BLAST Results |AT1G14410.1|AT1G71260.1|AT2G02740.1|
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: ./data/162513278444.blastagainst.txt 3 sequences; 3,569 total letters Query= AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score E Sequences producing significant alignments: (Bits) Value AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY... 2693 0.0 AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRL... 728 0.0 > AT1G14410.1 on AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score = 2693 bits (2986), Expect = 0.0 Identities = 1493/1493 (100%), Gaps = 0/1493 (0%) Strand=Plus/Plus Query 1 CTTCTCTAAGGAGAAGAGATATTATCTCTTACTCTGTTTCTTCTTTCTCTCAATATTCCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCTCTAAGGAGAAGAGATATTATCTCTTACTCTGTTTCTTCTTTCTCTCAATATTCCA 60 Query 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAATAAAGCTGTAGAAACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAATAAAGCTGTAGAAACG 120 Query 121 AATTAACGAAAAGTTATCACTTTCTTTGTCTCGTCATCTCTCTCGAGTCTCGAGTCTCTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AATTAACGAAAAGTTATCACTTTCTTTGTCTCGTCATCTCTCTCGAGTCTCGAGTCTCTG 180 Query 181 AGTGTGTAAAGGAAGCGCCTTTTTCTCTCCTCCATCGTAATTCGCAGAGAAGACACACTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGTGTGTAAAGGAAGCGCCTTTTTCTCTCCTCCATCGTAATTCGCAGAGAAGACACACTA 240 Query 241 CATTGACTGAGAGGGAACAAACACAAAGCGATGTCGCAACTCTTATCGACTCCTCTAATG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CATTGACTGAGAGGGAACAAACACAAAGCGATGTCGCAACTCTTATCGACTCCTCTAATG 300 Query 301 GCGGTCAACTCCAATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCGGTCAACTCCAATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTT 360 Query 361 GCAGTGAAACGGCATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GCAGTGAAACGGCATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCG 420 Query 421 GTTAAGTCTCGCCAGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTAAGTCTCGCCAGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCT 480 Query 481 CCTTCACCTGCTGAAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CCTTCACCTGCTGAAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGG 540 Query 541 AAAGCTGCGTTAACAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AAAGCTGCGTTAACAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCT 600 Query 601 TTCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TTCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGA 660 Query 661 CAATATGATTGGAGCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 CAATATGATTGGAGCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTA 720 Query 721 GTTAGCCTAGGCCCGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAAAGT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 GTTAGCCTAGGCCCGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAAAGT 780 Query 781 GATGAGGGAAAAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GATGAGGGAAAAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCAT 840 Query 841 TTCTTCAACCTAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTCTTCAACCTAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCA 900 Query 901 ATTACTCGAGCAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 ATTACTCGAGCAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTT 960 Query 961 ATAGGCTGGCATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAAC 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ATAGGCTGGCATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAAC 1020 Query 1021 GCTTCGCCTAACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAGGGCCATAA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GCTTCGCCTAACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAGGGCCATAA 1080 Query 1081 CAGGAACATATATCAGAGATCATCCTACCCTTTTTGTTTTGCTGATAGGTTTCGTCAGGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CAGGAACATATATCAGAGATCATCCTACCCTTTTTGTTTTGCTGATAGGTTTCGTCAGGA 1140 Query 1141 TTGATATATGTTCGTAGGTAGCAGAAGAGACTAAAAGTAGTTTATTTTTTCGTCCTTTTG 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TTGATATATGTTCGTAGGTAGCAGAAGAGACTAAAAGTAGTTTATTTTTTCGTCCTTTTG 1200 Query 1201 ACCAAATGTTCAAAAGCCACATATCATTTCGTGGTAAGCGGTTGTATCTCAAAACATCAG 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 