BLAST Results |AT1G07640.3|AT1G21340.1|AT1G26790.1|AT1G28310.2|AT1G29160.1|AT1G47655.1|AT1G51700.1|AT1G64620.1|AT1G69570.1|AT2G28510.1|AT2G28810.1|AT2G34140.1|AT2G37590.1|AT2G46590.2|AT3G21270.1|AT3G45610.1|AT3G47500.1|AT3G50410.1|AT3G52440.1|AT3G55370.3|AT3G61850.4|AT4G00940.1|AT4G21030.1|AT4G21040.1|AT4G21050.1|AT4G21080.1|AT4G24060.1|AT4G38000.1|AT5G02460.1|AT5G39660.1|AT5G60200.1|AT5G60850.1|AT5G62430.1|AT5G62940.1|AT5G65590.1|AT5G66940.1|
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa 73 sequences; 534,671,929 total letters Query= AT1G07640.3 | Symbols:OBP2,URP3 | UAS-TAGGED ROOT PATTERNING3 | Chr1:2354707-2356012 REVERSE LENGTH=339 Length=339 ***** No hits found ***** Lambda K H 1.09 0.487 1.68 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165747641720 Query= AT1G21340.1 | Symbols:no symbol available | no full name available | Chr1:7476087-7476869 FORWARD LENGTH=260 Length=260 ***** No hits found ***** Lambda K H 1.15 0.493 1.80 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123508726572 Query= AT1G26790.1 | Symbols:no symbol available | no full name available | Chr1:9273857-9275104 REVERSE LENGTH=372 Length=372 ***** No hits found ***** Lambda K H 1.30 0.506 2.09 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182857050738 Query= AT1G28310.2 | Symbols:no symbol available | no full name available | Chr1:9912534-9913715 REVERSE LENGTH=335 Length=335 ***** No hits found ***** Lambda K H 1.23 0.502 1.96 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163608962472 Query= AT1G29160.1 | Symbols:COG1 | Cogwheel1 | Chr1:10183797-10184324 REVERSE LENGTH=175 Length=175 ***** No hits found ***** Lambda K H 1.01 0.477 1.52 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78596473095 Query= AT1G47655.1 | Symbols:no symbol available | no full name available | Chr1:17525437-17526066 FORWARD LENGTH=209 Length=209 ***** No hits found ***** Lambda K H 1.03 0.482 1.57 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96240566160 Query= AT1G51700.1 | Symbols:DOF1,ADOF1 | DOF zinc finger protein 1 | Chr1:19174266-19174850 FORWARD LENGTH=194 Length=194 ***** No hits found ***** Lambda K H 1.18 0.498 1.86 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 88220518980 Query= AT1G64620.1 | Symbols:DOF1.8 | | Chr1:24007288-24008460 FORWARD LENGTH=352 Length=352 ***** No hits found ***** Lambda K H 1.17 0.496 1.84 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172698349276 Query= AT1G69570.1 | Symbols:no symbol available | no full name available | Chr1:26161771-26163230 REVERSE LENGTH=399 Length=399 ***** No hits found ***** Lambda K H 1.21 0.500 1.92 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197293133691 Query= AT2G28510.1 | Symbols:no symbol available | no full name available | Chr2:12199383-12200627 REVERSE LENGTH=288 Length=288 ***** No hits found ***** Lambda K H 1.13 0.493 1.77 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138479481308 Query= AT2G28810.1 | Symbols:no symbol available | no full name available | Chr2:12363681-12365080 FORWARD LENGTH=340 Length=340 ***** No hits found ***** Lambda K H 1.09 0.485 1.67 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166282311532 Query= AT2G34140.1 | Symbols:CDF4 | CYCLING DOF FACTOR 4 | Chr2:14414188-14414700 REVERSE LENGTH=170 Length=170 ***** No hits found ***** Lambda K H 1.08 0.485 1.65 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 75923123670 Query= AT2G37590.1 | Symbols:ATDOF2.4,DOF2.4 | DNA binding with one finger 2.4 | Chr2:15769292-15770497 FORWARD LENGTH=330 Length=330 ***** No hits found ***** Lambda K H 1.10 0.490 1.71 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160935613412 Query= AT2G46590.2 | Symbols:DAG2 | DOF AFFECTING GERMINATION 2 | Chr2:19133166-19134905 FORWARD LENGTH=369 Length=369 ***** No hits found ***** Lambda K H 1.25 0.501 1.99 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181253041521 Query= AT3G21270.1 | Symbols:DOF2,ADOF2 | DOF zinc finger protein 2 | Chr3:7474934-7475548 FORWARD LENGTH=204 Length=204 ***** No hits found ***** Lambda K H 1.14 0.494 1.78 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93567217100 Query= AT3G45610.1 | Symbols:DOF6 | DOF transcription factor 6 | Chr3:16739530-16740352 REVERSE LENGTH=245 Length=245 ***** No hits found ***** Lambda K H 1.11 0.491 1.73 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115488679392 Query= AT3G47500.1 | Symbols:CDF3 | cycling DOF factor 3 | Chr3:17504276-17505964 REVERSE LENGTH=448 Length=448 ***** No hits found ***** Lambda K H 1.16 0.493 1.81 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 223491950902 Query= AT3G50410.1 | Symbols:OBP1 | OBF binding protein 1 | Chr3:18709872-18710633 FORWARD LENGTH=253 Length=253 ***** No hits found ***** Lambda K H 1.02 0.478 1.55 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119766037888 Query= AT3G52440.1 | Symbols:no symbol available | no full name available | Chr3:19435447-19436190 FORWARD LENGTH=247 Length=247 ***** No hits found ***** Lambda K H 1.10 0.484 1.68 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116558019016 Query= AT3G55370.3 | Symbols:OBP3 | OBF-binding protein 3 | Chr3:20527198-20528876 FORWARD LENGTH=368 Length=368 ***** No hits found ***** Lambda K H 1.16 0.495 1.81 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180718371782 Query= AT3G61850.4 | Symbols:DAG1 | dof affecting germination 1 | Chr3:22895495-22897150 FORWARD LENGTH=324 Length=324 ***** No hits found ***** Lambda K H 1.19 0.498 1.87 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157727594540 Query= AT4G00940.1 | Symbols:DOF4.1,AtDOF4.1,ITD1 | DNA binding with one finger 4.1,INTERCELLULAR TRAFFICKING DOF 1 | Chr4:403320-404204 REVERSE LENGTH=294 Length=294 ***** No hits found ***** Lambda K H 1.22 0.498 1.92 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141687500180 Query= AT4G21030.1 | Symbols:ATDOF4.2,ATDOF4;2 | | Chr4:11231414-11231998 FORWARD LENGTH=194 Length=194 ***** No hits found ***** Lambda K H 1.34 0.504 2.15 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 88220518980 Query= AT4G21040.1 | Symbols:DOF4.3,AtDOF4.3 | DNA-binding with One Finger 4.3 | Chr4:11234807-11235505 REVERSE LENGTH=232 Length=232 ***** No hits found ***** Lambda K H 1.24 0.496 1.94 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108537971836 Query= AT4G21050.1 | Symbols:AtDOF4.4,DOF4.4 | DNA-binding with One Finger 4.4 | Chr4:11238441-11239073 FORWARD LENGTH=210 Length=210 ***** No hits found ***** Lambda K H 1.27 0.500 2.01 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96775235972 Query= AT4G21080.1 | Symbols:DOF4.5,AtDOF4.5 | DNA-binding with One Finger 4.5 | Chr4:11254602-11255351 REVERSE LENGTH=249 Length=249 ***** No hits found ***** Lambda K H 1.26 0.498 1.99 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117627358640 Query= AT4G24060.1 | Symbols:no symbol available | no full name available | Chr4:12503970-12505417 FORWARD LENGTH=342 Length=342 ***** No hits found ***** Lambda K H 1.11 0.488 1.72 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167351651156 Query= AT4G38000.1 | Symbols:DOF4.7 | DNA binding with one finger 4.7 | Chr4:17858436-17859176 FORWARD LENGTH=246 Length=246 ***** No hits found ***** Lambda K H 1.16 0.495 1.82 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116023349204 Query= AT5G02460.1 | Symbols:no symbol available | no full name available | Chr5:539549-541058 REVERSE LENGTH=399 Length=399 ***** No hits found ***** Lambda K H 1.06 0.485 1.63 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197293133691 Query= AT5G39660.1 | Symbols:CDF2 | cycling DOF factor 2 | Chr5:15878920-15880712 FORWARD LENGTH=457 Length=457 ***** No hits found ***** Lambda K H 1.08 0.486 1.66 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228303978553 Query= AT5G60200.1 | Symbols:TMO6 | TARGET OF MONOPTEROS 6 | Chr5:24241078-24241951 FORWARD LENGTH=257 Length=257 ***** No hits found ***** Lambda K H 1.10 0.490 1.71 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121904717136 Query= AT5G60850.1 | Symbols:AtDOF5.4,OBP4 | OBF binding protein 4 | Chr5:24480578-24481501 FORWARD LENGTH=307 Length=307 ***** No hits found ***** Lambda K H 1.06 0.482 1.63 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148638207736 Query= AT5G62430.1 | Symbols:CDF1 | cycling DOF factor 1 | Chr5:25069298-25070787 REVERSE LENGTH=298 Length=298 ***** No hits found ***** Lambda K H 1.22 0.499 1.92 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143826179428 Query= AT5G62940.1 | Symbols:DOF5.6,HCA2 | DNA BINDING WITH ONE FINGER 5.6,HIGH CAMBIAL ACTIVITY2 | Chr5:25257183-25258504 REVERSE LENGTH=372 Length=372 ***** No hits found ***** Lambda K H 1.11 0.488 1.72 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182857050738 Query= AT5G65590.1 | Symbols:SCAP1 | STOMATAL CARPENTER 1 | Chr5:26212084-26213034 REVERSE LENGTH=316 Length=316 ***** No hits found ***** Lambda K H 1.19 0.498 1.88 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153450236044 Query= AT5G66940.1 | Symbols:ATDOF5.8 | | Chr5:26727989-26728666 REVERSE LENGTH=225 Length=225 ***** No hits found ***** Lambda K H 1.05 0.484 1.62 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104795283152 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2