BLAST Results |AT1G14410.1|AT1G71260.1|AT2G02740.1|
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: ./data/162571409133.blastagainst.txt; Jm3101_genome.fa 157 sequences; 527,899,326 total letters Query= AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score E Sequences producing significant alignments: (Bits) Value AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY... 2693 0.0 AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRL... 728 0.0 lcl|Jm3D 95.1 2e-17 lcl|Jm3S 91.5 2e-16 lcl|Jm8S 42.8 0.10 lcl|Jm6D 42.8 0.10 lcl|Jm8D 39.2 1.3 lcl|Jm7D 39.2 1.3 lcl|Jm6S 39.2 1.3 lcl|Jm5D 39.2 1.3 lcl|Jm4S 39.2 1.3 lcl|Jm4D 39.2 1.3 lcl|Jm2D 39.2 1.3 lcl|Jm1S 39.2 1.3 lcl|Jm7S 37.4 4.4 lcl|Jm5S 37.4 4.4 lcl|Jm2S 37.4 4.4 lcl|Jm1D 37.4 4.4 > AT1G14410.1 on AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score = 2693 bits (2986), Expect = 0.0 Identities = 1493/1493 (100%), Gaps = 0/1493 (0%) Strand=Plus/Plus Query 1 CTTCTCTAAGGAGAAGAGATATTATCTCTTACTCTGTTTCTTCTTTCTCTCAATATTCCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCTCTAAGGAGAAGAGATATTATCTCTTACTCTGTTTCTTCTTTCTCTCAATATTCCA 60 Query 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAATAAAGCTGTAGAAACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAATAAAGCTGTAGAAACG 120 Query 121 AATTAACGAAAAGTTATCACTTTCTTTGTCTCGTCATCTCTCTCGAGTCTCGAGTCTCTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AATTAACGAAAAGTTATCACTTTCTTTGTCTCGTCATCTCTCTCGAGTCTCGAGTCTCTG 180 Query 181 AGTGTGTAAAGGAAGCGCCTTTTTCTCTCCTCCATCGTAATTCGCAGAGAAGACACACTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGTGTGTAAAGGAAGCGCCTTTTTCTCTCCTCCATCGTAATTCGCAGAGAAGACACACTA 240 Query 241 CATTGACTGAGAGGGAACAAACACAAAGCGATGTCGCAACTCTTATCGACTCCTCTAATG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CATTGACTGAGAGGGAACAAACACAAAGCGATGTCGCAACTCTTATCGACTCCTCTAATG 300 Query 301 GCGGTCAACTCCAATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCGGTCAACTCCAATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTT 360 Query 361 GCAGTGAAACGGCATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GCAGTGAAACGGCATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCG 420 Query 421 GTTAAGTCTCGCCAGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTAAGTCTCGCCAGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCT 480 Query 481 CCTTCACCTGCTGAAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CCTTCACCTGCTGAAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGG 540 Query 541 AAAGCTGCGTTAACAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AAAGCTGCGTTAACAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCT 600 Query 601 TTCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TTCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGA 660 Query 661 CAATATGATTGGAGCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 CAATATGATTGGAGCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTA 720 Query 721 GTTAGCCTAGGCCCGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAAAGT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 GTTAGCCTAGGCCCGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAAAGT 780 Query 781 GATGAGGGAAAAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GATGAGGGAAAAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCAT 840 Query 841 TTCTTCAACCTAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTCTTCAACCTAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCA 900 Query 901 ATTACTCGAGCAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 ATTACTCGAGCAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTT 960 Query 961 ATAGGCTGGCATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAAC 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ATAGGCTGGCATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAAC 1020 Query 1021 GCTTCGCCTAACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAGGGCCATAA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GCTTCGCCTAACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAGGGCCATAA 1080 Query 1081 CAGGAACATATATCAGAGATCATCCTACCCTTTTTGTTTTGCTGATAGGTTTCGTCAGGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CAGGAACATATATCAGAGATCATCCTACCCTTTTTGTTTTGCTGATAGGTTTCGTCAGGA 1140 Query 1141 TTGATATATGTTCGTAGGTAGCAGAAGAGACTAAAAGTAGTTTATTTTTTCGTCCTTTTG 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TTGATATATGTTCGTAGGTAGCAGAAGAGACTAAAAGTAGTTTATTTTTTCGTCCTTTTG 1200 Query 1201 ACCAAATGTTCAAAAGCCACATATCATTTCGTGGTAAGCGGTTGTATCTCAAAACATCAG 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 ACCAAATGTTCAAAAGCCACATATCATTTCGTGGTAAGCGGTTGTATCTCAAAACATCAG 1260 Query 1261 TCTGATCTTAGTTGTTTTTGATTTAAGAGCAAATCTCAATTTGAAGTCTGAGTACGAGCT 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 TCTGATCTTAGTTGTTTTTGATTTAAGAGCAAATCTCAATTTGAAGTCTGAGTACGAGCT 1320 Query 1321 AGTATGATCCAAATGCCTAGGCTTTGAGACGAGGCTTGAAGATGAATTGGTTTGTCTAGA 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 AGTATGATCCAAATGCCTAGGCTTTGAGACGAGGCTTGAAGATGAATTGGTTTGTCTAGA 1380 Query 1381 GAGATTGGAGAAACAAGACATACCACAAAAACATTTCTCTCTAGTAACAAAAACATCACT 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 GAGATTGGAGAAACAAGACATACCACAAAAACATTTCTCTCTAGTAACAAAAACATCACT 1440 Query 1441 CTACTCTACTCTTGTGGTTTGGGTCTGGATTTTAGTCCGGTTAGTGGTACAAT 1493 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 CTACTCTACTCTTGTGGTTTGGGTCTGGATTTTAGTCCGGTTAGTGGTACAAT 1493 > AT1G14410.1 on AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score = 728 bits (806), Expect = 0.0 Identities = 623/762 (82%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 314 ATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTTGCAGTGAAACGGC 373 || |||| ||||||||||| ||| | ||| | |||| || || || | ||| Sbjct 126 ATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAAA---- 181 Query 374 ATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCGGTTAAGTCTCGCC 433 || |||| | || ||||||||| ||| | |||| || |||| |||||||| | Sbjct 182 ATT-ATTC-CTTTAAAACCGACGGCGAGGT---TGAAA---TTAACGGTGAAGTCTCGAC 233 Query 434 AGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCTCCTTCACCTGCTG 493 | | |||||||| ||||| |||||||| |||||||| |||||||| | || |||| Sbjct 234 AAAGTGATTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAA-AC--GCTG 290 Query 494 AAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAA 553 ||| || || ||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct 291 AAGTATCTTCTCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTA 350 Query 554 CAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCTTTCAAGTTGTCAA 613 | | || ||| |||||||||||||||||||||| || ||||| || |||||| || ||| Sbjct 351 CGATAGAACCACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAA 410 Query 614 AAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGACAATATGATTGGA 673 | || ||||| || |||||||| ||||||||| | |||||||| || ||||||||||||| Sbjct 411 AGGAAGGTTTTTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGA 470 Query 674 GCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCC 733 | | ||| ||||| ||||| ||||| ||||||||||| || | |||||||||||| || | Sbjct 471 GTAGGAAGCAGGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGC 