BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=1253 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr8S 102 1e-19 lcl|Jr3S 93.3 6e-17 lcl|Jr8D 80.6 3e-13 lcl|Jr4D 42.8 0.087 lcl|Jr6S 41.0 0.31 lcl|Jr6D 41.0 0.31 lcl|Jr4S 41.0 0.31 lcl|Jr2D 41.0 0.31 lcl|Jr7S 39.2 1.1 lcl|Jr7D 39.2 1.1 lcl|Jr5D 39.2 1.1 lcl|Jr1S 39.2 1.1 lcl|Jr1D 39.2 1.1 lcl|Jr5S 37.4 3.7 lcl|Jr3D 37.4 3.7 lcl|Jr2S 37.4 3.7 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 102 bits (112), Expect = 1e-19 Identities = 114/151 (75%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 282 TCTT-CAGATGGGAGAAATCGGAGAGAAATTAGATATCGATTTTGTGATTTCTACTGGAG 340 |||| ||||||||| || |||||||| ||||| ||| ||||||| ||||||| |||| Sbjct 16881246 TCTTGCAGATGGGAAGGATTGGAGAGAAGTTAGACATCAATTTTGTTGTTTCTACAGGAG 16881187 Query 341 ATAATTTTTACGACAATGGTTTAACCAGCTTGCACGATCCTCTATTTCAAGATTCTTTTA 400 ||||||| ||||||||||| || | || |||| || | |||| || || |||| Sbjct 16881186 ATAATTTCTACGACAATGGATTGTCTAGTGTGCAGGACACCGCATTTGTGGAGTCGTTTA 16881127 Query 401 CCAACATTTATACCGCTCCGAGCTTGCAGAA 431 |||| || || || || |||| ||||||| Sbjct 16881126 CCAAAATCTACACAGCCAAGAGCCTGCAGAA 16881096 Score = 71.6 bits (78), Expect = 2e-10 Identities = 81/109 (74%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 445 GTTTTAGGAAATCATGATTATAGAGGTGACGTCAGGGCACAACTTAGCCCTATGCTCAGA 504 ||||| || || |||||||||||||| | || |||||| | |||||| | ||||| Sbjct 16880973 GTTTTGGGCAACCATGATTATAGAGGCAATGTAGAGGCACAGTTGAGCCCTCTCCTCAGG 16880914 Query 505 GCTCTGGACAACAGATGGGTTTGCATGAGATCTTTCATTGTAAATGCTG 553 | || | ||||||| |||| |||||||||| ||||| ||| ||| Sbjct 16880913 AAAATTGATAGCAGATGGATTTGTCTGAGATCTTTTATTGTGAATTCTG 16880865 Score = 59.0 bits (64), Expect = 1e-06 Identities = 80/109 (73%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 445 GTTTTAGGAAATCATGATTATAGAGGTGACGTCAG-GGCACAACTTAGCCCTATGCTCAG 503 ||||| || || ||||||||||| || | ||| |||||| | |||||| | ||||| Sbjct 16090346 GTTTTGGGCAACCATGATTATAG-GGGCAGTGCAGAAGCACAATTGAGCCCTCTCCTCAG 16090404 Query 504 AGCTCTGGACAACAGATGGGTTTGCATGAGATCTTTCATTGTAAATGCT 552 | | || | |||||| | ||| |||||||||| ||||| ||| || Sbjct 16090405 AAAAATTGATAGTAGATGGCTCTGCCTGAGATCTTTTATTGTGAATTCT 16090453 Score = 48.2 bits (52), Expect = 0.002 Identities = 38/46 (83%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 212 ATGGTACAGTGAGCTTTCTCGTTATCGGAGACTGGGGAAGAAGAGG 257 |||| | || |||||| | ||||| || ||||||||||||||||| Sbjct 16881465 ATGGGTCGGTTAGCTTTTTGGTTATTGGGGACTGGGGAAGAAGAGG 16881420 Score = 39.2 bits (42), Expect = 1.1 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 712 GCAAAGTGGAAAATAGTGATTGGTCACCATACGATCAAAAG 752 |||| ||||||||| || ||||||||||| | || | ||| Sbjct 16880192 GCAAGGTGGAAAATTGTTGTTGGTCACCATGCCATTAGAAG 16880152 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 6185199 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 6185165 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 8913143 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 8913109 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 40 TCAACCATTCCTTTCCTTATCTTCTTCCTCTTTTGCT 76 ||| | ||||||||||| |||||| |||||| || || Sbjct 15530320 TCATCTATTCCTTTCCTCATCTTC-TCCTCTCTTTCT 15530355 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 93.3 bits (102), Expect = 6e-17 Identities = 87/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 445 GTTTTAGGAAATCATGATTATAGAGGTGACGTCAGGGCACAACTTAGCCCTATGCTCA-G 503 ||||| || |||||||| ||||||||||||| ||||||||| || || || || | | Sbjct 12048894 GTTTTGGGTAATCATGACTATAGAGGTGACGCTTTGGCACAACTGAGTCCCATACTTAAG 12048953 