BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= Length=221 Score E Sequences producing significant alignments: (Bits) Value lcl|Jr3D 399 4e-110 lcl|Jr3S 295 1e-78 lcl|Jr4D 223 7e-57 lcl|Jr7S 150 4e-35 lcl|Jr2D 127 4e-28 lcl|Jr4S 82.4 2e-14 lcl|Jr5D 78.8 2e-13 lcl|Jr6D 51.8 3e-05 lcl|Jr8D 48.2 3e-04 lcl|Jr1D 39.2 0.17 lcl|Jr8S 35.6 2.0 lcl|Jr7D 35.6 2.0 lcl|Jr6S 33.7 7.1 lcl|Jr2S 33.7 7.1 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 399 bits (442), Expect = 4e-110 Identities = 221/221 (100%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5532710 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 5532651 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5532650 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 5532591 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5532590 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 5532531 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 ||||||||||||||||||||||||||||||||||||||||| Sbjct 5532530 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 5532490 Score = 33.7 bits (36), Expect = 7.1 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 69 TTGGTTGATTGTTCTTAT 86 |||||||||||||||||| Sbjct 36311519 TTGGTTGATTGTTCTTAT 36311536 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 295 bits (326), Expect = 1e-78 Identities = 198/221 (90%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 |||||||| || ||||||||| |||||| ||| ||||| | || |||||||| ||| | Sbjct 24737156 GGTAAATATACACCTCAATACACATGGCTCGAAGAGGAACTACCGAAAGTTAATAGGGCC 24737215 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 |||||||||||| |||||||||| | ||||||||| |||||||||||||| ||||||||| Sbjct 24737216 GAGACACCTTGGCTGATTGTTCTCACGCATTCCCCTTGGTATAATAGCTATAACTATCAT 24737275 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct 24737276 TATATGGAGGGGGAAACCATGAGAGTAATGTTTGAGGCCTGGTTTGTGAAGTATAAAGTT 24737335 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 |||||||||||||| |||||||||||||||||||| ||||| Sbjct 24737336 GATGTGGTATTTGCTGGTCATGTTCATGCTTATGAGCGATC 24737376 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 223 bits (246), Expect = 7e-57 Identities = 182/221 (82%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 || |||||||| || |||||| ||||||||| | ||||| |||| | ||| ||||||||| Sbjct 28097729 GGGAAATACACTCCACAATACAAATGGCTTGTAAAGGAACTGCCCAGAGTAAACAGGACT 28097788 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 ||||| || ||| | || ||| ||||||||| ||| |||| ||| || ||||| Sbjct 28097789 GAGACGCCGTGGCTTATCGTTTTTATGCATTGCCCACTATATAGTAGTTATGTACATCAT 28097848 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||| ||||||||||||||||| || |||||| |||||||||| |||| |||||| Sbjct 28097849 TATATGGAAGGGGAAACCATGAGAGTGATTTATGAGCAATGGTTTGTGGAGTATAAAGTT 28097908 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 ||||| || ||||| |||||||||||||| ||||||||||| Sbjct 28097909 GATGTTGTCTTTGCTGGTCATGTTCATGCCTATGAACGATC 28097949 Score = 147 bits (162), Expect = 4e-34 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 ||||||||||| ||||||||| ||||| ||||||| | | |||||||| | || Sbjct 7757932 GGTAAATACACTCCTCAATACACTTGGCTCAAACAGGAGCTCACCAAAGTTAATCGAGCT 7757991 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 || || || ||| | || |||||| | || || || |||||||| ||| ||||||| ||| Sbjct 7757992 GAAACTCCATGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 7758051 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 | |||||| || |||| ||||||||| | ||| |||||||| | ||||||| Sbjct 7758052 TTTATGGAAGGAGAAAGCATGAGAGTGGCTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 7758111 