530 Query 734 CGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAA---AGTGATGAGGGAA 790 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | Sbjct 531 CGAGGGAATCATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTA 590 Query 791 AAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCATTTCTTCAACC 850 |||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||| Sbjct 591 AAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACC 650 Query 851 TAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCAATTACTCGAG 910 | ||||||||||||||||| ||||||| |||||||| | ||||||||||| ||| || Sbjct 651 TGAGTGTTCAAAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAG 710 Query 911 CAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTTATAGGCTGGC 970 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct 711 CAGAGTTTGCTGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGA 770 Query 971 ATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAACGCTTCGCCTA 1030 ||||||||| |||||||||||||||||||| | | ||| | ||||| |||||||||| Sbjct 771 GTGCATTTGCTAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTA 830 Query 1031 ACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAG 1072 | |||||||||||||| ||||||| ||||||||| | |||| Sbjct 831 AGTATGGAGGAGACTACGAATGGAGTAGATGATGGAGATTAG 872 >AT1G14410.1 on lcl|Jm3D| AT1G14410.1 on lcl|Jm3D Length=39900371 Score = 95.1 bits (104), Expect = 2e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 688 TTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCCCGAGGGAATCTTGT 747 |||||| | || || || |||||||||| |||||||||||| ||| | ||||| || ||| Sbjct 12667741 TTCTCACTATCAGTGACGGAAATTGGAAATCTAGTTAGCCTTGGCACAAGGGATTCGTGT 12667682 Query 748 GAATTCTTCCATGATCCATTCAAGGGGAAAAG 779 ||||| || |||||||| || ||||| ||||| Sbjct 12667681 GAATTTTTTCATGATCCTTTTAAGGGAAAAAG 12667650 Score = 93.3 bits (102), Expect = 7e-17 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 854 GTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCAATTACTCGAGCAG 913 ||||||| ||||||||| | |||||||||||||||||||| || || || || |||||| Sbjct 12666114 GTGTTCAGAACAAGCTTTTAAATGTGGATGAGAGCATTTATATTCCTATCACCAGAGCAG 12666055 Query 914 AGTTTGCTGTTCTTATCTCTGCATTCAAT 942 || | |||| |||||||| || |||||| Sbjct 12666054 AGCTCACTGTCCTTATCTCAGCTTTCAAT 12666026 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 592 TCTGGAGCTTTCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCT 651 || || || ||||| | || || || ||||| | |||| |||||||||||| ||||| Sbjct 12668809 TCAGGGGCATTCAAACTCTCCAAGGAAGGTTTTGTGCTGCTTCAGTTTGCTCCTGCTGCT 12668750 Query 652 GGTGTACGACAATATGATTGGAGCAAGAAACAGGTGTTC 690 |||||||| ||||||||||||| || || |||||| || Sbjct 12668749 GGTGTACGTCAATATGATTGGAACAGAAAGCAGGTGATC 12668711 Score = 41.0 bits (44), Expect = 0.36 Identities = 34/41 (83%), Gaps = 2/41 (5%) Strand=Plus/Minus Query 92 ATTTTTGAAGAAATAAAGCTGTAGAAACGAATTAACGAAAA 132 ||||||||||||| ||||| || |||||| | ||||||| Sbjct 8341453 ATTTTTGAAGAAAAGAAGCTCTAAAAACGA--TGACGAAAA 8341415 Score = 41.0 bits (44), Expect = 0.36 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Minus Query 25 TCTCTTACTCTGTTTCT-TCTTTCTCTCAATATTCCAAC 62 ||||| |||| | ||| |||||||||||||| |||||| Sbjct 27902864 TCTCTCTCTCTCTCTCTCTCTTTCTCTCAATACTCCAAC 27902826 Score = 39.2 bits (42), Expect = 1.3 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTT 78 |||||||||||| |||||||||| | |||| Sbjct 1175782 TCTCAATATTCCCCCAAAATTTATCATATTT 1175812 Score = 39.2 bits (42), Expect = 1.3 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 54 TATTCCAACAAAATTTATAAAATTTG 79 || ||||| ||||||||||||||||| Sbjct 35474079 TAATCCAAAAAAATTTATAAAATTTG 35474054 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1165 AAGAGACTAAAAGTAGTTTATTTTT 1189 |||||||||||| || ||||||||| Sbjct 16549640 AAGAGACTAAAATTAATTTATTTTT 16549616 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 37278497 TCTCAATATTCCCCCAATATTTATCATATTTGG 37278529 >AT1G14410.1 on lcl|Jm3S| AT1G14410.1 on lcl|Jm3S Length=27832763 Score = 91.5 bits (100), Expect = 2e-16 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 778 AGTGATGAGGGAAAAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGT 837 |||||||||||||| || ||||| ||||||||||| |||||| | || || |||||||| Sbjct 18853699 AGTGATGAGGGAAAGGTCAGGAAGGTGTTGAAAGTGGAGCCTTTTCCCGACGGTTCTGGC 18853758 Query 838 CATTTCTTCAACCTAAGT 855 |||||||| ||| ||||| Sbjct 18853759 CATTTCTTTAACTTAAGT 18853776 Score = 77.0 bits (84), Expect = 5e-12 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 683 AGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCCCGAGGGAAT 742 |||| ||||| | || || | |||||||||||||| |||||||| ||| | ||||| | Sbjct 18853371 AGGTATTCTCGCTATCAGTGATGGAAATTGGAACTCTTGTTAGCCTTGGCACTAGGGATT 18853430 Query 743 CTTGTGAATTCTTCCATGATCCATTCAAGGGGAAAAG 779 | |||||||| | |||| || || ||||| ||||| Sbjct 18853431 CGTGTGAATTTCTTCATGGTCGTTTTAAGGGAAAAAG 18853467 Score = 48.2 bits (52), Expect = 0.002 Identities = 75/105 (71%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 602 TCAAGTTGTCAAAAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGAC 661 |||| | || || || ||||| | | || |||||||||||| | | ||| ||| Sbjct 18848813 TCAAACTCTCCAAGGAAGGTTTTGTGCTACTTCAGTTTGCTCCTGCAATGGCTGTTCGAT 18848872 Query 662 AATATGATTGGAGCAAGAAACAGGTGTTC-TCA-TTGTCTGTTAC 704 ||| |||||||| || || |||||| || ||| || | |||||| Sbjct 18848873 AATGTGATTGGAACAGAAAGCAGGTGATCTTCATTTTTTTGTTAC 18848917 Score = 46.4 bits (50), Expect = 0.008 Identities = 52/69 (75%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 510 ATTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAACAGTGGACCCAAGAGC 569 ||||| |||||||| || |||||||||||||| || | | || || || | ||||| Sbjct 18848390 ATTTT--GTGGGTCACTCAATATACAAAGGGAAGGCAGTCCTTACGGTAGAGACCAGAGC 18848447 Query 570 ACCAGAGTT 578 || ||||| Sbjct 18848448 TCCTGAGTT 18848456 Score = 41.0 bits (44), Expect = 0.36 Identities = 28/31 (90%), Gaps = 2/31 (6%) Strand=Plus/Minus Query 1357 TGAAGATGAATTGGTTTGTCTAGAGAGATTG 1387 |||||||||||| |||||||||||| |||| Sbjct 3923064 TGAAGATGAATT--TTTGTCTAGAGAAATTG 3923036 Score = 39.2 bits (42), Expect = 1.3 Identities = 36/46 (78%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAATA 106 |||||||||||||| ||| | | ||||||| | || || ||||| Sbjct 9404084 ACAAAATTTATAAATTTTTTCTGTCTTTGTAAATATTTAACAAATA 9404129 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 20713092 TCTCAATATTCCTCCAATATTTATCATATTTGG 20713124 Score = 37.4 bits (40), Expect = 4.