BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jm3101_genome.fa 154 sequences; 527,895,757 total letters Query= Length=221 Score E Sequences producing significant alignments: (Bits) Value lcl|Jm3D 390 2e-107 lcl|Jm3S 309 6e-83 lcl|Jm8S 297 4e-79 lcl|Jm4D 223 7e-57 lcl|Jm7S 159 7e-38 lcl|Jm2D 132 1e-29 lcl|Jm4S 78.8 2e-13 lcl|Jm5D 77.0 7e-13 lcl|Jm6D 50.0 9e-05 lcl|Jm1D 39.2 0.17 lcl|Jm2S 35.6 2.0 lcl|Jm8D 33.7 7.0 lcl|Jm7D 33.7 7.0 lcl|Jm6S 33.7 7.0 lcl|Jm5S 33.7 7.0 lcl|Jm1S 33.7 7.0 >Query1 on lcl|Jm3D| Query1 on lcl|Jm3D Length=39900371 Score = 390 bits (432), Expect = 2e-107 Identities = 219/221 (99%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5459449 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 5459390 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5459389 GAGACACCTTGGTTGATTGTTCTAATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 5459330 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5459329 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 5459270 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 |||||||||||||||||||||||||| |||||||||||||| Sbjct 5459269 GATGTGGTATTTGCAGGTCATGTTCACGCTTATGAACGATC 5459229 >Query1 on lcl|Jm3S| Query1 on lcl|Jm3S Length=27832763 Score = 309 bits (342), Expect = 6e-83 Identities = 201/221 (91%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 |||||||| || ||||||||| |||||||||| ||||| | || |||||||| ||||| Sbjct 24071713 GGTAAATATACGCCTCAATACACATGGCTTGAAGAGGAACTACCGAAAGTTAATAGGACC 24071772 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 |||||||||||| |||||||||| | ||||||||| |||||||||||||| ||||||||| Sbjct 24071773 GAGACACCTTGGCTGATTGTTCTCACGCATTCCCCTTGGTATAATAGCTATAACTATCAT 24071832 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 24071833 TATATGGAGGGGGAAACCATGAGAGTAATGTTTGAGGCCTGGTTTGTGAAGTACAAAGTT 24071892 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 |||||||||||||| |||||||||||||||||||| ||||| Sbjct 24071893 GATGTGGTATTTGCTGGTCATGTTCATGCTTATGAGCGATC 24071933 Score = 33.7 bits (36), Expect = 7.0 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 188 TATTTGCAGGTCATGTTC 205 |||||||||||||||||| Sbjct 5133655 TATTTGCAGGTCATGTTC 5133672 >Query1 on lcl|Jm8S| Query1 on lcl|Jm8S Length=19962766 Score = 297 bits (328), Expect = 4e-79 Identities = 193/212 (91%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 2 GTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTG 61 ||||||| || ||||||||| ||||||| || ||||| | || |||||||| ||||| | Sbjct 356857 GTAAATATACACCTCAATACAAATGGCTCAAAGAGGAACTACCGAAAGTTAATAGGACCG 356916 Query 62 AGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCATT 121 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 356917 AGACACCTTGGTTGATTGTTCTTATGCATTCCCCTTGGTATAATAGCTATAACTATCATT 356976 Query 122 ATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTTG 181 |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 356977 ATATGGAGGGGGAAGCCATGAGAGTAATGTTTGAGGCTTGGTTTGTGAAGTACAAAGTTG 357036 Query 182 ATGTGGTATTTGCAGGTCATGTTCATGCTTAT 213 |||| |||||||| |||||||||||||||||| Sbjct 357037 ATGTTGTATTTGCTGGTCATGTTCATGCTTAT 357068 Score = 33.7 bits (36), Expect = 7.0 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 