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || | || || || |||||||||||||| ||||| || || Sbjct 7758112 GACATTGTGTTAGCCGGTCATGTTCATGCCTATGAGCGTTC 7758152 Score = 35.6 bits (38), Expect = 2.0 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 24 ATGGCTTGAACAGGAATTGCCAAA 47 ||||||||||||||| ||||||| Sbjct 33623160 ATGGCTTGAACAGGAGATGCCAAA 33623137 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 150 bits (166), Expect = 4e-35 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 ||||||||||| ||||||||| ||||| || |||| | | ||||| || | || Sbjct 19374186 GGTAAATACACTCCTCAATACACTTGGCTCCAAAAGGAGCTCACCAAAGTAAATCGAGCT 19374245 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 || || || ||| | || |||||| | || || || |||||||| ||| ||||||| ||| Sbjct 19374246 GAAACTCCATGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 19374305 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||| || |||| ||||||||| | | ||| |||||||| | ||||||| Sbjct 19374306 TATATGGAAGGAGAAAGCATGAGAGTGACTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 19374365 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || | || ||||| |||||||||||||| ||||| || || Sbjct 19374366 GACATTGTTTTTGCTGGTCATGTTCATGCCTATGAGCGTTC 19374406 Score = 35.6 bits (38), Expect = 2.0 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 114 CTATCATTATATGGAGGGGGAAAC 137 ||| |||||||||||||||| ||| Sbjct 290044 CTAACATTATATGGAGGGGGTAAC 290067 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 127 bits (140), Expect = 4e-28 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 7 TACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAGACA 66 ||||||||||||| |||||| || | || || ||| ||| ||||| |||| Sbjct 40280853 TACACCCCTCAATGGATGTGGCTTAAAGAAGAGTTAACAAGGGTTGACAGGGAGAAGACT 40280794 Query 67 CCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCATTATATG 126 |||||| | ||||||||||||||| || || |||||| | | ||| || ||| Sbjct 40280793 CCTTGGCTCATTGTTCTTATGCATGTGCCAATCTACAATAGCAATGAAGCTCACTACATG 40280734 Query 127 GAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTTGATGTG 186 |||||||||| ||| ||| | | |||| | ||||| | | |||||||||||||| Sbjct 40280733 GAGGGGGAAAGTATGCGAGCTGTATTTGAGAGTTGGTTCATCCATTACAAAGTTGATGTA 40280674 Query 187 GTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || ||||| || ||||| |||||||||||| |||| Sbjct 40280673 GTCTTTGCTGGCCATGTCCATGCTTATGAAAGATC 40280639 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 82.4 bits (90), Expect = 2e-14 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 4 AAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAG 63 ||||| || | ||||| ||||| || | ||| | || ||| | |||| || Sbjct 1043392 AAATATACACTTCAATGGAGGTGGCTGCAAAAAGAACTAAAAAGAGTGGATAGGAGGAAG 1043451 Query 64 ACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCATTAT 123 ||||||||| | ||| |||| ||||| ||| || | ||| || || ||| Sbjct 1043452 ACACCTTGGCTTATTATTCTCCTGCATGTACCCATCTACAGTAGTAACTCAGCCCACTAT 1043511 Query 124 ATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTTGAT 183 ||||| || |||| ||| ||| | | |||| |||||||||| || | ||||||| Sbjct 1043512 ATGGAAGGTGAAAGTATGCGAGCTGTCTTTGAGAGATGGTTTGTCTGTTATAGAGTTGAT 1043571 Query 184 GTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 | |||||||| || || |||||||| |||||| |||| Sbjct 1043572 TTCGTATTTGCTGGGCACGTTCATGCCTATGAAAGATC 1043609 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 78.8 bits (86), Expect = 2e-13 Identities = 147/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 14 CTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAGACACCTTGGT 73 |||| ||| | |||||||| || ||| | || ||| |||||| | || || ||| Sbjct 1111831 CTCAGTACAAGTGGCTTGAGGCCGATTTGGCCAACGTTGACAGGAAGAAAACGCCATGGA 1111772 Query 