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 469 TCTTCTTCTTCTCCTTCACCTGCTGAAGGA 498 |||||||||||||||| | | |||||||| Sbjct 21891824 TCTTCTTCTTCTCCTTTAACCTCTGAAGGA 21891853 >AT1G14410.1 on lcl|Jm8S| AT1G14410.1 on lcl|Jm8S Length=19962766 Score = 42.8 bits (46), Expect = 0.10 Identities = 28/31 (90%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 63 AAAATTTATAAAATTTGGGTCTATTTGTAAT 93 |||||||| ||||||||||| ||||||| || Sbjct 3196696 AAAATTTAAAAAATTTGGGTGTATTTGTTAT 3196726 Score = 41.0 bits (44), Expect = 0.36 Identities = 40/48 (83%), Gaps = 3/48 (6%) Strand=Plus/Minus Query 33 TCTGTTTCTTCTTTCTCTCAATAT-TC-CAACAAAATTTATAAAATTT 78 ||||||||||||| |||| ||||| || || ||||| ||||||| || Sbjct 1392535 TCTGTTTCTTCTTCCTCT-AATATGTCACAGTAAAATGTATAAAACTT 1392489 Score = 39.2 bits (42), Expect = 1.3 Identities = 34/40 (85%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 55 ATTCCAACAAAATTTATAAAATTTGGGTCTATTTGTAATT 94 |||||| |||||| |||| |||||||||| |||||||| Sbjct 7964795 ATTCCAG-AAAATTGATAATTTTTGGGTCTA-TTGTAATT 7964832 >AT1G14410.1 on lcl|Jm6D| AT1G14410.1 on lcl|Jm6D Length=38364907 Score = 42.8 bits (46), Expect = 0.10 Identities = 31/35 (89%), Gaps = 1/35 (3%) Strand=Plus/Plus Query 67 TTTATAAAATTTGGG-TCTATTTGTAATTTTTGAA 100 || ||||| |||||| || |||||||||||||||| Sbjct 18723515 TTGATAAATTTTGGGATCCATTTGTAATTTTTGAA 18723549 Score = 42.8 bits (46), Expect = 0.10 Identities = 28/31 (90%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 63 AAAATTTATAAAATTTGGGTCTATTTGTAAT 93 |||||||| ||||||||||| ||||||| || Sbjct 31052789 AAAATTTAAAAAATTTGGGTGTATTTGTTAT 31052759 Score = 37.4 bits (40), Expect = 4.4 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 477 TTCTCCTTCACCTGCTGAAGGATTGCCTGCTAGATTTT 514 ||||||||||||||| | |||| || |||| || ||| Sbjct 2081367 TTCTCCTTCACCTGCAAAGGGATGGCATGCTCGACTTT 2081404 Score = 37.4 bits (40), Expect = 4.4 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 148 GTCTCGTCATCTCTCTCGAGTCTCGAGTCT 177 |||||| | ||||||||| ||||||||||| Sbjct 13312441 GTCTCG-CGTCTCTCTCGCGTCTCGAGTCT 13312413 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 465 TGACTCTTCTTCTTCTCCTTCACCTGCT 492 ||| |||||||||||||| || |||||| Sbjct 33535853 TGATTCTTCTTCTTCTCCCTCCCCTGCT 33535826 >AT1G14410.1 on lcl|Jm8D| AT1G14410.1 on lcl|Jm8D Length=36225362 Score = 39.2 bits (42), Expect = 1.3 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 51 CAATATTCCAACAAAATTTATAAAAT 76 ||||| ||||||||||||||||||| Sbjct 6917213 CAATAGACCAACAAAATTTATAAAAT 6917238 Score = 37.4 bits (40), Expect = 4.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 454 CAGAGGTTCGGTGACTCTTCTTCTTCTCCT 483 |||| ||||||||||| |||| ||||||| Sbjct 5899556 CAGAACTTCGGTGACTCCTCTTTTTCTCCT 5899527 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 9725943 TCTCAATATTCCCTCAATATTTATCATATTTGG 9725911 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 614 AAGATGGTTTCTTATTGCTCCAGTT 638 |||||||||||| |||| ||||||| Sbjct 15362666 AAGATGGTTTCTGATTGGTCCAGTT 15362690 Score = 37.4 bits (40), Expect = 4.4 Identities = 39/51 (76%), Gaps = 3/51 (6%) Strand=Plus/Plus Query 61 ACAAAATTTATAAAATTTGGGTCTATTTGTAAT---TTTTGAAGAAATAAA 108 ||||||||| || |||| | | |||||||||| |||| || |||||| Sbjct 27597576 ACAAAATTTTTATAATTGAGATTTATTTGTAATTGATTTTCAAATAATAAA 27597626 >AT1G14410.1 on lcl|Jm7D| AT1G14410.1 on lcl|Jm7D Length=26765518 Score = 39.2 bits (42), Expect = 1.3 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 760 GATCCATTCAAGGGGAAAAGTGAT 783 ||||||||||||||||||||| || Sbjct 4144523 GATCCATTCAAGGGGAAAAGTAAT 4144546 Score = 39.2 bits (42), Expect = 1.3 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 67 TTTATAAAATTTGGGTCTATTTGTAATTTTTGAA 100 ||| |||| || ||| |||||||||||| ||||| Sbjct 17030650 TTTTTAAATTTAGGGCCTATTTGTAATTGTTGAA 17030683 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 8940727 TCTCAATATTCCCTCAATATTTATCATATTTGG 8940759 >AT1G14410.1 on lcl|Jm6S| AT1G14410.1 on lcl|Jm6S Length=22373256 Score = 39.2 bits (42), Expect = 1.3 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1250 CAAAACATCAGTCTGATCTTAGTTGTTTTTG 1280 |||||||||||| |||| || | |||||||| Sbjct 2199894 CAAAACATCAGTTTGATTTTGGATGTTTTTG 2199924 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 468 CTCTTCTTCTTCTCCTTCACCTGCT 492 |||||||||||||||| ||||| || Sbjct 9583119 CTCTTCTTCTTCTCCTCCACCTTCT 9583095 Score = 37.4 bits (40), Expect = 4.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1367 TTGGTTTGTCTAGAGAGATTGGAGAAACAA 1396 |||| ||| | |||||||||||||| |||| Sbjct 12351631 TTGGCTTGGCGAGAGAGATTGGAGAGACAA 12351602 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 69 TATAAAATTTGGGTCTATTTGTAATTTT 96 |||||||||||| ||||||| |||||| Sbjct 16627273 TATAAAATTTGGTTCTATTTAAAATTTT 16627300 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 469 TCTTCTTCTTCTCCTTCACCTGCTG 493 ||||||||||||||||| |||||| Sbjct 18332565 TCTTCTTCTTCTCCTTCTTCTGCTG 18332589 Score = 37.4 bits (40), Expect = 4.4 Identities = 33/39 (85%), Gaps = 3/39 (8%) Strand=Plus/Plus Query 921 TGTTCTTA-TCTCTGCATTCAATTTTGTCTTG--CCTTA 956 |||| ||| |||||||||| |||||||| ||| ||||| Sbjct 18491752 TGTTGTTAATCTCTGCATTTAATTTTGTTTTGTTCCTTA 18491790 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 465 TGACTCTTCTTCTTCTCCTTCACCTGCT 492 |||||||||||||||| ||||| || || Sbjct 21386713 TGACTCTTCTTCTTCTTCTTCATCTTCT 21386740 >AT1G14410.1 on lcl|Jm5D| AT1G14410.1 on lcl|Jm5D Length=35798223 Score = 39.2 bits (42), Expect = 1.3 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 52 AATATTCCAACAAAATTTATAAAATT 77 |||||| ||| ||||||||||||||| Sbjct 2732462 AATATTGCAAGAAAATTTATAAAATT 2732487 Score = 39.2 bits (42), Expect = 1.3 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 1394 CAAGACATACCACAAAAACATTTCTCTCT 1422 ||||| ||| | ||||||||||||||||| Sbjct 5378963 CAAGAAATAGCGCAAAAACATTTCTCTCT 5378935 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 48 TCTCAATATTCCAACAAAATTTATAAA 74 ||||||||||||||||||| || |||| Sbjct 10762285 TCTCAATATTCCAACAAAACTT-TAAA 10762260 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 27130027 TCTCAATATTCCCTCAATATTTATCATATTTGG 27129995 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/27 (93%), Gaps = 2/27 (7%) Strand=Plus/Plus Query 50 TCAATATTCCAACAAAATTTATAAAAT 76 ||||||| |||||||||||||||||| Sbjct 32082990 TCAATAT--CAACAAAATTTATAAAAT 32083014 >AT1G14410.1 on lcl|Jm4S| AT1G14410.1 on lcl|Jm4S Length=27577207 Score = 39.2 bits (42), Expect = 1.3 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1045 TATGAATGGAATAGATGATGAATC 1068 |||| ||||||||||||||||||| Sbjct 17759815 TATGGATGGAATAGATGATGAATC 17759792 Score = 37.4 bits (40), Expect = 4.4 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 37 TTTCTTCTTTCTCTCAATATTCC 59 ||||||||||||| ||||||||| Sbjct 10546002 TTTCTTCTTTCTCACAATATTCC 10545980 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| | || |||||| | |||||| Sbjct 12365974 TCTCAATATTCCCATAATATTTATCATATTTGG 12366006 >AT1G14410.1 on lcl|Jm4D| AT1G14410.1 on lcl|Jm4D Length=35629462 Score = 39.2 bits (42), Expect = 1.3 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 95 TTTGAAGAAATAAAGCTGTAGAAA 118 ||| |||||||||||||||||||| Sbjct 29158386 TTTTAAGAAATAAAGCTGTAGAAA 29158409 Score = 37.4 bits (40), Expect = 4.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1421 CTAGTAACAAAAACATCACTCTACTCTACT 1450 |||||||||||| |||||| |||||| || Sbjct 10918924 CTAGTAACAAAAGAATCACTATACTCTTCT 10918953 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 465 TGACTCTTCTTCTTCTCCTTCACCT 489 |||||||||||||||| |||| ||| Sbjct 14903561 TGACTCTTCTTCTTCTTCTTCTCCT 14903537 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 51 CAATATTCCAACAAAATTTATAAAATTT 78 ||||||||||| || |||||||| |||| Sbjct 19192053 CAATATTCCAATAATATTTATAACATTT 19192026 >AT1G14410.1 on lcl|Jm2D| AT1G14410.1 on lcl|Jm2D Length=43614719 Score = 39.2 bits (42), Expect = 1.3 Identities = 28/30 (93%), Gaps = 2/30 (7%) Strand=Plus/Plus Query 484 TCACCT-GCTGAAGGATTGCCTGCTAGATT 512 |||||| ||||||| ||||||||||||||| Sbjct 8770438 TCACCTCGCTGAAG-ATTGCCTGCTAGATT 8770466 Score = 37.4 bits (40), Expect = 4.