ACCAAATGTTCAAAAGCCACATATCATTTCGTGGTAAGCGGTTGTATCTCAAAACATCAG 1260 Query 1261 TCTGATCTTAGTTGTTTTTGATTTAAGAGCAAATCTCAATTTGAAGTCTGAGTACGAGCT 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 TCTGATCTTAGTTGTTTTTGATTTAAGAGCAAATCTCAATTTGAAGTCTGAGTACGAGCT 1320 Query 1321 AGTATGATCCAAATGCCTAGGCTTTGAGACGAGGCTTGAAGATGAATTGGTTTGTCTAGA 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 AGTATGATCCAAATGCCTAGGCTTTGAGACGAGGCTTGAAGATGAATTGGTTTGTCTAGA 1380 Query 1381 GAGATTGGAGAAACAAGACATACCACAAAAACATTTCTCTCTAGTAACAAAAACATCACT 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 GAGATTGGAGAAACAAGACATACCACAAAAACATTTCTCTCTAGTAACAAAAACATCACT 1440 Query 1441 CTACTCTACTCTTGTGGTTTGGGTCTGGATTTTAGTCCGGTTAGTGGTACAAT 1493 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 CTACTCTACTCTTGTGGTTTGGGTCTGGATTTTAGTCCGGTTAGTGGTACAAT 1493 Score = 22.9 bits (24), Expect = 0.65 Identities = 12/12 (100%), Gaps = 0/12 (0%) Strand=Plus/Minus Query 1142 TGATATATGTTC 1153 |||||||||||| Sbjct 1095 TGATATATGTTC 1084 Score = 22.9 bits (24), Expect = 0.65 Identities = 12/12 (100%), Gaps = 0/12 (0%) Strand=Plus/Minus Query 1084 GAACATATATCA 1095 |||||||||||| Sbjct 1153 GAACATATATCA 1142 > AT1G14410.1 on AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score = 728 bits (806), Expect = 0.0 Identities = 623/762 (82%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 314 ATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTTGCAGTGAAACGGC 373 || |||| ||||||||||| ||| | ||| | |||| || || || | ||| Sbjct 126 ATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAAA---- 181 Query 374 ATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCGGTTAAGTCTCGCC 433 || |||| | || ||||||||| ||| | |||| || |||| |||||||| | Sbjct 182 ATT-ATTC-CTTTAAAACCGACGGCGAGGT---TGAAA---TTAACGGTGAAGTCTCGAC 233 Query 434 AGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCTCCTTCACCTGCTG 493 | | |||||||| ||||| |||||||| |||||||| |||||||| | || |||| Sbjct 234 AAAGTGATTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAA-AC--GCTG 290 Query 494 AAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAA 553 ||| || || ||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct 291 AAGTATCTTCTCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTA 350 Query 554 CAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCTTTCAAGTTGTCAA 613 | | || ||| |||||||||||||||||||||| || ||||| || |||||| || ||| Sbjct 351 CGATAGAACCACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAA 410 Query 614 AAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGACAATATGATTGGA 673 | || ||||| || |||||||| ||||||||| | |||||||| || ||||||||||||| Sbjct 411 AGGAAGGTTTTTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGA 470 Query 674 GCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCC 733 | | ||| ||||| ||||| ||||| ||||||||||| || | |||||||||||| || | Sbjct 471 GTAGGAAGCAGGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGC 530 Query 734 CGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAA---AGTGATGAGGGAA 790 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | Sbjct 531 CGAGGGAATCATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTA 590 Query 791 AAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCATTTCTTCAACC 850 |||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||| Sbjct 591 AAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACC 650 Query 851 TAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCAATTACTCGAG 910 | ||||||||||||||||| ||||||| |||||||| | ||||||||||| ||| || Sbjct 651 TGAGTGTTCAAAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAG 710 Query 911 CAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTTATAGGCTGGC 970 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct 711 CAGAGTTTGCTGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGA 770 Query 971 ATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAACGCTTCGCCTA 1030 ||||||||| |||||||||||||||||||| | | ||| | ||||| |||||||||| Sbjct 771 GTGCATTTGCTAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTA 830 Query 1031 ACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAG 1072 | |||||||||||||| ||||||| ||||||||| | |||| Sbjct 831 AGTATGGAGGAGACTACGAATGGAGTAGATGATGGAGATTAG 872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5200517 Query= AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-26863454 REVERSE LENGTH=972 Length=972 Score E Sequences producing significant alignments: (Bits) Value AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-... 