46 (7%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||||| || | ||| ||| || |||||||||||||| ||||| Sbjct 26560438 TAAATATTAATA--AAATAAT-TTGTAAATAAAAATAAAATTATTT 26560480 Score = 37.4 bits (40), Expect = 7.0 Identities = 37/46 (80%), Gaps = 3/46 (7%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 ||||||| || | ||| ||| || |||||||||||||| ||||| Sbjct 26764173 TAAATATTAATA--AAATAAT-TTGTAAATAAAAATAAAATTATTT 26764215 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 689 AAACCAGAGAGCTGATTTCTCCTTT 713 |||||||||||| ||||||| |||| Sbjct 27187982 AAACCAGAGAGCAGATTTCTACTTT 27187958 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 41.0 bits (44), Expect = 0.58 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 428 TATTCACGTTTCCCCTCTTGTTCTTGG 454 ||| |||||||||| |||||||||||| Sbjct 10944995 TATCCACGTTTCCCTTCTTGTTCTTGG 10944969 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 106 GGGAGGGAGGGAGAGAAAGGG 126 ||||||||||||||||||||| Sbjct 472944 GGGAGGGAGGGAGAGAAAGGG 472924 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 2275 ATATTGTTAAATATAAACATCA-AACAATCTTCAAAATAA 2313 ||||| ||||||||||| || | || ||| || ||||||| Sbjct 1995336 ATATTTTTAAATATAAAAATAATAATAATATTAAAAATAA 1995297 Score = 37.4 bits (40), Expect = 7.0 Identities = 24/25 (96%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 2300 AATCTTCAAAATAAAAATAAAACTA 2324 ||||| ||||||||||||||||||| Sbjct 15836298 AATCT-CAAAATAAAAATAAAACTA 15836275 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1247 CATCAAGGACTTGAAGAACATTG 1269 ||||||||||||||||| ||||| Sbjct 16197714 CATCAAGGACTTGAAGACCATTG 16197692 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 41.0 bits (44), Expect = 0.58 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Plus Query 2275 ATATTGTTAAATATAAACATCAAACAATCTTCAAAATAA 2313 |||| ||||| ||||| || ||| |||||||||||||| Sbjct 15706922 ATATCTTTAAAAATAAAAATAAAA-AATCTTCAAAATAA 15706959 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 || ||| |||||| || ||| || | |||||||||||||| Sbjct 16612590 TATATACAAACATTAATAAATATTAATAATAAAAATAAAAC 16612550 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 || ||| |||||| || ||| || | |||||||||||||| Sbjct 16622625 TATATACAAACATTAATAAATATTAATAATAAAAATAAAAC 16622585 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 3 TTACAATTATTTTATTACAAGTaaaaaaaa 32 || |||||| ||||||||||| |||| ||| Sbjct 2689469 TTGCAATTAATTTATTACAAGAAAAATAAA 2689498 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 183 AAAGTTTTAATCTTTGAAAGGTCAAAAG 210 |||||||||| || | |||||||||||| Sbjct 3988197 AAAGTTTTAACCTCTAAAAGGTCAAAAG 3988224 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 2281 TTAAATATAAACATCAA-ACAATCTTCAAAATAAAAA 2316 ||||||||||| ||||| | || || |||||||||| Sbjct 4703433 TTAAATATAAAAATCAATATAAATTTTAAAATAAAAA 4703397 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 104 GAGGGAGGGAGGGAGAGAAAGGG 126 |||||||||||||||||| |||| Sbjct 6109553 GAGGGAGGGAGGGAGAGAGAGGG 6109531 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 25 aaaaaaaaaaaGCAGACACAAGTTCTCTAT 