Query 504 AGCTCTGGACAACAGATGGGTTTGCATGAGATCTTTCATTGTAAATGC 551 | | |||||| ||||||| ||||| || |||||||||||||||||| Sbjct 12048954 AAGT-TGGACAGCAGATGGCTTTGCTGGAAATCTTTCATTGTAAATGC 12049000 Score = 80.6 bits (88), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 6/119 (5%) Strand=Plus/Plus Query 883 ATACAATTTATGACAAGTGGAGGTGGATCCAAGGCCTGGAAAGGAGGTGACGTGAACTAC 942 || || ||| | |||||||| || || || ||||| |||| ||||||| || ||| Sbjct 12050492 ATTCAGTTTTTAACAAGTGGCGGAGGCTCAAAGGCATGGA---GAGGTGATGTTGACTGG 12050548 Query 943 --GTTGAA-CCAGAAGAGATGAGGTTTTACTACGACGGACAAGGTTTCATGTCGGTTCA 998 | ||| ||||| ||||||| ||| ||||||||||| ||||| |||||||| ||||| Sbjct 12050549 TGGCCGAATCCAGAGGAGATGAAGTTCTACTACGACGGGCAAGGCTTCATGTCCGTTCA 12050607 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/101 (76%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 445 GTTTTAGGAAATCATGATTATAGAGGTGACGTCAGGGCACAACTTAGCCCTATGCTCAGA 504 ||||| || || || |||||||| || || || ||||||| | || || || |||||| Sbjct 12072882 GTTTTGGGCAACCACGATTATAGGGGCGATGTAGAGGCACAATTGAGTCCCATCCTCAGA 12072941 Query 505 GCTCTGGACAACAGATGGGTTTGCATGAGATCTTTCATTGT 545 | ||||| |||||| | |||||||||||||| ||||| Sbjct 12072942 GAAATGGACCCTAGATGGCTGTGCATGAGATCTTTTATTGT 12072982 Score = 66.2 bits (72), Expect = 8e-09 Identities = 56/69 (81%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 712 GCAAAGTGGAAAATAGTGATTGGTCACCATACGATCAAAAGCGCAGGCCACCACGGGAAC 771 || |||||||| || ||| ||||||||||||| |||||||| || || |||| || ||| Sbjct 12049926 GCCAAGTGGAAGATCGTGGTTGGTCACCATACTATCAAAAGTGCTGGAAACCATGGTAAC 12049985 Query 772 ACCATTGAG 780 ||| |||| Sbjct 12049986 ACCGATGAG 12049994 Score = 64.4 bits (70), Expect = 3e-08 Identities = 107/155 (69%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 286 CAGATGGGAGAAATCGGAGAGAAATTAGATATCGATTTTGTGATTTCTACTGGAGATAAT 345 ||||||||| | ||||| || || || | ||||||||||| || || || ||||| Sbjct 12048603 CAGATGGGAATCGTTGGAGAAAAGTTGGACGTGGATTTTGTGATCTCCACCGGTGATAAC 12048662 Query 346 TTTTACGACAATGGTTTAACCAGCTTGCACGATCCTCTATTTCAAGATTCTTTTACCAAC 405 || ||||| ||||| || || | | ||||| |||| | || || || || | Sbjct 12048663 TTCTACGATGCCGGTTTGACAGGCGTCGATGATCCGGCATTTGACGAGTCGTTCACAGAT 12048722 Query 406 ATTTATACCGCTCCGAGCTTGCAGAAACCTTGGTA 440 || || || || || |||||||| || | ||||| Sbjct 12048723 ATCTACACAGCGCCTAGCTTGCAAAAGCAATGGTA 12048757 Score = 62.6 bits (68), Expect = 9e-08 Identities = 106/154 (69%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 287 AGATGGGAGAAATCGGAGAGAAATTAGATATCGATTTTGTGATTTCTACTGGAGATAATT 346 ||||||||| | | ||||| | |||| || || || || || || ||||| ||||| | Sbjct 12072253 AGATGGGAGTTGTGGCAGAGAGACTAGACATAGACTTCGTCATCTCAACTGGGGATAACT 12072312 Query 347 TTTACGACAATGGTTTAACCAGCTTGCACGATCCTCTATTTCAAGATTCTTTTACCAACA 406 |||| || | ||||| | ||| ||||| |||| | || || |||| || | Sbjct 12072313 TTTATGAGGACGGTTTGGATGGTGTGCTTGATCCGGAATTTAATGAATCCTTTATAAATA 12072372 Query 407 TTTATACCGCTCCGAGCTTGCAGAAACCTTGGTA 440 | || | | || ||||||||||||| ||||| Sbjct 12072373 TCTACGACTCCCCCAGCTTGCAGAAACAATGGTA 12072406 Score = 59.0 bits (64), Expect = 1e-06 Identities = 137/198 (69%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 871 GTGGACAGTAACATACAATTTATGACAAGTGGAGGTGGATCCAAGGCCTGGAAAGGAGGT 930 |||| |||| | | |||||| | || |||||||| || || ||||| |||| ||||| Sbjct 12074781 GTGG-CAGTCAAACCCAATTTCTAACCAGTGGAGGGGGTTCAAAGGCATGGA---GAGGT 12074836 Query 931 GACGTGAACTACGTTGAA-CCAGAAGAGATGAGGTTTTACTACGACGGACAAGGTTTCAT 989 ||| | | | || ||| ||||| || ||| | | || || || ||||| ||||| || Sbjct 12074837 GACATTAGGAA-GTGGAATCCAGAGGAATTGAAGCTATATTATGATGGACAGGGTTTTAT 