89 ATTCCCCCTGGTATAATAGCT 109 |||||||| |||||||||||| Sbjct 13346812 ATTCCCCCAGGTATAATAGCT 13346832 >Query1 on lcl|Jm4D| Query1 on lcl|Jm4D Length=35629462 Score = 223 bits (246), Expect = 7e-57 Identities = 182/221 (82%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 || |||||||| || |||||| ||||||||| | ||||| |||| | ||| ||||||||| Sbjct 27873767 GGGAAATACACTCCACAATACAAATGGCTTGTAAAGGAACTGCCCAGAGTGAACAGGACT 27873826 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 ||||| || ||| | || ||| ||||||||| ||| |||| ||| || ||||| Sbjct 27873827 GAGACGCCGTGGCTTATCGTTTTTATGCATTGCCCACTATATAGTAGTTATGTACATCAT 27873886 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||| ||||||||||||||||| || |||||| |||||||||| |||| |||||| Sbjct 27873887 TATATGGAAGGGGAAACCATGAGAGTGATTTATGAGCAATGGTTTGTGGAGTATAAAGTT 27873946 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 ||||| || ||||| |||||||||||||| ||||||||||| Sbjct 27873947 GATGTTGTCTTTGCTGGTCATGTTCATGCCTATGAACGATC 27873987 Score = 150 bits (166), Expect = 4e-35 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 ||||||||||| ||||||||| ||||| ||||||| | | |||||||| | || Sbjct 7641596 GGTAAATACACTCCTCAATACACTTGGCTCAAACAGGAGCTCACCAAAGTTAATCGAGCT 7641655 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 || || || ||| | || |||||| | || || || |||||||| ||| ||||||| ||| Sbjct 7641656 GAAACTCCATGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 7641715 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 | |||||| || |||| ||||||||| | ||| |||||||| | ||||||| Sbjct 7641716 TTTATGGAAGGAGAAAGCATGAGAGTGGCTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 7641775 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || | || ||||| |||||||||||||| ||||| || || Sbjct 7641776 GACATTGTGTTTGCCGGTCATGTTCATGCCTATGAGCGTTC 7641816 >Query1 on lcl|Jm7S| Query1 on lcl|Jm7S Length=21889424 Score = 159 bits (176), Expect = 7e-38 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 60 ||||||||||| ||||||||| ||||| || |||| | | |||||||| | || Sbjct 18698313 GGTAAATACACTCCTCAATACACTTGGCTCCAAAAGGAGCTCACCAAAGTTAATCGAGCT 18698372 Query 61 GAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 120 || || |||||| | || |||||| | || || || |||||||| ||| ||||||| ||| Sbjct 18698373 GAAACTCCTTGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 18698432 Query 121 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 180 |||||||| || |||| ||||||||| | | ||| |||||||| | ||||||| Sbjct 18698433 TATATGGAAGGAGAAAGCATGAGAGTGACTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 18698492 Query 181 GATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || | || ||||| |||||||||||||| ||||| || || Sbjct 18698493 GACATTGTTTTTGCTGGTCATGTTCATGCCTATGAGCGTTC 18698533 Score = 35.6 bits (38), Expect = 2.0 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 114 CTATCATTATATGGAGGGGGAAAC 137 ||| |||||||||||||||| ||| Sbjct 324276 CTAACATTATATGGAGGGGGTAAC 324299 Score = 33.7 bits (36), Expect = 7.0 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 187 GTATTTGCAGGTCATGTT 204 |||||||||||||||||| Sbjct 6370993 GTATTTGCAGGTCATGTT 6370976 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 132 GGAAACCATGAGAGTAATGTATG 154 ||||||||||| | ||||||||| Sbjct 