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1341 GCTTTGAGACGAGGCTTGAAGATGAATTGG 1370 |||| |||||| ||||||||||||| ||| Sbjct 10959651 GCTTGAAGACGAAGCTTGAAGATGAAATGG 10959622 Score = 37.4 bits (40), Expect = 4.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 45 TTCTCTCAATATTCCAACAA 64 |||||||||||||||||||| Sbjct 21092214 TTCTCTCAATATTCCAACAA 21092233 >AT1G14410.1 on lcl|Jm1S| AT1G14410.1 on lcl|Jm1S Length=30169828 Score = 39.2 bits (42), Expect = 1.3 Identities = 33/40 (83%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 63 AAAATTTATAAAATTT--GGGTCTATTTGTAATTTTTGAA 100 ||| ||| ||||||| ||| | |||||||||||||||| Sbjct 8843867 AAAGTTTGGAAAATTTTAGGGCCCATTTGTAATTTTTGAA 8843906 Score = 39.2 bits (42), Expect = 1.3 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 84 TATTTGTAATTTTTGAAGAAATAA 107 |||||||||||||| ||||||||| Sbjct 11391714 TATTTGTAATTTTTAAAGAAATAA 11391737 Score = 39.2 bits (42), Expect = 1.3 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 76 TTTGGGTCTATTTGTAATTTTTGAAG 101 |||| ||| ||||||||||||||||| Sbjct 19825704 TTTGAGTCCATTTGTAATTTTTGAAG 19825679 Score = 37.4 bits (40), Expect = 4.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1101 CATCCTACCCTTTTTGTTTT 1120 |||||||||||||||||||| Sbjct 9116540 CATCCTACCCTTTTTGTTTT 9116521 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 9414307 TCTCAATATTCCCCCAATATTTATCATATTTGG 9414339 Score = 37.4 bits (40), Expect = 4.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1368 TGGTTTGTCTAGAGAGATTGGAGAA 1392 || |||||||||||| ||||||||| Sbjct 24078004 TGTTTTGTCTAGAGAAATTGGAGAA 24077980 >AT1G14410.1 on lcl|Jm7S| AT1G14410.1 on lcl|Jm7S Length=21889424 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 2758980 TCTCAATATTCCTCCAATATTTATCATATTTGG 2758948 >AT1G14410.1 on lcl|Jm5S| AT1G14410.1 on lcl|Jm5S Length=32113326 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 9015585 TCTCAATATTCCCTCAATATTTATCATATTTGG 9015617 Score = 37.4 bits (40), Expect = 4.4 Identities = 31/38 (82%), Gaps = 4/38 (11%) Strand=Plus/Plus Query 67 TTTATAAAATTTGGGTCTATTTGTAATTTTTGAAGAAA 104 |||||||||||| |||||||| ||||| |||||| Sbjct 17087264 TTTATAAAATTTTTGTCTATTT----TTTTTAAAGAAA 17087297 >AT1G14410.1 on lcl|Jm2S| AT1G14410.1 on lcl|Jm2S Length=34707362 Score = 37.4 bits (40), Expect = 4.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 73 AAATTTGGGTCTATTTGTAATTTTTGAA 100 ||||||||||| |||| |||||| |||| Sbjct 2334433 AAATTTGGGTCGATTTTTAATTTGTGAA 2334460 >AT1G14410.1 on lcl|Jm1D| AT1G14410.1 on lcl|Jm1D Length=49856174 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 13585572 TCTCAATATTCCCCCAATATTTATCATATTTGG 13585604 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 24811256 TCTCAATATTCCTCCAATATTTATCATATTTGG 24811288 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 30315665 TCTCAATATTCCCCCAATATTTATCATATTTGG 30315697 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 48 TCTCAATATTCCAACAAAATTTATAAAATTTGG 80 |||||||||||| ||| |||||| | |||||| Sbjct 32752118 TCTCAATATTCCCCCAATATTTATCATATTTGG 32752150 Score = 37.4 bits (40), Expect = 4.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1354 GCTTGAAGATGAATTGGTTTGTCTAGAGAGATT 1386 |||||||||||| || | ||||| |||||| || Sbjct 49319449 GCTTGAAGATGATTTTGGTTGTCCAGAGAGTTT 49319417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771781699058 Query= AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-26863454 REVERSE LENGTH=972 Length=972 Score E Sequences producing significant alignments: (Bits) Value AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-... 1754 0.0 lcl|Jm2D 71.6 1e-10 lcl|Jm5D 42.8 0.067 lcl|Jm8D 41.0 0.23 lcl|Jm6D 39.2 0.81 lcl|Jm3D 39.2 0.81 lcl|Jm1S 39.2 0.81 lcl|Jm7S 37.4 2.8 lcl|Jm7D 37.4 2.8 lcl|Jm4S 37.4 2.8 lcl|Jm4D 37.4 2.8 lcl|Jm2S 37.4 2.8 lcl|Jm8S 35.6 9.9 lcl|Jm5S 35.6 9.9 lcl|Jm1D 35.6 9.9 > AT1G71260.1 on AT1G71260.1 | Symbols: WHY2, ATWHY2 | WHIRLY 2 | chr1:26861657-26863454 REVERSE LENGTH=972 Length=972 Score = 1754 bits (1944), Expect = 0.0 Identities = 972/972 (100%), Gaps = 0/972 (0%) Strand=Plus/Plus Query 1 AAATCATAAAACCTCAGAAGTCGGAAGACCTCAAGTGATGCTTTTTACTCGAGACAGAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AAATCATAAAACCTCAGAAGTCGGAAGACCTCAAGTGATGCTTTTTACTCGAGACAGAAG 60 Query 61 AAGATGATGAAGCAAGCCCGCTCTTTGCTCTCCAGGAGCCTTTGTGACCAAAGTAAGTCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGATGATGAAGCAAGCCCGCTCTTTGCTCTCCAGGAGCCTTTGTGACCAAAGTAAGTCA 120 Query 121 CTTTTCGAAGCTTCGACGTTGCGTGGTTTTGCAAGCTGGTCAAATTCTTCAACCCCTGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTTTCGAAGCTTCGACGTTGCGTGGTTTTGCAAGCTGGTCAAATTCTTCAACCCCTGGA 180 Query 181 CGTGGATTCCCTGGTAAAGATGCCGCAAAGCCTAGTGGTCGATTGTTCGCACCTTATTCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGTGGATTCCCTGGTAAAGATGCCGCAAAGCCTAGTGGTCGATTGTTCGCACCTTATTCT 240 Query 241 ATCTTCAAAGGAAAAGCTGCTCTCTCTGTTGAACCTGTTCTTCCCAGTTTCACTGAAATC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ATCTTCAAAGGAAAAGCTGCTCTCTCTGTTGAACCTGTTCTTCCCAGTTTCACTGAAATC 300 Query 301 GATTCGGGAAATCTTCGGATAGATCGTCGTGGATCCTTAATGATGACTTTTATGCCTGCT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GATTCGGGAAATCTTCGGATAGATCGTCGTGGATCCTTAATGATGACTTTTATGCCTGCT 360 Query 361 ATTGGTGAGCGTAAGTACGACTGGGAAAAGAAACAGAAATTTGCTTTGTCACCTACTGAA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATTGGTGAGCGTAAGTACGACTGGGAAAAGAAACAGAAATTTGCTTTGTCACCTACTGAA 420 Query 421 GTTGGATCCTTAATTAGCATGGGTTCCAAAGACAGCTCCGAGTTTTTCCATGACCCTTCC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTGGATCCTTAATTAGCATGGGTTCCAAAGACAGCTCCGAGTTTTTCCATGACCCTTCC 480 Query 481 ATGAAATCAAGTAATGCTGGTCAAGTCAGGAAGTCACTGTCAGTTAAGCCCCACGCAGAT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATGAAATCAAGTAATGCTGGTCAAGTCAGGAAGTCACTGTCAGTTAAGCCCCACGCAGAT 540 Query 541 GGTAGCGGCTACTTCATCTCATTGAGCGTTAACAATAGCATCCTCAAAACCAATGACTAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GGTAGCGGCTACTTCATCTCATTGAGCGTTAACAATAGCATCCTCAAAACCAATGACTAT 600 Query 601 TTTGTGGTTCCTGTCACAAAAGCTGAATTTGCAGTGATGAAGACAGCTTTTAGTTTTGCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TTTGTGGTTCCTGTCACAAAAGCTGAATTTGCAGTGATGAAGACAGCTTTTAGTTTTGCT 660 Query 661 CTTCCACACATCATGGGTTGGAATCGGTTAACTGGTCACGTTAATACTGAAGCTCTGCCG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 CTTCCACACATCATGGGTTGGAATCGGTTAACTGGTCACGTTAATACTGAAGCTCTGCCG 720 Query 721 TCGAGGAATGTTTCTCATCTAAAGACTGAACCACAGTTAGAGCTGGAGTGGGATAAATGA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TCGAGGAATGTTTCTCATCTAAAGACTGAACCACAGTTAGAGCTGGAGTGGGATAAATGA 780 Query 781 AATGATGAGAGTAGTAGGAACGGAGTAAATTGAAAATGCATGTGTTCTTTTTTCTGGCAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AATGATGAGAGTAGTAGGAACGGAGTAAATTGAAAATGCATGTGTTCTTTTTTCTGGCAT 840 Query 841 