74 TGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAAC-TATCATTATATGGAGGGG 132 | |||| || ||||| ||||||||||||| | ||| || ||| | || || Sbjct 1111771 TCTTTGTGCTCTTGCATGCCCCCTGGTATAACA-CTAATACAGCACATCAAGGTGAAGGA 1111713 Query 133 GAAACCATGAGAGTAATGTATG--AGGGATGGTTTGTGAAGTACAAAGTTGATGTGGTAT 190 |||| ||||||| || |||| || | || | | | | | || || || ||||| | Sbjct 1111712 GAAAGCATGAGA-AAAGCTATGGAAGAGTTGCTGTATAAGGCAC-GGGTCGACGTGGTTT 1111655 Query 191 TTGCAGGTCATGTTCATGCTTATGAACGAT 220 ||||||| ||||||||||| |||||||||| Sbjct 1111654 TTGCAGGCCATGTTCATGCATATGAACGAT 1111625 Score = 68.0 bits (74), Expect = 3e-10 Identities = 143/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 13 CCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAGACACCTTGG 72 ||||| ||| ||||||| || || ||| | |||| || |||| |||| || ||| Sbjct 1123623 CCTCAGTACAAATGGCTGGAGTCTGATTTGGCTCAAGTCAATAGGAAGAAGACCCCCTGG 1123564 Query 73 TTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTA-TCATTATATGGAGGG 131 | ||||||| ||||| | || |||||||||| ||| || |||| | || || Sbjct 1123563 GTTCTTGTTCTGTTGCATGCGCCTTGGTATAATA-CTAATACAGCTCATCAAGGCGAAGG 1123505 Query 132 GGAAACCATGAGAGTAATGTATGAGG-GATGGTTTGTGAAGTACAAAGTTGATGTGGTAT 190 |||| ||||||| || ||| | || | | | | | || || ||| |||| | Sbjct 1123504 AGAAATCATGAGACAAACAATGGAGAAGCTGTTGTATAAGGCACGG-GTCGATTTGGTTT 1123446 Query 191 TTGCAGGTCATGTTCATGCTTATGAACG 218 |||| || ||||||||||| |||||||| Sbjct 1123445 TTGCTGGACATGTTCATGCATATGAACG 1123418 Score = 37.4 bits (40), Expect = 0.58 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 168 GAAGTACAAAGTTGATGTGGTATTTGCA 195 |||||| |||||||||||| ||||| || Sbjct 30590099 GAAGTATAAAGTTGATGTGCTATTTACA 30590126 Score = 35.6 bits (38), Expect = 2.0 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 173 ACAAAGTTGATGTGGTATTTGCAG 196 |||||| |||| |||||||||||| Sbjct 9357303 ACAAAGATGATATGGTATTTGCAG 9357280 Score = 35.6 bits (38), Expect = 2.0 Identities = 25/29 (86%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 127 GAGGGGGAAACCATGAGAGTAATGTATGA 155 |||| | ||||||||||||| ||||||| Sbjct 15928225 GAGGAGAAAACCATGAGAGTCCTGTATGA 15928253 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 51.8 bits (56), Expect = 3e-05 Identities = 121/178 (68%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 44 CAAAAGTTAACAGGACTGAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATA 103 ||||||| || ||| ||||||||||| |||| || || | ||| || ||||||| Sbjct 36166037 CAAAAGTGGACCGGAAAAAGACACCTTGGCTGATCGTGCTATTCCATGTTCCTTGGTATA 36165978 Query 104 ATAGCTACAACTATCATTATA-TGGAGGGG--GAAACCATGAGAGTAATGTATGAGGGAT 160 | || |||| |||| | || ||| | || | |||| | ||| | | | Sbjct 36165977 ACAGTAACAAGGCTCATCAAGGTGAAGGTGACGATATGATGATGGCCATGGA--ACCCTT 36165920 Query 161 GGTTTGTGAAGTACAAAGTTGATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACG 218 | ||| || | ||| || ||| | ||| |||| ||||||||||||||||| ||||| Sbjct 36165919 GCTTTATGCCGC-CAATGTGGATATAGTACTTGCTGGTCATGTTCATGCTTACGAACG 36165863 Score = 33.7 bits (36), Expect = 7.1 Identities = 29/35 (83%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 176 AAGTTGATGTGGTATTTGCAGGTCATGTTCATGCT 210 ||||| |||| | ||| || |||||||||||||| Sbjct 20326950 AAGTTCATGTTATGTTT-CAAGTCATGTTCATGCT 20326983 Score = 33.7 bits (36), Expect = 7.1 Identities = 29/35 (83%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 176 AAGTTGATGTGGTATTTGCAGGTCATGTTCATGCT 210 ||||| |||| | ||| || |||||||||||||| Sbjct 20931828 AAGTTCATGTTATGTTT-CAAGTCATGTTCATGCT 20931861 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 48.2 bits (52), Expect = 3e-04 Identities = 34/39 (87%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAA 39 |||||||| || |||||||||||||| || ||| ||||| Sbjct 13840848 GGTAAATATACGCCTCAATACCAATGCCTCGAAGAGGAA 13840886 Score = 37.4 bits (40), Expect = 0.58 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 51 TAACAGGACTGAG--ACACCTTGGTTGATTGTTCTTATG 87 || || |||||| | ||||||||||||||||| |||| Sbjct 25789251 TACCATGACTGAACAAAACCTTGGTTGATTGTTCATATG 25789289 Score = 33.7 bits (36), Expect = 7.1 Identities = 25/27 (93%), Gaps = 2/27 (7%) Strand=Plus/Plus Query 167 TGAAGT-ACAAAGTTGATGTGGTATTT 192 |||||| ||||| |||||||||||||| Sbjct 246323 TGAAGTTACAAA-TTGATGTGGTATTT 246348 Score = 33.7 bits (36), Expect = 7.1 Identities = 29/35 (83%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 176 AAGTTGATGTGGTATTTGCAGGTCATGTTCATGCT 210 |||| |||| || ||| || |||||||||||||| Sbjct 16985117 AAGTCCATGTTGTGTTT-CAAGTCATGTTCATGCT 16985150 Score = 33.7 bits (36), Expect = 7.1 Identities = 28/33 (85%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 146 TAATGTATGAGGGATGG-TTTGTGAAGTACAAA 177 |||||||||||||| || ||| || | |||||| Sbjct 31296212 TAATGTATGAGGGAAGGTTTTTTGTACTACAAA 31296180 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 39.2 bits (42), Expect = 0.17 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 30 TGAACAGGAATTGCCAAAAGTTAA 53 ||| |||||||||||||||||||| Sbjct 51724659 TGATCAGGAATTGCCAAAAGTTAA 51724682 Score = 35.6 bits (38), Expect = 2.0 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 139 ATGAGAGTAATGTATGAGG 157 ||||||||||||||||||| Sbjct 14185421 ATGAGAGTAATGTATGAGG 14185403 Score = 33.7 bits (36), Expect = 7.1 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 103 AATAGCTACAACTATCATTATAT 125 |||||||| || ||||||||||| Sbjct 12035123 AATAGCTATAATTATCATTATAT 12035101 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 35.6 bits (38), Expect = 2.0 Identities = 27/31 (87%), Gaps = 1/31 (3%) Strand=Plus/Minus Query 14 CTCAATACCAATGGCTTGAACAGGAA-TTGC 43 |||||||| ||||||||||| || || |||| Sbjct 6281195 CTCAATACAAATGGCTTGAAAAGTAAGTTGC 6281165 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 35.6 bits (38), Expect = 2.0 Identities = 29/34 (85%), Gaps = 1/34 (3%) Strand=Plus/Plus Query 102 TAATAGCTACAACTATCATTATATGGAGGGGGAA 135 ||||| | |||| || ||||||||||||||||| Sbjct 3123732 TAATACC-ACAAATAATATTATATGGAGGGGGAA 3123764 Score = 33.7 bits (36), Expect = 7.1 Identities = 24/28 (86%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 130 GGGGAAACCATGAGAGTAATGTATGAGG 157 ||||||||||| || | |||| |||||| Sbjct 13894990 GGGGAAACCATTAGTGAAATGCATGAGG 13894963 Score = 33.7 bits (36), Expect = 7.1 Identities = 29/35 (83%), Gaps = 1/35 (3%) Strand=Plus/Minus Query 176 AAGTTGATGTGGTATTTGCAGGTCATGTTCATGCT 210 ||||| |||| | ||| || |||||||||||||| Sbjct 14418816 AAGTTCATGTTATGTTT-CAAGTCATGTTCATGCT 14418783 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 33.7 bits (36), Expect = 7.1 Identities = 23/25 (92%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 66 ACCTTGGTTGATTGTTCTTATGCAT 90 |||||||||||||||| ||| |||| Sbjct 3083299 ACCTTGGTTGATTGTTGTTA-GCAT 3083276 Score = 33.7 bits (36), Expect = 7.1 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 116 ATCATTATATGGAGGGGGAAA 136 ||||||||| ||||||||||| Sbjct 20100943 ATCATTATAAGGAGGGGGAAA 20100923 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 33.7 bits (36), Expect = 7.1 Identities = 29/35 (83%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 176 AAGTTGATGTGGTATTTGCAGGTCATGTTCATGCT 210 |||| |||| ||||| || |||||||||||||| Sbjct 17641311 AAGTCCATGTTATATTT-CAAGTCATGTTCATGCT 17641344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102656603904 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2