18050584 GGAAACCATGAAAATAATGTATG 18050562 Score = 33.7 bits (36), Expect = 7.0 Identities = 23/26 (88%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 66 ACCTTGGTTGATTGTTCTTATGCATT 91 ||||| ||||||||||| |||| ||| Sbjct 19498307 ACCTTCGTTGATTGTTCGTATGGATT 19498282 >Query1 on lcl|Jm2D| Query1 on lcl|Jm2D Length=43614719 Score = 132 bits (146), Expect = 1e-29 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 4 AAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAG 63 || ||||||||||||| |||||| || | || || ||| ||| ||||| || Sbjct 39777555 AAGTACACCCCTCAATGGATGTGGCTTAAAGAAGAGTTATCAAGGGTTGACAGGGAGAAG 39777496 Query 64 ACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCATTAT 123 || |||||| | ||||||||||||||| || || |||||| | | ||| || Sbjct 39777495 ACTCCTTGGCTCATTGTTCTTATGCATGTGCCAATCTACAATAGCAATGAAGCTCACTAC 39777436 Query 124 ATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTTGAT 183 ||||||||||||| ||| ||| || | |||| | ||||| | | |||||||||||| Sbjct 39777435 ATGGAGGGGGAAAGTATGCGAGCTATATTTGAGAGTTGGTTCATCCATTACAAAGTTGAT 39777376 Query 184 GTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 || || ||||| || ||||| |||||||||||| |||| Sbjct 39777375 GTAGTCTTTGCTGGCCATGTCCATGCTTATGAAAGATC 39777338 Score = 35.6 bits (38), Expect = 2.0 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 109 TACAACTATCATTATATGG 127 ||||||||||||||||||| Sbjct 2669921 TACAACTATCATTATATGG 2669939 Score = 35.6 bits (38), Expect = 2.0 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 146 TAATGTATGAGGGATGGTT 164 ||||||||||||||||||| Sbjct 23093353 TAATGTATGAGGGATGGTT 23093335 Score = 33.7 bits (36), Expect = 7.0 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 187 GTATTTGCAGGTCATGTT 204 |||||||||||||||||| Sbjct 22634221 GTATTTGCAGGTCATGTT 22634204 >Query1 on lcl|Jm4S| Query1 on lcl|Jm4S Length=27577207 Score = 78.8 bits (86), Expect = 2e-13 Identities = 148/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 4 AAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAG 63 ||||| || | ||||| ||||| || | ||| | || ||| | |||| || Sbjct 1014110 AAATATACACTTCAATGGAGGTGGCTGCAAGAAGAACTAAAAAGAGTGGATAGGAGGAAG 1014169 Query 64 ACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTATCATTAT 123 ||||||||| | ||| |||| | ||| ||| || | ||| || || ||| Sbjct 1014170 ACACCTTGGCTTATTATTCTCCTTCATGTACCCATCTACAGTAGTAACTCAGCCCACTAT 1014229 Query 124 ATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTTGAT 183 ||||| || |||| ||| ||| | | |||| |||||||||| || | ||||||| Sbjct 1014230 ATGGAAGGTGAAAGTATGCGAGCTGTCTTTGAGAGATGGTTTGTCTGTTATAGAGTTGAT 1014289 Query 184 GTGGTATTTGCAGGTCATGTTCATGCTTATGAACGATC 221 | |||||||| || || |||||||| |||||| |||| Sbjct 1014290 TTCGTATTTGCTGGGCACGTTCATGCCTATGAAAGATC 1014327 Score = 33.7 bits (36), Expect = 7.0 Identities = 24/28 (86%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 179 TTGATGTGGTATTTGCAGGTCATGTTCA 206 ||||||||||||||| || ||||| || Sbjct 5976283 TTGATGTGGTATTTGAAGTCCATGTGCA 5976256 Score = 33.7 bits (36), Expect = 7.0 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 195 AGGTCATGTTCATGCTTATGA 215 ||||||||||||||||| ||| Sbjct 21661029 AGGTCATGTTCATGCTTGTGA 21661049 >Query1 on lcl|Jm5D| Query1 on lcl|Jm5D