54 ||||||||||| ||||||||||| |||| Sbjct 9210722 AAAAAAAAAAAAAAGACACAAGTTGCCTAT 9210751 Score = 37.4 bits (40), Expect = 7.0 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Plus Query 2281 TTAAATATAAACATCAA-ACAATCTTCAAAATAAAAATAA 2319 ||||| ||||| || || |||| || ||||||||||||| Sbjct 10410042 TTAAACATAAAAATTAATACAAATTTTAAAATAAAAATAA 10410081 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 73 aaaaaGAAAATTTCTGTTCTGAAAC 97 ||||| ||||||| ||||||||||| Sbjct 14838014 AAAAAAAAAATTTATGTTCTGAAAC 14838038 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 2282 TAAATATAAACATCA-AACAATCTTCAAAATAAAAATAAAACTAT 2325 || ||| ||| || | |||| ||||||||||||| | |||| ||| Sbjct 17229081 TATATAGAAAAATAACAACATTCTTCAAAATAAATAAAAAAATAT 17229037 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2312 AAAAATAAAACTATTTCCATCAA 2334 |||||| |||||||||||||||| Sbjct 20190062 AAAAATGAAACTATTTCCATCAA 20190040 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 41.0 bits (44), Expect = 0.58 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 148 AAGAGTCTTCAAAATTCAAAATATCAT 174 ||||| |||||||| |||||||||||| Sbjct 15679445 AAGAGACTTCAAAAGTCAAAATATCAT 15679471 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 1758 AAAGTAGACATCGCGTTCTACGGTCATGTTCATAACTATGA 1798 ||||| ||||| | ||| ||||||||||||| |||||| Sbjct 7758106 AAAGTTGACATTGTGTTAGCCGGTCATGTTCATGCCTATGA 7758146 Score = 39.2 bits (42), Expect = 2.0 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 7 AATTATTTTATTACAAGTaaaaaaaaaaa 35 ||||||||||||| | |||||||||||| Sbjct 23592231 AATTATTTTATTATTATTAAAAAAAAAAA 23592259 Score = 37.4 bits (40), Expect = 7.0 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 2283 AAATATAAACATCAA-ACAATCTTCAAAATAAAAATA 2318 ||||| ||| | ||| ||||| |||||||||||| || Sbjct 6707627 AAATACAAAAAACAATACAATTTTCAAAATAAAATTA 6707663 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/52 (77%), Gaps = 2/52 (4%) Strand=Plus/Minus Query 2273 AGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTA 2324 ||| || || ||||| |||| |||| || | ||||||||||||||| || Sbjct 11114608 AGAAATAGTGAAATACAAACTACAAAAAAA--TAAAAATAAAAATAAAAATA 11114559 Score = 37.4 bits (40), Expect = 7.0 Identities = 52/72 (72%), Gaps = 6/72 (8%) Strand=Plus/Plus Query 2250 ttttttttttCTTCAAACGTCAAAGATATTGTTAAATATAAACATCAAACAATCTTCAAA 2309 || ||||||| || || | ||| ||||| ||||||||| | ||| || ||| Sbjct 15481574 TTATTTTTTTTTTAAATATTTAAATATATTAAAAAATATAAAAAATAAA--AT----AAA 15481627 Query 2310 ATAAAAATAAAA 2321 |||||||||||| Sbjct 15481628 ATAAAAATAAAA 15481639 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 11 ATTTTATTACAAGTaaaaaaaaaaa 35 |||||||||||| ||||||||||| Sbjct 20225688 ATTTTATTACAAAAAAAAAAAAAAA 20225664 Score = 37.4 bits (40), Expect = 7.0 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 7 AATTATTTTATTA-CAAGTaaaaaaaaaaa 35 ||||||||||||| ||| ||||||||||| Sbjct 21272809 AATTATTTTATTATCAAAAAAAAAAAAAAA 21272780 Score = 37.4 bits (40), Expect = 7.0 Identities = 37/50 (74%), Gaps = 10/50 (20%) Strand=Plus/Minus Query 2280 