12074895 Query 990 GTCGGTTCA--CGTTTCAGAAGCTGAACTGCGTGTA--GTCTTTTATGATGTTTTTGGAC 1045 ||| | || || || || | | |||| || || ||||||||||| || || Sbjct 12074896 GTCACTGCAAACGACTCC-AACC---AATGCGGATATTGTGTTTTATGATGTCTTCGGCA 12074951 Query 1046 ACGTTCTGCATCATTGGA 1063 | |||||||| | |||| Sbjct 12074952 ATGTTCTGCACAAATGGA 12074969 Score = 57.2 bits (62), Expect = 4e-06 Identities = 66/89 (74%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 200 CATCAAAAACCGATGGTACAGTGAGCTTTCTCGTTATCGGAGACTGGGGAAGAAGAGGCT 259 || ||||| |||| ||| | | |||||| | || |||||||||||||||||||||| Sbjct 12047230 CAACAAAAGCCGACGGTTCTCTAAGCTTTTTGGTCGTCGGAGACTGGGGAAGAAGAGGAG 12047289 Query 260 CCTATAATCAGTCCCAAGTAGCTCTTCAG 288 || || || | |||| |||| |||| Sbjct 12047290 GTTACAACCAAACTGAAGTTGCTCATCAG 12047318 Score = 53.6 bits (58), Expect = 5e-05 Identities = 73/102 (72%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 550 GCTGAGATCGTCGATTTGTTCTTCGTCGACACAACTCCGTTCGTCGATAAATACTTTATT 609 || || || || || || |||||| | || |||||||| || || || || ||||| | Sbjct 12049473 GCAGAAATTGTAGACTTTTTCTTCTTGGATACAACTCCTTTTGTTGACAAGTACTTCAAC 12049532 Query 610 CAACCAAATAAGCATGTTTATGACTGGAGCGGTGTATTACCT 651 | ||||| | || ||||||||||| || ||| ||||| Sbjct 12049533 AATCCAAAGGGCGAGGTCTATGACTGGAGAGGCGTACTACCT 12049574 Score = 51.8 bits (56), Expect = 2e-04 Identities = 84/121 (69%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 562 GATTTGTTCTTCGTCGACACAACTCCGTTCGTCGATAAATACTTTATTCAACCAAATAAG 621 || || ||| |||| ||||||||||| ||||| || | || |||| || ||||| || Sbjct 12073130 GACTTTTTCCTCGTAGACACAACTCCATTCGTTGACGAGTATTTTACCCACCCAAAGAAC 12073189 Query 622 CATGTTTATGACTGGAGCGGTGTATTACCTAGGCAAACATATCTGAATAATCTCTTAAAG 681 || || || |||| ||||| |||| | | |||||| |||||||| ||| Sbjct 12073190 CACACCTACGATTGGAAAGGTGTGCTACCACGAGAGGAATATCTATCAAATCTCTTGAAG 12073249 Query 682 G 682 | Sbjct 12073250 G 12073250 Score = 48.2 bits (52), Expect = 0.002 Identities = 48/61 (79%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 707 CAGTCGCAAAGTGGAAAATAGTGATTGGTCACCATACGATCAAAAGCGCAGGCCACCACG 766 |||| |||| ||||| || ||| | ||||| ||||| ||||||||||| || || || | Sbjct 12074060 CAGT-GCAAGATGGAAGATTGTGGTGGGTCATCATACAATCAAAAGCGCCGGGCATCATG 12074118 Query 767 G 767 | Sbjct 12074119 G 12074119 Score = 39.2 bits (42), Expect = 1.1 Identities = 32/38 (84%), Gaps = 2/38 (5%) Strand=Plus/Minus Query 45 CATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTA 82 ||||| ||||||||| |||||||||||| | ||||| Sbjct 5263129 CATTC--TTCCTTATCCTCTTCCTCTTTTCTTCTTCTA 5263094 Score = 39.2 bits (42), Expect = 1.1 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 61 TTCTTCCTCTTTTGCTTTTCT 81 ||||||||||||||||||||| Sbjct 13544722 TTCTTCCTCTTTTGCTTTTCT 13544742 Score = 39.2 bits (42), Expect = 1.1 Identities = 33/39 (85%), Gaps = 5/39 (13%) Strand=Plus/Minus Query 59 TCTTCTTCCTCTTTTGCTTTTCTAATCTC--TCAATGGC 95 |||||||||||| || ||||||||||| |||||||| Sbjct 23739065 TCTTCTTCCTCT---GCATTTCTAATCTCAATCAATGGC 23739030 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 119 ATTTGGTATTTTACGTTTATAATTT 143 || |||||||||| ||||||||||| Sbjct 2634603 ATGTGGTATTTTAGGTTTATAATTT 2634627 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 44 CCATTCCTTTCCTTATCTTCTTCCTCTTTTGC 75 ||||||||||||||||||| || | ||| ||| Sbjct 13287689 CCATTCCTTTCCTTATCTTTTTTC-CTTGTGC 13287659 Score = 37.4 bits (40), Expect = 3.