1754 0.0 AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRL... 33.7 2e-04 > AT1G71260.1 on AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-26863454 REVERSE LENGTH=972 Length=972 Score = 1754 bits (1944), Expect = 0.0 Identities = 972/972 (100%), Gaps = 0/972 (0%) Strand=Plus/Plus Query 1 AAATCATAAAACCTCAGAAGTCGGAAGACCTCAAGTGATGCTTTTTACTCGAGACAGAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AAATCATAAAACCTCAGAAGTCGGAAGACCTCAAGTGATGCTTTTTACTCGAGACAGAAG 60 Query 61 AAGATGATGAAGCAAGCCCGCTCTTTGCTCTCCAGGAGCCTTTGTGACCAAAGTAAGTCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGATGATGAAGCAAGCCCGCTCTTTGCTCTCCAGGAGCCTTTGTGACCAAAGTAAGTCA 120 Query 121 CTTTTCGAAGCTTCGACGTTGCGTGGTTTTGCAAGCTGGTCAAATTCTTCAACCCCTGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTTTCGAAGCTTCGACGTTGCGTGGTTTTGCAAGCTGGTCAAATTCTTCAACCCCTGGA 180 Query 181 CGTGGATTCCCTGGTAAAGATGCCGCAAAGCCTAGTGGTCGATTGTTCGCACCTTATTCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGTGGATTCCCTGGTAAAGATGCCGCAAAGCCTAGTGGTCGATTGTTCGCACCTTATTCT 240 Query 241 ATCTTCAAAGGAAAAGCTGCTCTCTCTGTTGAACCTGTTCTTCCCAGTTTCACTGAAATC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ATCTTCAAAGGAAAAGCTGCTCTCTCTGTTGAACCTGTTCTTCCCAGTTTCACTGAAATC 300 Query 301 GATTCGGGAAATCTTCGGATAGATCGTCGTGGATCCTTAATGATGACTTTTATGCCTGCT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GATTCGGGAAATCTTCGGATAGATCGTCGTGGATCCTTAATGATGACTTTTATGCCTGCT 360 Query 361 ATTGGTGAGCGTAAGTACGACTGGGAAAAGAAACAGAAATTTGCTTTGTCACCTACTGAA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATTGGTGAGCGTAAGTACGACTGGGAAAAGAAACAGAAATTTGCTTTGTCACCTACTGAA 420 Query 421 GTTGGATCCTTAATTAGCATGGGTTCCAAAGACAGCTCCGAGTTTTTCCATGACCCTTCC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTGGATCCTTAATTAGCATGGGTTCCAAAGACAGCTCCGAGTTTTTCCATGACCCTTCC 480 Query 481 ATGAAATCAAGTAATGCTGGTCAAGTCAGGAAGTCACTGTCAGTTAAGCCCCACGCAGAT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATGAAATCAAGTAATGCTGGTCAAGTCAGGAAGTCACTGTCAGTTAAGCCCCACGCAGAT 540 Query 541 GGTAGCGGCTACTTCATCTCATTGAGCGTTAACAATAGCATCCTCAAAACCAATGACTAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GGTAGCGGCTACTTCATCTCATTGAGCGTTAACAATAGCATCCTCAAAACCAATGACTAT 600 Query 601 TTTGTGGTTCCTGTCACAAAAGCTGAATTTGCAGTGATGAAGACAGCTTTTAGTTTTGCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TTTGTGGTTCCTGTCACAAAAGCTGAATTTGCAGTGATGAAGACAGCTTTTAGTTTTGCT 660 Query 661 CTTCCACACATCATGGGTTGGAATCGGTTAACTGGTCACGTTAATACTGAAGCTCTGCCG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 CTTCCACACATCATGGGTTGGAATCGGTTAACTGGTCACGTTAATACTGAAGCTCTGCCG 720 Query 721 TCGAGGAATGTTTCTCATCTAAAGACTGAACCACAGTTAGAGCTGGAGTGGGATAAATGA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TCGAGGAATGTTTCTCATCTAAAGACTGAACCACAGTTAGAGCTGGAGTGGGATAAATGA 780 Query 781 AATGATGAGAGTAGTAGGAACGGAGTAAATTGAAAATGCATGTGTTCTTTTTTCTGGCAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AATGATGAGAGTAGTAGGAACGGAGTAAATTGAAAATGCATGTGTTCTTTTTTCTGGCAT 840 Query 841 TTGGTGCACACGAAACTCGGCATGCTCTGTTTTGAAACTAATATGTCCTCTCTAAGACTT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTGGTGCACACGAAACTCGGCATGCTCTGTTTTGAAACTAATATGTCCTCTCTAAGACTT 900 Query 901 CTAAATCATGGGTCTTCTTGTTTTCATTAGCACATATGTTATTTAGTACAAGCATTTTGG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CTAAATCATGGGTCTTCTTGTTTTCATTAGCACATATGTTATTTAGTACAAGCATTTTGG 960 Query 961 TTTCAACTTGAT 972 |||||||||||| Sbjct 961 TTTCAACTTGAT 972 Score = 22.9 bits (24), Expect = 0.42 Identities = 12/12 (100%), Gaps = 0/12 (0%) Strand=Plus/Minus Query 125 TCGAAGCTTCGA 136 |||||||||||| Sbjct 136 TCGAAGCTTCGA 125 Score = 22.9 bits (24), Expect = 0.42 Identities = 12/12 (100%), Gaps = 0/12 (0%) Strand=Plus/Plus Query 423 TGGATCCTTAAT 434 |||||||||||| Sbjct 330 TGGATCCTTAAT 341 Score = 22.9 bits (24), Expect = 0.42 Identities = 12/12 (100%), Gaps = 0/12 (0%) Strand=Plus/Plus Query 330 TGGATCCTTAAT 