GTTAAATATAAACATCAA----------ACAATCTTCAAAATAAAAATAA 2319 |||||| ||||| ||||| |||| ||||||||||||||||| Sbjct 23311687 GTTAAACATAAAAATCAATATAATTTTTACAAACTTCAAAATAAAAATAA 23311638 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 143 AAACCAAGAGTCTTCAAAATTCAAAATA 170 |||||| ||||| | ||||||||||||| Sbjct 25240859 AAACCATGAGTCATAAAAATTCAAAATA 25240832 Score = 37.4 bits (40), Expect = 7.0 Identities = 39/52 (75%), Gaps = 6/52 (12%) Strand=Plus/Plus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || | | || |||||||||||||| ||||| Sbjct 25981180 TATTTTTAAATAAAAATATAATATAA------AAATAAAAATAAAAATATTT 25981225 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 2300 AATCTTCAAAATAAAAATAAAACTATT 2326 |||||| |||||| ||||||||||||| Sbjct 26449653 AATCTT-AAAATATAAATAAAACTATT 26449628 Score = 37.4 bits (40), Expect = 7.0 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1565 TTGGAGAGAAGGGTCAGAGCAAT 1587 |||||||| |||||||||||||| Sbjct 28612031 TTGGAGAGGAGGGTCAGAGCAAT 28612009 Score = 37.4 bits (40), Expect = 7.0 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 2304 TTCAAAATAAAAATAAAACTATTTCCATCA 2333 ||| ||| ||||||||||| ||||| |||| Sbjct 30232598 TTCCAAACAAAAATAAAACAATTTCAATCA 30232569 Score = 37.4 bits (40), Expect = 7.0 Identities = 36/44 (82%), Gaps = 3/44 (7%) Strand=Plus/Plus Query 2281 TTAAATATAAACATCAAACAATCTT--CAAA-ATAAAAATAAAA 2321 ||||||||||| ||||| |||| || |||| | ||||||||| Sbjct 30992792 TTAAATATAAAAATCAATCAATTTTTACAAACTTTAAAATAAAA 30992835 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/53 (75%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACT 2323 ||||| | | | ||||||||||| | |||| | | |||| |||||||| || Sbjct 33589189 AAAGACAATCTCAAATATAAACAGGAGACAAAGTGCCAAATTAAAATAAAGCT 33589241 Score = 37.4 bits (40), Expect = 7.0 Identities = 40/51 (78%), Gaps = 3/51 (6%) Strand=Plus/Plus Query 2271 AAAGATATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 || ||||| | || | ||||| | || |||| || ||||||||||||||| Sbjct 35493321 AATGATATCGCTACAAATAAAGA--AATCAAT-TTAAAAATAAAAATAAAA 35493368 >Query1 on lcl|JrScfU0025| Query1 on lcl|JrScfU0025 Length=38493 Score = 39.2 bits (42), Expect = 2.0 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAGGGATGTACTT 134 ||||||||||||||| ||||| |||| |||| Sbjct 33830 GAGGGAGGGAGGGAGTGAAAGAGATG-ACTT 33859 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 39.2 bits (42), Expect = 2.0 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAAC 2322 || ||| |||||| || ||| || | |||||||||||||| Sbjct 9903383 TATATACAAACATTAATAAATATTAATAATAAAAATAAAAC 9903423 Score = 39.2 bits (42), Expect = 2.0 Identities = 25/26 (96%), Gaps = 1/26 (4%) Strand=Plus/Plus Query 2290 AACATCAAACAATCTTCAAAATAAAA 2315 ||||||||||| |||||||||||||| Sbjct 14214746 AACATCAAACA-TCTTCAAAATAAAA 14214770 Score = 39.2 bits (42), Expect = 2.0 Identities = 42/56 (75%), Gaps = 5/56 (9%) Strand=Plus/Minus Query 2277 ATTGTTAAATATAAACATCAAACAATCTTCA-----AAATAAAAATAAAACTATTT 2327 ||||| ||||||| ||| || ||| || | |||||||||||||| ||||| Sbjct 14703295 