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 51 TTTCCTTATCTTCTTCCTCTTTTGCTTTTC 80 ||| |||||||||||| |||| | |||||| Sbjct 14038360 TTTTCTTATCTTCTTCTTCTTCTTCTTTTC 14038331 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 36 AAAATCAACCATTCCTTTCCTTATCTTCTTCCTCTTT 72 || || || | || |||||||| |||||||||||||| Sbjct 14480887 AAGATAAAGCCTTTCTTTCCTT-TCTTCTTCCTCTTT 14480852 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 779 AGTTGGAGAAACACCTTTTACCTAT 803 |||||||||||||||||| ||| || Sbjct 21754788 AGTTGGAGAAACACCTTTCACCCAT 21754812 Score = 37.4 bits (40), Expect = 3.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 253 AGAGGCTCCTATAATCAGTCCCAAGTAG 280 ||||||||||||||||| |||||| || Sbjct 22013061 AGAGGCTCCTATAATCACGCCCAAGAAG 22013034 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 ||| ||| |||||||||||| || ||| ||||| Sbjct 27069897 TTCATTTTCTTATCTTCTTCTTCATTTTCTTTT 27069865 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 80.6 bits (88), Expect = 3e-13 Identities = 110/154 (71%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 287 AGATGGGAGAAATCGGAGAGAAATTAGATATCGATTTTGTGATTTCTACTGGAGATAATT 346 |||||||| ||| || ||||| || || |||||||| ||||||||||||| || | Sbjct 30160117 AGATGGGAAGAATTGGGGAGAAGTTGAGCATAGATTTTGTAGTTTCTACTGGAGACAACT 30160058 Query 347 TTTACGACAATGGTTTAACCAGCTTGCACGATCCTCTATTTCAAGATTCTTTTACCAACA 406 |||| || |||| | |||||| | | || ||| |||| | | || || |||| | Sbjct 30160057 TTTATGAGGATGGACTTACCAGCATAGATGACCCTGCATTTGAGAAGTCATTCGCCAAGA 30159998 Query 407 TTTATACCGCTCCGAGCTTGCAGAAACCTTGGTA 440 | || || ||| |||| ||||||| | ||||| Sbjct 30159997 TCTACACTGCTAAGAGCCTGCAGAAGCAATGGTA 30159964 Score = 75.2 bits (82), Expect = 1e-11 Identities = 112/159 (70%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 287 AGATGGGAGAAATCGGAGAGAAATTAGATATCGATTTTGTGATTTCTACTGGAGATAATT 346 |||||||| || |||||||| |||| ||| | ||||| |||| || |||||||||| Sbjct 30163040 AGATGGGAAGGATTGGAGAGAAGCTAGACATCAACTTTGTAGTTTCAACAGGAGATAATT 30162981 Query 347 TTTACGACAATGGTTTAACCAGCTTGCACGATCCTCTATTTCAAGATTCTTTTACCAACA 406 | || || |||| | || || || ||| | |||| | || || |||||||| Sbjct 30162980 TCTATGATGATGGACTGACTAGTGAACAGGATACAGCATTTGAGGAATCATTTACCAAAG 30162921 Query 407 TTTATACCGCTCCGAGCTTGCAGAAACCTTGGTATAGTG 445 | || || || ||| ||||||||| ||||| |||| Sbjct 30162920 TATACACAGCCAACAGCCTGCAGAAACAGTGGTACAGTG 30162882 Score = 60.8 bits (66), Expect = 3e-07 Identities = 81/110 (74%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 445 GTTTTAGGAAATCATGATTATAGAGGTGACGTCAG-GGCACAACTTAGCCCTATGCTCAG 503 ||||| || || ||||||||||| || | | ||| |||||| | |||||| | ||||| Sbjct 30162764 GTTTTGGGCAACCATGATTATAGGGGCAATG-CAGAAGCACAATTGAGCCCTCTCCTCAG 30162706 Query 504 AGCTCTGGACAACAGATGGGTTTGCATGAGATCTTTCATTGTAAATGCTG 553 | || | |||||| | ||| |||||||||| ||||| ||| ||| Sbjct 30162705 GAAAATTGATAGTAGATGGCTCTGCCTGAGATCTTTTATTGTGAATTCTG 30162656 Score = 57.2 bits (62), Expect = 4e-06 Identities = 87/119 (73%), Gaps = 9/119 (8%) Strand=Plus/Minus Query 883 ATACAATTTATGACAAGTGGAGGTGGATCCAAGGCCTGGAAAGGAGGTGACGTGAACT-A 941 ||||||||| | || ||||||| ||| |||||||| |||| ||||| || | || | Sbjct 30161819 ATACAATTTCTAACTAGTGGAGCTGGGTCCAAGGCATGGAGAGGAG---ACATTAAAGGA 30161763 Query 942 CGTTGAACCAGAAGAGA--TGAGGTTTTACTACGACGGACAAGGTTTCATGTCGGTTCA 998 | |||| ||| | | ||| ||| | ||| || ||||| ||||||||||| || || Sbjct 30161762 C--TGAAT-AGAGGTGGCCTGAAGTTCTTCTATGATGGACAGGGTTTCATGTCTGTCCA 30161707 Score = 57.2 bits (62), Expect = 4e-06 Identities = 49/61 (80%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 692 TGGCGTTGAGAGAGTCAGTCGCAAAGTGGAAAATAGTGATTGGTCACCATACGATCAAAA 751 |||| |||| ||||||| ||||| ||||| || || ||||||||||| | ||||||| Sbjct 30162256 TGGCATTGAAAGAGTCAACAGCAAAATGGAAGATTGTTGTTGGTCACCATGCCATCAAAA 