Length=35798223 Score = 77.0 bits (84), Expect = 7e-13 Identities = 148/212 (70%), Gaps = 10/212 (5%) Strand=Plus/Minus Query 14 CTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAGACACCTTGGT 73 |||| ||| | |||||||| || ||| | || ||| |||||| | || || ||| Sbjct 1164306 CTCAGTACAAGTGGCTTGAGGCCGATTTGGCCAACGTTGACAGGAAGAAAACGCCATGGA 1164247 Query 74 TGATTGTTCTTATGCATTCCCCCTGGTATAA---TAGCTACAACTATCATTATATGGAGG 130 | |||| || ||||| ||||||||||||| || |||| | ||| | || | Sbjct 1164246 TCTTTGTGCTCTTGCATGCCCCCTGGTATAACTCTAA-TACAGCA--CATCAAGGTGAAG 1164190 Query 131 GGGAAACCATGAGAGTAATGTATG--AGGGATGGTTTGTGAAGTACAAAGTTGATGTGGT 188 | |||| ||||||| || |||| || | || | | | | | || || || ||||| Sbjct 1164189 GAGAAAGCATGAGAA-AAGCTATGGAAGAGTTGCTGTATAAGGCACGG-GTCGACGTGGT 1164132 Query 189 ATTTGCAGGTCATGTTCATGCTTATGAACGAT 220 |||||||| ||||||||||| |||||||||| Sbjct 1164131 TTTTGCAGGCCATGTTCATGCATATGAACGAT 1164100 Score = 68.0 bits (74), Expect = 3e-10 Identities = 143/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 13 CCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACTGAGACACCTTGG 72 ||||| ||| ||||||| || || ||| | |||| || |||| |||| || ||| Sbjct 1175336 CCTCAGTACAAATGGCTGGAGTCTGATTTGGCTCAAGTCAATAGGAAGAAGACCCCCTGG 1175277 Query 73 TTGATTGTTCTTATGCATTCCCCCTGGTATAATAGCTACAACTA-TCATTATATGGAGGG 131 | ||||||| ||||| | || |||||||||| ||| || |||| | || || Sbjct 1175276 GTTCTTGTTCTGTTGCATGCGCCTTGGTATAATA-CTAATACAGCTCATCAAGGCGAAGG 1175218 Query 132 GGAAACCATGAGAGTAATGTATGAGG-GATGGTTTGTGAAGTACAAAGTTGATGTGGTAT 190 || | ||||||| || ||| | || | | | | | || || |||||||| | Sbjct 1175217 AGACAGCATGAGACAAACAATGGAGAAGCTGTTGTATAAGGCACGG-GTCGATGTGGTTT 1175159 Query 191 TTGCAGGTCATGTTCATGCTTATGAACG 218 |||| || ||||||||||| |||||||| Sbjct 1175158 TTGCTGGACATGTTCATGCATATGAACG 1175131 Score = 33.7 bits (36), Expect = 7.0 Identities = 24/28 (86%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 164 TTGTGAAGTACAAAGTTGATGTGGTATT 191 |||| | ||||| |||||||||||||| Sbjct 7358440 TTGTATATTACAATGTTGATGTGGTATT 7358413 Score = 33.7 bits (36), Expect = 7.0 Identities = 23/26 (88%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 143 GAGTAATGTATGAGGGATGGTTTGTG 168 || ||| |||||||||||| |||||| Sbjct 31566265 GATTAAGGTATGAGGGATGTTTTGTG 31566240 >Query1 on lcl|Jm6D| Query1 on lcl|Jm6D Length=38364907 Score = 50.0 bits (54), Expect = 9e-05 Identities = 38/45 (84%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 174 CAAAGTTGATGTGGTATTTGCAGGTCATGTTCATGCTTATGAACG 218 ||| || ||| | ||| |||| ||||||||||||||||| ||||| Sbjct 36510532 CAATGTGGATATAGTACTTGCTGGTCATGTTCATGCTTACGAACG 36510488 Score = 37.4 bits (40), Expect = 0.58 Identities = 49/68 (72%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 46 AAAGTTAACAGGACTGAGACACCTTGGTTGATTGTTCTTATGCATTCCCCCTGGTATAAT 105 ||||| || ||| ||||||||||| |||| || || | ||| || |||||||| Sbjct 36510660 AAAGTGGACCGGAAAAAGACACCTTGGCTGATCGTGCTATTCCATGTTCCTTGGTATAAC 36510601 Query 106 AGCTACAA 113 || |||| Sbjct 36510600 AGTAACAA 36510593 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 187 GTATTTGCAGGTCATGTTCATGC 209 |||||| |||||||||||| ||| Sbjct 12479240 GTATTTTCAGGTCATGTTCGTGC 12479218 >Query1 on lcl|Jm1D| Query1 on lcl|Jm1D Length=49856174 Score = 39.2 bits (42), Expect = 0.17 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 30 TGAACAGGAATTGCCAAAAGTTAA 53 ||| |||||||||||||||||||| Sbjct 49733123 TGATCAGGAATTGCCAAAAGTTAA 49733146 Score = 33.7 bits (36), Expect = 7.0 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 104 ATAGCTACAACTATCATT 121 |||||||||||||||||| Sbjct 21869684 ATAGCTACAACTATCATT 21869701 >Query1 on lcl|Jm2S| Query1 on lcl|Jm2S Length=34707362 Score = 35.6 bits (38), Expect = 2.0 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 70 TGGTTGATTGTTCTTATGC 88 ||||||||||||||||||| Sbjct 16409854 TGGTTGATTGTTCTTATGC 16409836 Score = 35.6 bits (38), Expect = 2.0 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 66 ACCTTGGTTGATTGTTCTTATG 87 ||||||||||||||||| |||| Sbjct 25798258 ACCTTGGTTGATTGTTCATATG 25798279 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 132 GGAAACCATGAGAGTAATGTATG 154 ||||||||||| | ||||||||| Sbjct 14712989 GGAAACCATGAAAATAATGTATG 14713011 Score = 33.7 bits (36), Expect = 7.0 Identities = 36/45 (80%), Gaps = 2/45 (4%) Strand=Plus/Plus Query 122 ATATGGAGGGGGAAACCATGAGAGT-AATGTATGAGGGATGGTTT 165 ||||||||||||||| ||||| ||| ||| | | || || |||| Sbjct 34035480 ATATGGAGGGGGAAA-CATGAAAGTGCATGCAAGTGGAATCGTTT 34035523 >Query1 on lcl|Jm8D| Query1 on lcl|Jm8D Length=36225362 Score = 33.7 bits (36), Expect = 7.0 Identities = 25/27 (93%), Gaps = 2/27 (7%) Strand=Plus/Plus Query 167 TGAAGT-ACAAAGTTGATGTGGTATTT 192 |||||| ||||| |||||||||||||| Sbjct 301654 TGAAGTTACAAA-TTGATGTGGTATTT 301679 Score = 33.7 bits (36), Expect = 7.0 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 66 ACCTTGGTTGATTGTTCTTAT 86 ||||||||||||||||| ||| Sbjct 6920880 ACCTTGGTTGATTGTTCGTAT 6920860 >Query1 on lcl|Jm7D| Query1 on lcl|Jm7D Length=26765518 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 147 AATGTATGAGGGATGGTTTGTGA 169 |||| ||||| |||||||||||| Sbjct 19832684 AATGAATGAGAGATGGTTTGTGA 19832662 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 147 AATGTATGAGGGATGGTTTGTGA 169 |||| ||||| |||||||||||| Sbjct 19847232 AATGAATGAGAGATGGTTTGTGA 19847210 Score = 33.7 bits (36), Expect = 7.0 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 74 TGATTGTTCTTATGCATT 91 |||||||||||||||||| Sbjct 26271505 TGATTGTTCTTATGCATT 26271488 >Query1 on lcl|Jm6S| Query1 on lcl|Jm6S Length=22373256 Score = 33.7 bits (36), Expect = 7.0 Identities = 23/25 (92%), Gaps = 1/25 (4%) Strand=Plus/Plus Query 66 ACCTTGGTTGATTGTTCTTATGCAT 90 |||||||||||||||| ||| |||| Sbjct 1733353 ACCTTGGTTGATTGTTGTTA-GCAT 1733376 >Query1 on lcl|Jm5S| Query1 on lcl|Jm5S Length=32113326 Score = 33.7 bits (36), Expect = 7.0 Identities = 26/30 (87%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 148 ATGTATGAGGGATGGTTTGTGAAGTACAAA 177 ||| ||||||||||| |||||| || |||| Sbjct 12260757 ATGCATGAGGGATGG-TTGTGATGTGCAAA 12260729 >Query1 on lcl|Jm1S| Query1 on lcl|Jm1S Length=30169828 Score = 33.7 bits (36), Expect = 7.0 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 148 ATGTATGAGGGATGGTTTGTGAA 170 ||||||| | ||||||||||||| Sbjct 16421598 ATGTATGTGAGATGGTTTGTGAA 16421620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101355127872 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2