TTGGTGCACACGAAACTCGGCATGCTCTGTTTTGAAACTAATATGTCCTCTCTAAGACTT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTGGTGCACACGAAACTCGGCATGCTCTGTTTTGAAACTAATATGTCCTCTCTAAGACTT 900 Query 901 CTAAATCATGGGTCTTCTTGTTTTCATTAGCACATATGTTATTTAGTACAAGCATTTTGG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CTAAATCATGGGTCTTCTTGTTTTCATTAGCACATATGTTATTTAGTACAAGCATTTTGG 960 Query 961 TTTCAACTTGAT 972 |||||||||||| Sbjct 961 TTTCAACTTGAT 972 >AT1G71260.1 on lcl|Jm2D| AT1G71260.1 on lcl|Jm2D Length=43614719 Score = 71.6 bits (78), Expect = 1e-10 Identities = 62/77 (81%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 573 CAATAGCATCCTCAAAACCAATGACTATTTTGTGGTTCCTGTCACAAAAGCTGAATTTGC 632 ||| | ||| || |||||||| || || || ||||||||||||| |||||||| | Sbjct 1065231 CAACAACATTCTTAAAACCAAAGAATACTTCACTGTTCCTGTCACAACTGCTGAATTCTC 1065290 Query 633 AGTGATGAAGACAGCTT 649 ||||||||||||||||| Sbjct 1065291 AGTGATGAAGACAGCTT 1065307 Score = 66.2 bits (72), Expect = 6e-09 Identities = 57/71 (80%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 490 AGTAATGCTGGTCAAGTCAGGAAGTCACTGTCAGTTAAGCCCCACGCAGATGGTAGCGGC 549 || ||||||||||||||||||||| | ||| ||||||| || || |||||||| ||| Sbjct 1060355 AGCAATGCTGGTCAAGTCAGGAAGAGCTTATCAATTAAGCCTCATGCGGATGGTAGTGGC 1060414 Query 550 TACTTCATCTC 560 || || || || Sbjct 1060415 TATTTAATTTC 1060425 Score = 51.8 bits (56), Expect = 1e-04 Identities = 66/91 (73%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 401 TTGCTTTGTCACCTACTGAAGTTGGATCCTTAATTAGCATGGGTTCCAAAGACAGCTCCG 460 ||||||||||| || || ||||| || || |||||| |||| | |||| | | Sbjct 1060066 TTGCTTTGTCAGTGACAGAGGTTGGGTCTTTGATTAGCTTGGGCCCTCAAGATTCTTGTG 1060125 Query 461 AGTTTTTCCATGACCCTTCCATGAAATCAAG 491 || | || || ||||| || ||||||||||| Sbjct 1060126 AGATGTTTCACGACCCATCAATGAAATCAAG 1060156 Score = 41.0 bits (44), Expect = 0.23 Identities = 54/75 (72%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 322 GATCGTCGTGGATCCTTAATGATGACTTTTATGCCTGCTATTGGTGAGCGTAAGTACGAC 381 || |||||||| | | ||| | | || | ||||||||||||||||| ||||| || Sbjct 1059803 GACCGTCGTGGTGTCATGATGTTTAAGTTCTTACCTGCTATTGGTGAGCGCAAGTATGAT 1059862 Query 382 TGGGAAAAGAAACAG 396 || |||| |||| Sbjct 1059863 AATGAGAAGAGACAG 1059877 Score = 39.2 bits (42), Expect = 0.81 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 68 TGAAGCAAGCCCGCTCTTTGCTCTCC 93 |||||| ||||| ||||||||||||| Sbjct 2484805 TGAAGCCAGCCCTCTCTTTGCTCTCC 2484780 Score = 39.2 bits (42), Expect = 0.81 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Minus Query 51 GAGACAGAAGAAGATGATGAAGCAAGCC 78 |||||| ||||||||||||||| ||||| Sbjct 32898336 GAGACAAAAGAAGATGATGAAG-AAGCC 32898310 Score = 37.4 bits (40), Expect = 2.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 926 ATTAGCACATATGTTATTTAGTACAAGCATTTT 958 ||||| | || | || ||||||||||||||||| Sbjct 15995340 ATTAGAAGATTTATTTTTTAGTACAAGCATTTT 15995308 Score = 37.4 bits (40), Expect = 2.8 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 44 TTTACTCGAGACAGAAGAA-GATGATGAAG 72 |||||| |||||||||||| | |||||||| Sbjct 20763466 TTTACTGGAGACAGAAGAAGGGTGATGAAG 20763495 Score = 35.6 bits (38), Expect = 9.9 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 386 AAAAGAAACAGAAATTTGC 404 ||||||||||||||||||| Sbjct 2010896 AAAAGAAACAGAAATTTGC 2010914 Score = 35.6 bits (38), Expect = 9.9 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 664 CCACACATCATGGGTTGGA 682 ||||||||||||||||||| Sbjct 16299092 CCACACATCATGGGTTGGA 16299074 Score = 35.6 bits (38), Expect = 9.9 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 936 ATGTTATTTAGTACAAGCATTTTG 959 ||| |||||| ||||||||||||| Sbjct 22772989 ATGGTATTTAATACAAGCATTTTG 22773012 Score = 35.6 bits (38), Expect = 9.9 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 758 TAGAGCTGGAGTGGGATAAATGAA 781 |||| |||||||||||||||||| Sbjct 22904262 TAGAATTGGAGTGGGATAAATGAA 22904285 >AT1G71260.1 on lcl|Jm5D| AT1G71260.1 on lcl|Jm5D Length=35798223 Score = 42.8 bits (46), Expect = 0.067 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 572 ACAATAGCATCCTCAAAACCAATGACTATTTTG 604 ||||||||||||||||| |||| |||||||| Sbjct 14641893 ACAATAGCATCCTCAAACCCAAACTCTATTTTG 14641925 Score = 37.4 bits (40), Expect = 2.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 572 ACAATAGCATCCTCAAAACCAATGACTATTTTG 604 ||||||||||| ||||| |||| |||||||| Sbjct 14664990 ACAATAGCATCATCAAACCCAAACTCTATTTTG 14665022 Score = 35.6 bits (38), Expect = 9.9 Identities = 22/24 (92%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 629 TTGCAGTGATGAAGACAGCTTTTA 652 |||||||||||| || |||||||| Sbjct 26717961 TTGCAGTGATGATGAGAGCTTTTA 26717938 >AT1G71260.1 on lcl|Jm8D| AT1G71260.1 on lcl|Jm8D Length=36225362 Score = 41.0 bits (44), Expect = 0.23 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 346 ACTTTTATGCCTGCTATTGGTGAGCGTAAGTACGA 380 |||| ||||||| ||||||||||| | ||||| || Sbjct 9327572 ACTTGTATGCCTCCTATTGGTGAGAGAAAGTATGA 9327538 Score = 37.4 bits (40), Expect = 2.8 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 53 GACAGAAGAAGATGATGAAG 72 |||||||||||||||||||| Sbjct 16446406 GACAGAAGAAGATGATGAAG 16446387 >AT1G71260.1 on lcl|Jm6D| AT1G71260.1 on lcl|Jm6D Length=38364907 Score = 39.2 bits (42), Expect = 0.81 Identities = 34/40 (85%), Gaps = 2/40 (5%) Strand=Plus/Minus Query 808 AATTGAAAATGCATGTGTTCTTTT-TTCTGGCATTTGGTG 846 |||| |||||||| ||| |||||| ||||||| ||| ||| Sbjct 37339635 AATT-AAAATGCAAGTGATCTTTTTTTCTGGCTTTTTGTG 37339597 Score = 37.4 bits (40), Expect = 2.8 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 599 ATTTTGTGGTTCCTGTCACAAAAGCTGAAT 628 || ||||||||||| || ||||||||||| Sbjct 3269683 ATATTGTGGTTCCTAGCATAAAAGCTGAAT 3269712 Score = 37.4 bits (40), Expect = 2.8 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 808 AATTGAAA-ATGCATGTGTTCTTTTTTCTGGCATTTG 843 |||| ||| ||||||||||| | ||||||| ||||| Sbjct 7264894 AATTTAAATATGCATGTGTTATGATTTCTGGAATTTG 7264930 >AT1G71260.1 on lcl|Jm3D| AT1G71260.1 on lcl|Jm3D Length=39900371 Score = 39.2 bits (42), Expect = 0.81 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 248 AAGGAAAAGCTGCTCTCTCTGTTGAACCTGTTCT 281 |||| |||||||||||||||||| | | || ||| Sbjct 4005482 AAGGTAAAGCTGCTCTCTCTGTTTATCTTGCTCT 4005515 Score = 37.4 bits (40), Expect = 2.8 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 244 TTCAAAGG-AAAAGCTGCTCTCTCTGTTGA 272 ||||||| ||||||| ||||||||||||| Sbjct 7815516 TTCAAAGATAAAAGCTTCTCTCTCTGTTGA 7815487 Score = 35.6 bits (38), Expect = 9.9 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 814 AAATGCATGTGTTCTTTTTTCT 835 |||||||||||||||| ||||| Sbjct 32015929 AAATGCATGTGTTCTTCTTTCT 32015950 >AT1G71260.1 on lcl|Jm1S| AT1G71260.1 on lcl|Jm1S Length=30169828 Score = 39.2 bits (42), Expect = 0.81 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 811 TGAAAATGCATGTGTTCTTTTTTC 834 ||||||||||||| |||||||||| Sbjct 8325366 TGAAAATGCATGTTTTCTTTTTTC 8325389 Score = 35.6 bits (38), Expect = 9.9 Identities = 24/27 (89%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 935 TATGTTATTTAGTACAAGCATTTTGGT 961 |||||| || |||| |||||||||||| Sbjct 3972464 TATGTTGTTAAGTAAAAGCATTTTGGT 3972490 >AT1G71260.1 on lcl|Jm7S| AT1G71260.1 on lcl|Jm7S Length=21889424 Score = 37.4 bits (40), Expect = 2.