30162197 Query 752 G 752 | Sbjct 30162196 G 30162196 Score = 48.2 bits (52), Expect = 0.002 Identities = 61/84 (73%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 205 AAAACCGATGGTACAGTGAGCTTTCTCGTTATCGGAGACTGGGGAAGAAGAGGCTCCTAT 264 |||| ||||| | | |||||| | || | || ||||||||||||||||| | | Sbjct 30163329 AAAAGTGATGGGTCGCTTAGCTTTTTGGTCGTTGGGGACTGGGGAAGAAGAGGGGCTTTC 30163270 Query 265 AATCAGTCCCAAGTAGCTCTTCAG 288 || || || ||||| |||| |||| Sbjct 30163269 AACCAATCTCAAGTTGCTCATCAG 30163246 Score = 44.6 bits (48), Expect = 0.025 Identities = 60/84 (71%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 205 AAAACCGATGGTACAGTGAGCTTTCTCGTTATCGGAGACTGGGGAAGAAGAGGCTCCTAT 264 ||| |||| || | | |||||| | || || ||||||||||||||||| || || Sbjct 30160452 AAAGCCGACGGCTCGCTTAGCTTTTTGGTGATTGGAGACTGGGGAAGAAGGGGACATTAC 30160393 Query 265 AATCAGTCCCAAGTAGCTCTTCAG 288 ||||| || | || ||| |||| Sbjct 30160392 AATCAATCTGATGTTGCTTATCAG 30160369 Score = 37.4 bits (40), Expect = 3.7 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 83 ATCTCTCAATGGCTACCTTAAAACACAA 110 || ||||||||||||||||| || |||| Sbjct 29138880 ATTTCTCAATGGCTACCTTATAAAACAA 29138853 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 42.8 bits (46), Expect = 0.087 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 ||||||||||| |||||||||| ||| | |||| Sbjct 2404170 TTCCTTTCCTTCTCTTCTTCCTTTTTGGGTTTT 2404138 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTT 71 ||||||||||| || |||||||||| Sbjct 6874499 TTCCTTTCCTTTTCCTCTTCCTCTT 6874523 Score = 37.4 bits (40), Expect = 3.7 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 45 CATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTAATCTCTC 89 |||| || | ||||||||||| |||||| |||| | | ||||| Sbjct 9952083 CATTTATTGCTTTATCTTCTTCTTCTTTTTTTTTTTTCACCTCTC 9952039 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 11214949 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 11214915 Score = 37.4 bits (40), Expect = 3.7 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||||||||||||||| || || ||||||| Sbjct 13125539 TTCCTTTCCTTATCTTCTT-CTATTCCTCTTTTCT 13125506 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1026 CTTTTATGATGTTTTTGGACACGTT 1050 ||||||||||||| ||||||| ||| Sbjct 22151872 CTTTTATGATGTTATTGGACAGGTT 22151848 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 41.0 bits (44), Expect = 0.31 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Minus Query 44 CCATTCCTTTCCTTATCTTCTTCCTCTTTTGCTT-TTCT 81 || |||||||| ||||||||||| |||| | ||| |||| Sbjct 19706052 CCTTTCCTTTCTTTATCTTCTTCTTCTTCTTCTTCTTCT 19706014 Score = 39.2 bits (42), Expect = 1.1 Identities = 34/41 (83%), Gaps = 1/41 (2%) Strand=Plus/Plus Query 644 TATTACCTAGGCAAACATATCTGAATAATCTCTTAAAGGAA 684 |||||||||||||| || || || ||||| | || |||||| Sbjct 6811097 TATTACCTAGGCAACCAAATGTGTATAAT-TATTTAAGGAA 6811136 Score = 39.2 bits (42), Expect = 1.1 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 46 ATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 |||||| | || | ||||||||||||| ||||||| Sbjct 9589497 ATTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 9589532 Score = 39.2 bits (42), Expect = 1.1 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 46 ATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 |||||||| || | ||||||||||||| |||||| Sbjct 10013901 ATTCCTTTTTTTCTTTTCTTCCTCTTTTTATTTTCT 10013936 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 118 AATTTGGTATTTTACGTTTATAATT 142 ||||||||||||||| |||| |||| Sbjct 21070888 AATTTGGTATTTTACATTTAAAATT 21070864 