ATTGTAAAATATATACAAATAATAATTTTAAGAAAAAAATAAAAATAAAAATATTT 14703240 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2299 CAATCTTCAAAATAAAAATAA 2319 ||||||||||||||||||||| Sbjct 22120038 CAATCTTCAAAATAAAAATAA 22120018 Score = 39.2 bits (42), Expect = 2.0 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 104 GAGGGAGGGAGGGAGAGAAAG 124 ||||||||||||||||||||| Sbjct 22248362 GAGGGAGGGAGGGAGAGAAAG 22248382 Score = 39.2 bits (42), Expect = 2.0 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1812 ATTTACCAGAACCAATGTATGGACAA 1837 |||| ||||| ||||||||||||||| Sbjct 27502501 ATTTTCCAGATCCAATGTATGGACAA 27502526 Score = 39.2 bits (42), Expect = 2.0 Identities = 35/43 (81%), Gaps = 2/43 (5%) Strand=Plus/Minus Query 2293 ATCAAACAATCTTCAAAATAAAAATAAAACTATTTCCATCAAA 2335 || ||||||||| ||| ||||||||||| ||||| || ||| Sbjct 28058343 ATAAAACAATCT--AAATTAAAAATAAAATTATTTTTATAAAA 28058303 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 8 ATTATTTTATTACAAGTaaaaaaaaaaa 35 || |||||||||||| ||||||||||| Sbjct 6223502 ATAATTTTATTACAAAAAAAAAAAAAAA 6223475 Score = 37.4 bits (40), Expect = 7.0 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 2282 TAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACT 2323 |||||||||| ||| | || | ||||||||||||||||| Sbjct 18080712 TAAATATAAA-ATCTTAAAACTTAAAAAATAAAAATAAAACT 18080752 Score = 37.4 bits (40), Expect = 7.0 Identities = 39/52 (75%), Gaps = 6/52 (12%) Strand=Plus/Minus Query 2276 TATTGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAACTATTT 2327 |||| ||||||| ||| || ||| || ||||||||||||| ||||| Sbjct 18467011 TATTTTTAAATAAAAATATAAAATAA------AAATAAAAATAAATTTATTT 18466966 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 2303 CTTCAAAATAAAAATAAAACTATTT 2327 |||||||||||||||| || ||||| Sbjct 19852656 CTTCAAAATAAAAATATAATTATTT 19852680 Score = 37.4 bits (40), Expect = 7.0 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 103 CGAGGGAGGGAGGGAGAGAAAGGGA 127 ||||||||||||||||||| || || Sbjct 20253739 CGAGGGAGGGAGGGAGAGAGAGAGA 20253715 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 2307 AAAATAAAAATAAAACTATTTCCATCAA 2334 |||||||||||||||||| | || |||| Sbjct 20525843 AAAATAAAAATAAAACTAATGCCCTCAA 20525870 Score = 37.4 bits (40), Expect = 7.0 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 2291 ACATCAAACAATCT-TCAAAATAAAAATAAAA 2321 ||||||||| || | | ||||||||||||||| Sbjct 23154406 ACATCAAACGATTTATAAAAATAAAAATAAAA 23154437 Score = 37.4 bits (40), Expect = 7.0 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 8 ATTATTTTATTACAAGTaaaaaaaaaaa 35 |||||||||||| || || ||||||||| Sbjct 23699203 ATTATTTTATTAAAATTACAAAAAAAAA 23699230 Score = 37.4 bits (40), Expect = 7.0 Identities = 34/43 (79%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 2279 TGTTAAATATAAACATCAAACAATCTTCAAAATAAAAATAAAA 2321 ||||||| | |||| | ||| ||| ||||||||||||||| Sbjct 27319565 TGTTAAAAAAAAACTTAAAAAAATTAAAAAAATAAAAATAAAA 27319523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1231344072679 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2