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 424 GGATCCTTAATTAGCATGGG-TTCCAA 449 |||||||||||||| ||||| |||||| Sbjct 4569211 GGATCCTTAATTAGAATGGGATTCCAA 4569237 >AT1G71260.1 on lcl|Jm7D| AT1G71260.1 on lcl|Jm7D Length=26765518 Score = 37.4 bits (40), Expect = 2.8 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 912 GTCTTCTTGTTTTCATTAGCACATATGT 939 |||||||| ||| |||||||||||||| Sbjct 9433996 GTCTTCTTTCTTTGATTAGCACATATGT 9433969 Score = 35.6 bits (38), Expect = 9.9 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 815 AATGCATGTGTTCTTTTTT 833 ||||||||||||||||||| Sbjct 2650512 AATGCATGTGTTCTTTTTT 2650530 >AT1G71260.1 on lcl|Jm4S| AT1G71260.1 on lcl|Jm4S Length=27577207 Score = 37.4 bits (40), Expect = 2.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 605 TGGTTCCTGTCACAAAAG-CTGAATTT 630 |||||||||||||||||| || ||||| Sbjct 11275614 TGGTTCCTGTCACAAAAGTCTCAATTT 11275588 Score = 35.6 bits (38), Expect = 9.9 Identities = 24/27 (89%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 37 GATGCTTTTTACTCGAGACAGAAGAAG 63 || ||||||||||||||| |||| ||| Sbjct 52506 GAAGCTTTTTACTCGAGAGAGAAAAAG 52532 Score = 35.6 bits (38), Expect = 9.9 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 773 ATAAATGAAATGATGAGAGTAG 794 ||||||||||| |||||||||| Sbjct 24562731 ATAAATGAAATAATGAGAGTAG 24562710 >AT1G71260.1 on lcl|Jm4D| AT1G71260.1 on lcl|Jm4D Length=35629462 Score = 37.4 bits (40), Expect = 2.8 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 605 TGGTTCCTGTCACAAAAG-CTGAATTT 630 |||||||||||||||||| || ||||| Sbjct 13239257 TGGTTCCTGTCACAAAAGTCTCAATTT 13239283 >AT1G71260.1 on lcl|Jm2S| AT1G71260.1 on lcl|Jm2S Length=34707362 Score = 37.4 bits (40), Expect = 2.8 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 809 ATTGAAAATGCATGTGTTCTTTTTTCTGGCATT 841 ||||||| || ||| |||||||||||| |||| Sbjct 255375 ATTGAAACTGAATGACTTCTTTTTTCTGTCATT 255407 Score = 35.6 bits (38), Expect = 9.9 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 AAATCATAAAACCTCAGAA 19 ||||||||||||||||||| Sbjct 30534510 AAATCATAAAACCTCAGAA 30534492 >AT1G71260.1 on lcl|Jm8S| AT1G71260.1 on lcl|Jm8S Length=19962766 Score = 35.6 bits (38), Expect = 9.9 Identities = 40/52 (77%), Gaps = 5/52 (10%) Strand=Plus/Plus Query 867 CTGTTTTGAAACTAATATGTCCTCTCTAAGACTTCTAAATCATGGGTCTTCT 918 |||||||| | |||| || ||| | | ||| ||||||||||||||||| Sbjct 14281319 CTGTTTTG----TGATAT-TCTTCTATCAATCTTATAAATCATGGGTCTTCT 14281365 >AT1G71260.1 on lcl|Jm5S| AT1G71260.1 on lcl|Jm5S Length=32113326 Score = 35.6 bits (38), Expect = 9.9 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 107 ACCAAAGTAAGTCACTTTT 125 ||||||||||||||||||| Sbjct 1192145 ACCAAAGTAAGTCACTTTT 1192163 Score = 35.6 bits (38), Expect = 9.9 Identities = 24/26 (92%), Gaps = 1/26 (4%) Strand=Plus/Plus Query 732 TTCTCATCTAAAGACTGAAC-CACAG 756 |||||||| ||||||||||| ||||| Sbjct 2104411 TTCTCATCAAAAGACTGAACACACAG 2104436 Score = 35.6 bits (38), Expect = 9.9 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 51 GAGACAGAAGAAGATGATGAAG 72 |||| ||||||||||||||||| Sbjct 2989423 GAGAAAGAAGAAGATGATGAAG 2989402 >AT1G71260.1 on lcl|Jm1D| AT1G71260.1 on lcl|Jm1D Length=49856174 Score = 35.6 bits (38), Expect = 9.9 Identities = 31/38 (82%), Gaps = 2/38 (5%) Strand=Plus/Plus Query 896 GACTTCTAA--ATCATGGGTCTTCTTGTTTTCATTAGC 931 || |||||| || ||| ||| ||||||||||||||| Sbjct 38884234 GATTTCTAATTATGCTGGTTCTGCTTGTTTTCATTAGC 38884271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496748685919 Query= AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score E Sequences producing significant alignments: (Bits) Value AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRL... 1992 0.0 AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY... 728 0.0 lcl|Jm3D 100 3e-19 lcl|Jm3S 73.4 4e-11 lcl|Jm6S 42.8 0.076 lcl|Jm2D 41.0 0.26 lcl|Jm8D 39.2 0.92 lcl|Jm7D 39.2 0.92 lcl|Jm4S 39.2 0.92 lcl|Jm6D 37.4 3.2 lcl|Jm5S 37.4 3.2 lcl|Jm5D 37.4 3.2 lcl|Jm4D 37.4 3.2 lcl|Jm2S 37.4 3.2 lcl|Jm1D 37.4 3.2 > AT2G02740.1 on AT2G02740.1 | Symbols: PTAC11, ATWHY3, WHY3 | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 | chr2:769334-771235 FORWARD LENGTH=1104 Length=1104 Score = 1992 bits (2208), Expect = 0.0 Identities = 1104/1104 (100%), Gaps = 0/1104 (0%) Strand=Plus/Plus Query 1 ATCGTAATCCCGCGGTGAAGAAGACGAAGAAGCATTGAGAGTGAAAAGAAAAACAATGTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCGTAATCCCGCGGTGAAGAAGACGAAGAAGCATTGAGAGTGAAAAGAAAAACAATGTC 60 Query 61 GCAGCTGTTATCTTCTCCTCCAATGGCGGTTTTCTCCAAAACCTTCATAAACCATAAGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCAGCTGTTATCTTCTCCTCCAATGGCGGTTTTCTCCAAAACCTTCATAAACCATAAGTT 120 Query 121 TTCAGATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTCAGATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAA 180 Query 181 AATTATTCCTTTAAAACCGACGGCGAGGTTGAAATTAACGGTGAAGTCTCGACAAAGTGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AATTATTCCTTTAAAACCGACGGCGAGGTTGAAATTAACGGTGAAGTCTCGACAAAGTGA 240 Query 241 TTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAAACGCTGAAGTATCTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAAACGCTGAAGTATCTTC 300 Query 301 TCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTACGATAGAACC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTACGATAGAACC 360 Query 361 ACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAAAGGAAGGTTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAAAGGAAGGTTT 420 Query 421 TTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGGAAGCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGGAAGCA 480 Query 481 GGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAATC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAATC 540 Query 541 ATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTAAAGTGAGGAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 ATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTAAAGTGAGGAA 600 Query 601 AGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACCTGAGTGTTCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACCTGAGTGTTCA 660 Query 661 AAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAGCAGAGTTTGC 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAGCAGAGTTTGC 720 Query 721 TGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGAGTGCATTTGC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGAGTGCATTTGC 780 Query 781 TAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTAAGTATGGAGG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 TAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTAAGTATGGAGG 840 Query 841 AGACTACGAATGGAGTAGATGATGGAGATTAGAGGCAATCTTGCAAACTCGGTTTTTCGG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 AGACTACGAATGGAGTAGATGATGGAGATTAGAGGCAATCTTGCAAACTCGGTTTTTCGG 900 Query 901 TCCATACCATCTTTTTGTTGTTGCAAATCAATGAGTCACCAAGAGCTGTTCGAGATAGAG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TCCATACCATCTTTTTGTTGTTGCAAATCAATGAGTCACCAAGAGCTGTTCGAGATAGAG 960 Query 961 AACGGAAAGAAAAGCAGCAGCAGAGACTGAAGTAGTTTAGACCAAATGGAATGTGTTGTT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AACGGAAAGAAAAGCAGCAGCAGAGACTGAAGTAGTTTAGACCAAATGGAATGTGTTGTT 