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 41.0 bits (44), Expect = 0.31 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||| || | ||||||||||||| ||||||| Sbjct 19963399 TTCCTTTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 19963433 Score = 41.0 bits (44), Expect = 0.31 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||| || | ||||||||||||| ||||||| Sbjct 20574581 TTCCTTTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 20574615 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 78 TTCTAATCTCTCAATGGCTACCTTAAAACACA 109 ||||| | ||||||||||||||||| || ||| Sbjct 11673494 TTCTATT-TCTCAATGGCTACCTTATAAAACA 11673524 Score = 37.4 bits (40), Expect = 3.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 44 CCATTCCTTTCCTTATCTTCTTCCTCTTTT 73 || || || |||| |||||||||||||||| Sbjct 13297942 CCTTTTCTATCCTCATCTTCTTCCTCTTTT 13297913 Score = 37.4 bits (40), Expect = 3.7 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 44 CCATTCCTTTCCTTATCTTCTTCCTCTTTT 73 || || || |||| |||||||||||||||| Sbjct 13301619 CCTTTTCTATCCTCATCTTCTTCCTCTTTT 13301590 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 41.0 bits (44), Expect = 0.31 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | |||| ||||||||||||| ||||||| Sbjct 14089639 TTCCTCTTTTTATTTTCTTCCTCTTTTTCTTTTCT 14089605 Score = 41.0 bits (44), Expect = 0.31 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||| | || ||||||||||||| ||||||| Sbjct 25297570 TTCCTTTTTTCATTTTCTTCCTCTTTTTCTTTTCT 25297604 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 41.0 bits (44), Expect = 0.31 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 51 TTTCCTTATCTTCTTCCTCTTTTGCTTTTC 80 ||| ||| || ||||||||||||||||||| Sbjct 21679110 TTTACTTTTCATCTTCCTCTTTTGCTTTTC 21679139 Score = 39.2 bits (42), Expect = 1.1 Identities = 30/35 (86%), Gaps = 2/35 (6%) Strand=Plus/Plus Query 116 TAAATTTGGTATTTTACGTTTATAATTTGATTATT 150 ||||||| ||||| | | |||||||||||||||| Sbjct 14908499 TAAATTT--TATTTCAAGATTATAATTTGATTATT 14908531 Score = 39.2 bits (42), Expect = 1.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 125 TATTTTACGTTTATAATTTGATTATT 150 ||||||| ||||||||||| |||||| Sbjct 36761672 TATTTTATGTTTATAATTTTATTATT 36761647 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 || |||| ||||||||||| || |||| ||||| Sbjct 4059920 TTACTTTTCTTATCTTCTTGCTTTTTTTCTTTT 4059888 Score = 37.4 bits (40), Expect = 3.7 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 1199 AGAACATATCAGCAGCATCAGaaaaaa 1225 ||||| ||| ||||||||||||||||| Sbjct 22170610 AGAAC-TATGAGCAGCATCAGAAAAAA 22170585 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 44 CCATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 || ||||| | || | ||||||||||||| ||||||| Sbjct 23004587 CCTTTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 23004624 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 524 TTTGCATGAGATCTTTCATTGTAAA 548 ||||||||| || |||||||||||| Sbjct 40800191 TTTGCATGAAATTTTTCATTGTAAA 40800215 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 39.2 bits (42), Expect = 1.1 Identities = 34/42 (81%), Gaps = 3/42 (7%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTAATCTCT 88 ||||||||||| ||||| |||||| ||||||| ||||| Sbjct 2420240 TTCCTTTCCTT---TTCTTTTTCTTTTTCTTTTCTTTTCTCT 2420202 Score = 39.2 bits (42), Expect = 1.1 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 49 CCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 |||||||||||||||||| || ||| |||| Sbjct 14676530 CCTTTCCTTATCTTCTTCTTCCTTTATTTTT 14676500 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 ||||||||||| ||||||| || | || ||||| Sbjct 3163135 TTCCTTTCCTTTTCTTCTTTCTTTCTTTCTTTT 3163167 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 126 ATTTTACGTTTATAATTTGATTAT-TATATTCTCCTC 161 ||||| |||||||||||||||| |||||| || || Sbjct 9385147 ATTTTTTTTTTATAATTTGATTATATATATTATCATC 9385111 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Minus Query 46 ATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTAA 83 ||| ||| |||| ||||| | |||||||||||| ||| Sbjct 9626332 ATTGCTTGCCTTTTCTTCCCCATCTTTTGCTTTTTTAA 9626295 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 39.2 bits (42), Expect = 1.1 Identities = 37/45 (82%), Gaps = 2/45 (4%) Strand=Plus/Minus Query 46 ATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT-AATCTCTC 89 ||||||||||| |||||| ||| ||||| || | || ||||||| Sbjct 8851764 ATTCCTTTCCTCATCTTC-TCCACTTTTCCTCTCCTCCATCTCTC 8851721 Score = 39.2 bits (42), Expect = 1.1 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 49 CCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 ||||| |||||||||||| |||| | ||||| Sbjct 11852183 CCTTTTCTTATCTTCTTCTTCTTCTTCTTTT 11852153 Score = 37.4 bits (40), Expect = 3.7 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||||||| ||||| |||||| || |||| || Sbjct 8847571 TTCCTTTCCTTTTCTTC-TCCTCTCTTTCTTTCCT 8847538 Score = 37.4 bits (40), Expect = 3.7 Identities = 34/43 (79%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 36 AAAATCAACCATTCCTTTCCTTATCTTCTTCCTCTTTTGCTTT 78 ||||| | | |||||| |||||||||||| || ||| |||| Sbjct 9798944 AAAATTATACTTTCCTTCTCTTATCTTCTTCTTCATTTTCTTT 9798902 Score = 37.4 bits (40), Expect = 3.7 Identities = 32/39 (82%), Gaps = 3/39 (8%) Strand=Plus/Minus Query 110 AACCTGTAAATTTGGTATTTTACGTTT---ATAATTTGA 145 || || ||||||||||| |||| |||| ||||||||| Sbjct 11419419 AATCTATAAATTTGGTAATTTAAGTTTAAAATAATTTGA 11419381 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 39.2 bits (42), Expect = 1.1 Identities = 28/32 (88%), Gaps = 3/32 (9%) Strand=Plus/Minus Query 117 AAATTTGGTATTTTACGTTT---ATAATTTGA 145 ||||||||||||||| |||| ||||||||| Sbjct 13136723 AAATTTGGTATTTTAAGTTTAAAATAATTTGA 13136692 Score = 37.4 bits (40), Expect = 3.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 51 TTTCCTTATCTTCTTCCTCTTTT 73 |||||||||||||||| |||||| Sbjct 3175351 TTTCCTTATCTTCTTCATCTTTT 3175329 Score = 37.4 bits (40), Expect = 3.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 51 TTTCCTTATCTTCTTCCTCTTTT 73 |||||||||||||||| |||||| Sbjct 3180100 TTTCCTTATCTTCTTCATCTTTT 3180078 Score = 37.4 bits (40), Expect = 3.7 Identities = 30/35 (86%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 48 TCCTTTCCTTATCTTCTTCCTCTT-TTGCTTTTCT 81 |||||| ||||||||||| |||| || ||||||| Sbjct 4251389 TCCTTTTTTTATCTTCTTCGTCTTCTTCCTTTTCT 4251355 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1218 AGaaaaaaaaGTCAATGAAATCTTT 1242 |||||||||| ||||||||||||| Sbjct 28020432 AGAAAAAAAATCCAATGAAATCTTT 28020456 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 138 TAATTTGATTATTATATTCTCCTCC 162 |||||| ||||| |||||||||||| Sbjct 29666270 TAATTTCATTATAATATTCTCCTCC 29666246 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 39.2 bits (42), Expect = 1.1 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 59 TCTTCTTCCTCTTTTGCTTTTCTAATCTCTCAAT 92 ||||||||||||||| ||| ||| |||||||| Sbjct 21000647 TCTTCTTCCTCTTTTCTTTTCCTAGGCTCTCAAT 21000680 Score = 37.4 bits (40), Expect = 3.7 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 58 ATCTTCTTCCTCTTTTGCTTTTC 80 ||||||||||||||||| ||||| Sbjct 1227414 ATCTTCTTCCTCTTTTGTTTTTC 1227392 