341 |||||||||||| Sbjct 423 TGGATCCTTAAT 434 > AT1G71260.1 on AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score = 33.7 bits (36), Expect = 2e-04 Identities = 24/28 (86%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 236 ATTCTATCTTCAAAGGAAAAGCTGCTCT 263 |||| || | |||||| ||||||||||| Sbjct 321 ATTCGATTTACAAAGGGAAAGCTGCTCT 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3366076 Query= AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score E Sequences producing significant alignments: (Bits) Value AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRL... 1992 0.0 AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY... 728 0.0 AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-... 33.7 3e-04 > AT2G02740.1 on AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score = 1992 bits (2208), Expect = 0.0 Identities = 1104/1104 (100%), Gaps = 0/1104 (0%) Strand=Plus/Plus Query 1 ATCGTAATCCCGCGGTGAAGAAGACGAAGAAGCATTGAGAGTGAAAAGAAAAACAATGTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCGTAATCCCGCGGTGAAGAAGACGAAGAAGCATTGAGAGTGAAAAGAAAAACAATGTC 60 Query 61 GCAGCTGTTATCTTCTCCTCCAATGGCGGTTTTCTCCAAAACCTTCATAAACCATAAGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCAGCTGTTATCTTCTCCTCCAATGGCGGTTTTCTCCAAAACCTTCATAAACCATAAGTT 120 Query 121 TTCAGATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTCAGATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAA 180 Query 181 AATTATTCCTTTAAAACCGACGGCGAGGTTGAAATTAACGGTGAAGTCTCGACAAAGTGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AATTATTCCTTTAAAACCGACGGCGAGGTTGAAATTAACGGTGAAGTCTCGACAAAGTGA 240 Query 241 TTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAAACGCTGAAGTATCTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAAACGCTGAAGTATCTTC 300 Query 301 TCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTACGATAGAACC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTACGATAGAACC 360 Query 361 ACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAAAGGAAGGTTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAAAGGAAGGTTT 420 Query 421 TTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGGAAGCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGGAAGCA 480 Query 481 GGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAATC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAATC 540 Query 541 ATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTAAAGTGAGGAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 ATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTAAAGTGAGGAA 600 Query 601 AGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACCTGAGTGTTCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACCTGAGTGTTCA 660 Query 661 AAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAGCAGAGTTTGC 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAGCAGAGTTTGC 720 Query 721 TGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGAGTGCATTTGC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGAGTGCATTTGC 780 Query 781 TAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTAAGTATGGAGG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 TAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTAAGTATGGAGG 840 Query 841 AGACTACGAATGGAGTAGATGATGGAGATTAGAGGCAATCTTGCAAACTCGGTTTTTCGG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 AGACTACGAATGGAGTAGATGATGGAGATTAGAGGCAATCTTGCAAACTCGGTTTTTCGG 900 Query 901 TCCATACCATCTTTTTGTTGTTGCAAATCAATGAGTCACCAAGAGCTGTTCGAGATAGAG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TCCATACCATCTTTTTGTTGTTGCAAATCAATGAGTCACCAAGAGCTGTTCGAGATAGAG 960 Query 961 AACGGAAAGAAAAGCAGCAGCAGAGACTGAAGTAGTTTAGACCAAATGGAATGTGTTGTT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AACGGAAAGAAAAGCAGCAGCAGAGACTGAAGTAGTTTAGACCAAATGGAATGTGTTGTT 1020 Query 1021 GTGTAGGAAATAACTTATATTTTGTGTTAGACAATCTGTATTCATTCAAAAGCAATCAAT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GTGTAGGAAATAACTTATATTTTGTGTTAGACAATCTGTATTCATTCAAAAGCAATCAAT 1080 Query 1081 TACAATTTTGCTAATACAAGAATC 1104 |||||||||||||||||||||||| Sbjct 1081 TACAATTTTGCTAATACAAGAATC 1104 Score = 21.1 bits (22), Expect = 1.7 Identities = 11/11 (100%), Gaps = 0/11 (0%) Strand=Plus/Minus Query 