1020 Query 1021 GTGTAGGAAATAACTTATATTTTGTGTTAGACAATCTGTATTCATTCAAAAGCAATCAAT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GTGTAGGAAATAACTTATATTTTGTGTTAGACAATCTGTATTCATTCAAAAGCAATCAAT 1080 Query 1081 TACAATTTTGCTAATACAAGAATC 1104 |||||||||||||||||||||||| Sbjct 1081 TACAATTTTGCTAATACAAGAATC 1104 > AT2G02740.1 on AT1G14410.1 | Symbols: PTAC1, ATWHY1, WHY1 | A. THALIANA WHIRLY 1, WHIRLY 1 | chr1:4928921-4931080 REVERSE LENGTH=1493 Length=1493 Score = 728 bits (806), Expect = 0.0 Identities = 623/762 (82%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 126 ATGCTCGTTTTCTCTCTTCTCACTCAATTCTCACCTCCGGTGGATTCGCCGGAAAA---- 181 || |||| ||||||||||| ||| | ||| | |||| || || || | ||| Sbjct 314 ATCCTCGCTTTCTCTCTTCGTCTTCAGTACTCGTCACCGGAGGTTTTGCAGTGAAACGGC 373 Query 182 ATT-ATTC-CTTTAAAACCGACGGCGAGGT---TGAAA---TTAACGGTGAAGTCTCGAC 233 || |||| | || ||||||||| ||| | |||| || |||| |||||||| | Sbjct 374 ATGGATTCGCCTTGAAACCGACGACGAAGACGGTGAAGCTCTTCTCGGTTAAGTCTCGCC 433 Query 234 AAAGTGATTACTTTGAGAAACAGAGGTTTGGTGACTCGTCTTCTTCGCAAA-AC--GCTG 290 | | |||||||| ||||| |||||||| |||||||| |||||||| | || |||| Sbjct 434 AGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCTTCTTCTTCTCCTTCACCTGCTG 493 Query 291 AAGTATCTTCTCCTAGATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTA 350 ||| || || ||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct 494 AAGGATTGCCTGCTAGATTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAA 553 Query 351 CGATAGAACCACGAGCACCAGAGTTTGTGGCTTTGGAATCTGGTGCGTTCAAGCTGACAA 410 | | || ||| |||||||||||||||||||||| || ||||| || |||||| || ||| Sbjct 554 CAGTGGACCCAAGAGCACCAGAGTTTGTGGCTTTAGACTCTGGAGCTTTCAAGTTGTCAA 613 Query 411 AGGAAGGTTTTTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGA 470 | || ||||| || |||||||| ||||||||| | |||||||| || ||||||||||||| Sbjct 614 AAGATGGTTTCTTATTGCTCCAGTTTGCTCCTTCTGCTGGTGTACGACAATATGATTGGA 673 Query 471 GTAGGAAGCAGGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGC 530 | | ||| ||||| ||||| ||||| ||||||||||| || | |||||||||||| || | Sbjct 674 GCAAGAAACAGGTGTTCTCATTGTCTGTTACAGAAATTGGAACTCTAGTTAGCCTAGGCC 733 Query 531 CGAGGGAATCATGTGAATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTA 590 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | Sbjct 734 CGAGGGAATCTTGTGAATTCTTCCATGATCCATTCAAGGGGAAA---AGTGATGAGGGAA 790 Query 591 AAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGCCGCTTCTTTAACC 650 |||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||| Sbjct 791 AAGTAAGGAAAGTGTTGAAAGTTGAGCCTCTCCCAGATGGTTCTGGTCATTTCTTCAACC 850 Query 651 TGAGTGTTCAAAACAAGCTCTTGAATGTAGATGAGAGTGTATACATACCAATCACTAAAG 710 | ||||||||||||||||| ||||||| |||||||| | ||||||||||| ||| || Sbjct 851 TAAGTGTTCAAAACAAGCTTGTGAATGTGGATGAGAGCATTTACATACCAATTACTCGAG 910 Query 711 CAGAGTTTGCTGTTCTTATCTCTGCTTTCAACTTCGTCTTGCCGCACCTTATAGGCTGGA 770 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct 911 CAGAGTTTGCTGTTCTTATCTCTGCATTCAATTTTGTCTTGCCTTACCTTATAGGCTGGC 970 Query 771 GTGCATTTGCTAACTCCATCAAACCAGAAGACTCTAACCGCCTTAACAATGCTTCGCCTA 830 ||||||||| |||||||||||||||||||| | | ||| | ||||| |||||||||| Sbjct 971 ATGCATTTGCAAACTCCATCAAACCAGAAGAGACAAGCCGTGTGAACAACGCTTCGCCTA 1030 Query 831 AGTATGGAGGAGACTACGAATGGAGTAGATGATGGAGATTAG 872 | |||||||||||||| ||||||| ||||||||| | |||| Sbjct 1031 ACTATGGAGGAGACTATGAATGGAATAGATGATGAATCTTAG 1072 >AT2G02740.1 on lcl|Jm3D| AT2G02740.1 on lcl|Jm3D Length=39900371 Score = 100 bits (110), Expect = 3e-19 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 381 CTTTGGAATCTGGTGCGTTCAAGCTGACAAAGGAAGGTTTTTTGTTGCTCCAATTTGCTC 440 || || | || || || ||||| || | |||||||||||| || |||| || ||||||| Sbjct 12668817 CTATGCAGTCAGGGGCATTCAAACTCTCCAAGGAAGGTTTTGTGCTGCTTCAGTTTGCTC 12668758 Query 441 CTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGGAAGCAGGT 483 |||| |||||||| |||||||||||||||| || |||||||| Sbjct 12668757 CTGCTGCTGGTGTACGTCAATATGATTGGAACAGAAAGCAGGT 12668715 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 485 TTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAATCATGT 544 ||||| | || || || ||||| || ||||||||||||||||| | ||||| || ||| Sbjct 12667741 TTCTCACTATCAGTGACGGAAATTGGAAATCTAGTTAGCCTTGGCACAAGGGATTCGTGT 12667682 Query 545 GAATTCTTCCATGATCCATTCAAGGG-AAAAGGTA 578 ||||| || |||||||| || ||||| |||||||| Sbjct 12667681 GAATTTTTTCATGATCCTTTTAAGGGAAAAAGGTA 12667647 Score = 82.4 bits (90), Expect = 9e-14 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 578 AGTGATGAAGGTAAAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGC 637 ||||| || || || || ||||| |||||||| || ||||| || ||||| ||||||||| Sbjct 12666772 AGTGAGGAGGGGAAGGTCAGGAAGGTGTTGAAGGTGGAGCCTCTTCCAGACGGTTCTGGC 12666713 Query 638 CGCTTCTTTAACCTGAGT 655 | |||||||||||| ||| Sbjct 12666712 CACTTCTTTAACCTCAGT 12666695 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 13061328 TTCATTAAGAAG-AATCAATTACAATTTTG 13061356 >AT2G02740.1 on lcl|Jm3S| AT2G02740.1 on lcl|Jm3S Length=27832763 Score = 73.4 bits (80), Expect = 4e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 578 AGTGATGAAGGTAAAGTGAGGAAAGTGTTGAAAGTTGAGCCGCTCCCAGATGGTTCTGGC 637 |||||||| || || || ||||| ||||||||||| ||||| | || || ||||||||| Sbjct 18853699 AGTGATGAGGGAAAGGTCAGGAAGGTGTTGAAAGTGGAGCCTTTTCCCGACGGTTCTGGC 18853758 Query 638 CGCTTCTTTAACCTGAGT 655 | ||||||||| | ||| Sbjct 18853759 CATTTCTTTAACTTAAGT 18853776 Score = 68.0 bits (74), Expect = 2e-09 Identities = 66/85 (78%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 399 TCAAGCTGACAAAGGAAGGTTTTTTGTTGCTCCAATTTGCTCCTGCAGCTGGTGTTCGTC 458 |||| || | |||||||||||| || | || || |||||||||||| | |||||| Sbjct 18848813 TCAAACTCTCCAAGGAAGGTTTTGTGCTACTTCAGTTTGCTCCTGCAATGGCTGTTCGAT 18848872 Query 459 AATATGATTGGAGTAGGAAGCAGGT 483 ||| |||||||| || |||||||| Sbjct 18848873 AATGTGATTGGAACAGAAAGCAGGT 18848897 Score = 68.0 bits (74), Expect = 2e-09 Identities = 72/95 (76%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 480 AGGTCTTCTCGTTGTCGGTTACAGAAATCGGTAATCTAGTTAGCCTTGGGCCGAGGGAAT 539 |||| |||||| | || || | ||||| || | ||| ||||||||||| | ||||| | Sbjct 18853371 AGGTATTCTCGCTATCAGTGATGGAAATTGGAACTCTTGTTAGCCTTGGCACTAGGGATT 18853430 Query 540 CATGTGAATTCTTCCATGATCCATTCAAGGGAAAA 574 | |||||||| | |||| || || ||||||||| Sbjct 18853431 CGTGTGAATTTCTTCATGGTCGTTTTAAGGGAAAA 18853465 Score = 57.2 bits (62), Expect = 3e-06 Identities = 64/82 (78%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 307 ATTTTACGTGGGTCATTCGATTTACAAAGGGAAAGCTGCTCTTACGATAGA-ACCACGAG 365 ||||| |||||||| || || ||||||||||| || | |||||| |||| |||| ||| Sbjct 18848390 ATTTT--GTGGGTCACTCAATATACAAAGGGAAGGCAGTCCTTACGGTAGAGACCA-GAG 18848446 Query 366 CACCAGAGTTTGTGGCTTTGGA 387 | || ||||| | ||||||| Sbjct 18848447 CTCCTGAGTTCACGCCTTTGGA 18848468 Score = 37.4 bits (40), Expect = 3.2 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 13 CGGTGAAGAAGACGAAGAAGCATTGAGA 40 || ||||||||| || |||||||||||| Sbjct 6949162 CGATGAAGAAGAGGATGAAGCATTGAGA 6949189 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 9104217 TTCATTAAGAAG-AATCAATTACAATTTTG 9104189 Score = 37.4 bits (40), Expect = 3.2 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 177 GAAAAATTATTCCTTTAAAA 196 |||||||||||||||||||| Sbjct 19997963 GAAAAATTATTCCTTTAAAA 19997944 >AT2G02740.1 on lcl|Jm6S| AT2G02740.1 on lcl|Jm6S Length=22373256 Score = 42.8 bits (46), Expect = 0.076 Identities = 38/48 (79%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 547 ATTCTTCCATGATCCATTCAAGGGAAAAGGTAGTGATGAAGGTAAAGT 594 ||| || || || ||| ||| |||||| ||||||||||||| || || Sbjct 8539978 ATTGTTTCAAGAGGCATGCAAAGGAAAATGTAGTGATGAAGGAAATGT 8540025 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 129 CTCGTTTTCTCTCTTCTCACTCAATTCTCA 158 ||||||| |||||||||||||| |||||| Sbjct 5430767 CTCGTTT-CTCTCTTCTCACTCGTTTCTCA 5430795 >AT2G02740.1 on lcl|Jm2D| AT2G02740.1 on lcl|Jm2D Length=43614719 Score = 41.0 bits (44), Expect = 0.26 Identities = 27/30 (90%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 99 AAACCTTCATAAACCATAAGTTTTCAGATG 128 ||||||||||| | ||||| |||||||||| Sbjct 17246208 AAACCTTCATACAACATAAATTTTCAGATG 17246179 Score = 37.4 bits (40), Expect = 3.2 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 953 AGATAGAGAACGGAAAGAAAAGCAG 977 ||||||||||||||||||| || || Sbjct 25397016 AGATAGAGAACGGAAAGAAGAGAAG 25396992 Score = 37.4 bits (40), Expect = 3.2 Identities = 32/37 (86%), Gaps = 2/37 (5%) Strand=Plus/Plus Query 1055 TCTGTATT-CATTCAAAAGCAATCAATTACAATTTTG 1090 |||||||| |||| | ||| | ||||||||||||||| Sbjct 39225394 TCTGTATTTCATTAAGAAGTA-TCAATTACAATTTTG 39225429 >AT2G02740.1 on lcl|Jm8D| AT2G02740.1 on lcl|Jm8D Length=36225362 Score = 39.2 bits (42), Expect = 0.92 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Minus Query 456 GTCAATATGATTGGAGTAGGAAGCAGGTCTT 486 |||||||||||||||||| |||| || |||| Sbjct 24870979 GTCAATATGATTGGAGTATGAAG-AGCTCTT 24870950 Score = 37.4 bits (40), Expect = 3.2 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 713 GAGTTTGCTGTTCTTATCTCTGCTTTCAACTTC 745 |||||| |||||| | |||| ||||||||||| Sbjct 4498492 GAGTTTTCTGTTCGTTTCTCCACTTTCAACTTC 4498524 Score = 37.4 bits (40), Expect = 3.2 Identities = 36/45 (80%), Gaps = 5/45 (11%) Strand=Plus/Minus Query 17 GAAGAAGACGAAGAAG--CATTGAGAGTGA---AAAGAAAAACAA 56 |||||||||||||||| || | ||||| | ||||||||| || Sbjct 9993814 GAAGAAGACGAAGAAGAACAATAAGAGTTAAACAAAGAAAAATAA 9993770 >AT2G02740.1 on lcl|Jm7D| AT2G02740.1 on lcl|Jm7D Length=26765518 Score = 39.2 bits (42), Expect = 0.92 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 961 AACGGAAAGAAAAGCAGCAGCAGAGACTG 989 || ||||| ||||||||||||||||| || Sbjct 2063983 AATGGAAATAAAAGCAGCAGCAGAGAGTG 2063955 Score = 39.2 bits (42), Expect = 0.92 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1067 CAAAAGCAATCAATTACAATTTTG 1090 ||||||||||||| |||||||||| Sbjct 17377928 CAAAAGCAATCAAATACAATTTTG 17377951 Score = 37.4 bits (40), Expect = 3.2 Identities = 35/41 (85%), Gaps = 4/41 (10%) Strand=Plus/Minus Query 17 GAAGAA-GACGAA-GAAGCATTGAGAGTGAAAAGAAAAACA 55 |||||| ||| || |||||| |||| |||||||||||||| Sbjct 20902928 GAAGAAAGACTAATGAAGCA--GAGAATGAAAAGAAAAACA 20902890 >AT2G02740.1 on lcl|Jm4S| AT2G02740.1 on lcl|Jm4S Length=27577207 Score = 39.2 bits (42), Expect = 0.92 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 782 AACTCCATCAAACCAGAAGACTCTAA 807 ||||||||||||||| ||| |||||| Sbjct 18645707 AACTCCATCAAACCACAAGCCTCTAA 18645682 >AT2G02740.1 on lcl|Jm6D| AT2G02740.1 on lcl|Jm6D Length=38364907 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 584 GAAGGTAAAGTGAGGAAAGTGTTGAAAGTT 613 ||| |||||||||||||| ||||||| ||| Sbjct 1502188 GAATGTAAAGTGAGGAAA-TGTTGAATGTT 1502160 Score = 37.4 bits (40), Expect = 3.2 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 16 TGAAGAAGACGAAGAAGCATTGAGA 40 ||||||||| || |||||||||||| Sbjct 10702466 TGAAGAAGAGGATGAAGCATTGAGA 10702490 Score = 37.4 bits (40), Expect = 3.2 Identities = 31/36 (86%), Gaps = 3/36 (8%) Strand=Plus/Plus Query 127 TGCTCGTTTTCTCTCTTCTCACTCAAT--TCTCACC 160 ||||| ||||||||||||||||| | | ||||||| Sbjct 34266291 TGCTC-TTTTCTCTCTTCTCACTAATTTGTCTCACC 34266325 Score = 37.4 bits (40), Expect = 3.2 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 10 CCGCGGTGAAGAAGACGAAGAAG 32 ||||||||||||||| ||||||| Sbjct 36493405 CCGCGGTGAAGAAGAAGAAGAAG 36493383 >AT2G02740.1 on lcl|Jm5S| AT2G02740.1 on lcl|Jm5S Length=32113326 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 21824236 TTCATTAAGAAG-AATCAATTACAATTTTG 21824208 Score = 37.4 bits (40), Expect = 3.2 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 28 AGAAGCATTGAGAGTGAAAAGAAAA 52 |||| || ||||||||||||||||| Sbjct 22765238 AGAAACAATGAGAGTGAAAAGAAAA 22765262 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 27989023 TTCATTAAGAAG-AATCAATTACAATTTTG 27989051 Score = 37.4 bits (40), Expect = 3.2 Identities = 28/32 (88%), Gaps = 2/32 (6%) Strand=Plus/Plus Query 2 TCGTAATCCCGCGGTG--AAGAAGACGAAGAA 31 |||||||||||||||| | |||| ||||||| Sbjct 28955744 TCGTAATCCCGCGGTGGCACGAAGCCGAAGAA 28955775 >AT2G02740.1 on lcl|Jm5D| AT2G02740.1 on lcl|Jm5D Length=35798223 Score = 37.4 bits (40), Expect = 3.2 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 30 AAGCATTGAGAGTGAAAAGAAAAACAA 56 |||||||||||| ||||| |||||||| Sbjct 7856042 AAGCATTGAGAGGGAAAA-AAAAACAA 7856067 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 9306615 TTCATTAAGAAG-AATCAATTACAATTTTG 9306643 Score = 37.4 bits (40), Expect = 3.2 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 13 CGGTGAAGAAGACGAAGAAG 32 |||||||||||||||||||| Sbjct 17548258 CGGTGAAGAAGACGAAGAAG 17548239 Score = 37.4 bits (40), Expect = 3.2 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 473 AGGAAGCAGGTCTTCTCGTTGTCGG 497 |||||| ||| |||||||||||||| Sbjct 35466420 AGGAAGAAGGCCTTCTCGTTGTCGG 35466444 >AT2G02740.1 on lcl|Jm4D| AT2G02740.1 on lcl|Jm4D Length=35629462 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 213134 TTCATTAAGAAG-AATCAATTACAATTTTG 213106 >AT2G02740.1 on lcl|Jm2S| AT2G02740.1 on lcl|Jm2S Length=34707362 Score = 37.4 bits (40), Expect = 3.2 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 133 TTTTCTCTCTTCTCACTCAATTCTCAC 159 ||||||| |||||||||||||| |||| Sbjct 7146217 TTTTCTCCCTTCTCACTCAATT-TCAC 7146242 >AT2G02740.1 on lcl|Jm1D| AT2G02740.1 on lcl|Jm1D Length=49856174 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Plus Query 27 AAGAAGCATTGAGAGTGAAAAGAAAAACAA 56 ||||| |||| ||||||||||||||| ||| Sbjct 1431460 AAGAA-CATTTAGAGTGAAAAGAAAATCAA 1431488 Score = 37.4 bits (40), Expect = 3.2 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 23 GACGAAGAAGCATTGAGAGTGAAAAGAAAAACA 55 |||||| || |||||| | ||||||||||| || Sbjct 23923847 GACGAATAATCATTGATATTGAAAAGAAAAGCA 23923815 Score = 37.4 bits (40), Expect = 3.2 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1061 TTCATTCAAAAGCAATCAATTACAATTTTG 1090 |||||| | ||| ||||||||||||||||| Sbjct 31101246 TTCATTAAGAAG-AATCAATTACAATTTTG 31101218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566430754507 Database: ./data/162571409133.blastagainst.txt Posted date: Jul 7, 2021 8:14 PM Number of letters in database: 3,569 Number of sequences in database: 3 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2