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTAA 83 |||||| |||||||||||| || ||| | ||||||| Sbjct 12791509 TTCCTTCTCTTATCTTCTTCTTCATTTTC-TTTCTAA 12791544 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 39.2 bits (42), Expect = 1.1 Identities = 31/35 (89%), Gaps = 2/35 (6%) Strand=Plus/Plus Query 115 GTAAATT-TGGTATTTTACGTTTATAATTTGATTA 148 ||||||| |||| ||||| ||||||||||| |||| Sbjct 11824451 GTAAATTCTGGT-TTTTATGTTTATAATTTTATTA 11824484 Score = 39.2 bits (42), Expect = 1.1 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 125 TATTTTACGTTTATAATTTGATTATTATATT 155 ||||||| ||||||||||| |||||| ||| Sbjct 21207083 TATTTTAATTTTATAATTTGTTTATTAAATT 21207053 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 56 TTATCTTCTTCCTCTTTTGCTTTTC 80 || |||||||| ||||||||||||| Sbjct 8547469 TTTTCTTCTTCTTCTTTTGCTTTTC 8547493 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 561 CGATTTGTTCTTCGTCGACACAACT 585 ||||||| |||| |||||||||||| Sbjct 12330845 CGATTTGATCTTGGTCGACACAACT 12330869 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 29 TCACAACAAAATCAACCATTCCTTTCCTTATC 60 ||||| | ||| ||||||||||||||||| || Sbjct 15611869 TCACA-CTAAAGCAACCATTCCTTTCCTTGTC 15611839 Score = 37.4 bits (40), Expect = 3.7 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCTAAT 84 ||||| | || | ||||||||||||| ||||||| || Sbjct 29181233 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCTCAT 29181270 Score = 37.4 bits (40), Expect = 3.7 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 43 ACCATTCCTTTC-CTTATCTTCTTCCTCTT 71 || |||| |||| ||||||||||||||||| Sbjct 36600909 ACTATTCATTTCTCTTATCTTCTTCCTCTT 36600880 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||||||||| |||| || | ||||| |||||| Sbjct 3067993 TTCCTTTCCTTTTCTTTTTATTTTTTTGTTTTTCT 3067959 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 13960262 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 13960228 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 13960279 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 13960245 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 125 TATTTTACGTTTATAATTTGAT-TATTATATT 155 |||||| ||||||||||||| ||||||||| Sbjct 14719590 TATTTTCTCTTTATAATTTGATATATTATATT 14719559 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 15331309 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 15331343 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 19145885 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 19145851 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/34 (85%), Gaps = 2/34 (6%) Strand=Plus/Plus Query 119 ATTTGGTATTTTACGTTTATA--ATTTGATTATT 150 |||||||||||||| |||||| ||| |||||| Sbjct 25341561 ATTTGGTATTTTACATTTATATCCTTTAATTATT 25341594 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 37.4 bits (40), Expect = 3.7 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 49 CCTTTCCTTATCTTCTTCCTCTTTT 73 ||||| |||||||||||| |||||| Sbjct 16951480 CCTTTTCTTATCTTCTTCTTCTTTT 16951504 Score = 37.4 bits (40), Expect = 3.7 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTT 79 || ||||| ||||||||||| ||||| ||||| Sbjct 19921954 TTTCTTTCTTTATCTTCTTCTTCTTTCTCTTTT 19921922 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 37.4 bits (40), Expect = 3.7 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 47 TTCCTTTCCTTATCTTCTTCCTCTTTTGCTTTTCT 81 ||||| | || | ||||||||||||| ||||||| Sbjct 20997342 TTCCTCTTTTTCTTTTCTTCCTCTTTTTCTTTTCT 20997376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 653366331852 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2