269 TCGTCTTCTTC 279 ||||||||||| Sbjct 27 TCGTCTTCTTC 17 Score = 21.1 bits (22), Expect = 1.7 Identities = 11/11 (100%), Gaps = 0/11 (0%) Strand=Plus/Plus Query 294 TATCTTCTCCT 304 ||||||||||| Sbjct 69 TATCTTCTCCT 79 Score = 21.1 bits (22), Expect = 1.7 Identities = 11/11 (100%), Gaps = 0/11 (0%) Strand=Plus/Minus Query 17 GAAGAAGACGA 27 ||||||||||| Sbjct 279 GAAGAAGACGA 269 Score = 21.1 bits (22), Expect = 1.7 Identities = 11/11 (100%), Gaps = 0/11 (0%) Strand=Plus/Plus Query 69 TATCTTCTCCT 79 ||||||||||| Sbjct 294 TATCTTCTCCT 304 > AT2G02740.1 on AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score = 728 bits (806), Expect = 0.0 Identities = 623/762 (82%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 126 ATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAAA---- 181 || |||| ||||||||||| ||| | ||| | |||| || || || | ||| Sbjct 314 ATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTTGCAGTGAAACGGC 373 Query 182 ATT-ATTC-CTTTAAAACCGACGGCGAGGT---TGAAA---TTAACGGTGAAGTCTCGAC 233 || |||| | || ||||||||| ||| | |||| || |||| |||||||| | Sbjct 374 ATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCGGTTAAGTCTCGCC 433 Query 234 AAAGTGATTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAA-AC--GCTG 290 | | |||||||| ||||| |||||||| |||||||| |||||||| | || |||| Sbjct 434 AGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCTCCTTCACCTGCTG 493 Query 291 AAGTATCTTCTCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTA 350 ||| || || ||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct 494 AAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAA 553 Query 351 CGATAGAACCACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAA 410 | | || ||| |||||||||||||||||||||| || ||||| || |||||| || ||| Sbjct 554 CAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCTTTCAAGTTGTCAA 613 Query 411 AGGAAGGTTTTTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGA 470 | || ||||| || |||||||| ||||||||| | |||||||| || ||||||||||||| Sbjct 614 AAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGACAATATGATTGGA 673 Query 471 GTAGGAAGCAGGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGC 530 | | ||| ||||| ||||| ||||| ||||||||||| || | |||||||||||| || | Sbjct 674 GCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCC 733 Query 531 CGAGGGAATCATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTA 590 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | Sbjct 734 CGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAA---AGTGATGAGGGAA 790 Query 591 AAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACC 650 |||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||| Sbjct 791 AAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCATTTCTTCAACC 850 Query 651 TGAGTGTTCAAAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAG 710 | ||||||||||||||||| ||||||| |||||||| | ||||||||||| ||| || Sbjct 851 TAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCAATTACTCGAG 910 Query 711 CAGAGTTTGCTGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGA 770 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct 911 CAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTTATAGGCTGGC 970 Query 771 GTGCATTTGCTAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTA 830 ||||||||| |||||||||||||||||||| | | ||| | ||||| |||||||||| Sbjct 971 ATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAACGCTTCGCCTA 1030 Query 831 AGTATGGAGGAGACTACGAATGGAGTAGATGATGGAGATTAG 872 | |||||||||||||| ||||||| ||||||||| | |||| Sbjct 1031 ACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAG 1072 > AT2G02740.1 on AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-26863454 REVERSE LENGTH=972 Length=972 Score = 33.7 bits (36), Expect = 3e-04 Identities = 24/28 (86%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 321 ATTCGATTTACAAAGGGAAAGCTGCTCT 348 |||| || | |||||| ||||||||||| Sbjct 236 ATTCTATCTTCAAAGGAAAAGCTGCTCT 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3830848 Database: ./data/162513278444.blastagainst.txt Posted date: Jul 1, 2021 2:46 AM Number of letters in database: 3,569 Number of sequences in database: 3 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2