BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jm3101_genome.fa 154 sequences; 527,895,757 total letters Query= Length=1844 Score E Sequences producing significant alignments: (Bits) Value lcl|Jm3D 228 2e-57 lcl|Jm8S 201 2e-49 lcl|Jm3S 187 5e-45 lcl|Jm7S 140 6e-31 lcl|Jm4D 127 4e-27 lcl|Jm4S 62.6 1e-07 lcl|Jm2D 48.2 0.003 lcl|Jm5D 42.8 0.13 lcl|Jm1D 42.8 0.13 lcl|Jm8D 41.0 0.45 lcl|Jm5S 41.0 0.45 lcl|Jm7D 39.2 1.6 lcl|JmScfU0001 37.4 5.4 lcl|Jm6S 37.4 5.4 lcl|Jm6D 37.4 5.4 lcl|Jm1S 37.4 5.4 >Query1 on lcl|Jm3D| Query1 on lcl|Jm3D Length=39900371 Score = 228 bits (252), Expect = 2e-57 Identities = 183/221 (83%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 1172 GGAAAATACACACCACAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACG 1231 || |||||||| || || ||||||||||| ||| |||| || ||||| |||||||| || Sbjct 5459449 GGTAAATACACCCCTCAATACCAATGGCTTGAACAGGAATTGCCAAAAGTTAACAGGACT 5459390 Query 1232 GAAACTCCGTGGTTGATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTACCAT 1291 || || || |||||||||||||| |||||||| || ||||| || ||||| | || ||| Sbjct 5459389 GAGACACCTTGGTTGATTGTTCTAATGCATTCCCCCTGGTATAATAGCTACAACTATCAT 5459330 Query 1292 TACATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAAAGTA 1351 || ||||| || ||||| ||||| ||||||||||||| |||||||| ||||||||||| Sbjct 5459329 TATATGGAGGGGGAAACCATGAGAGTAATGTATGAGGGATGGTTTGTGAAGTACAAAGTT 5459270 Query 1352 GATGTAGTTTTTGCAGGTCATGTCCACGCCTACGAAAGATC 1392 ||||| || |||||||||||||| ||||| || ||| |||| Sbjct 5459269 GATGTGGTATTTGCAGGTCATGTTCACGCTTATGAACGATC 5459229 Score = 127 bits (140), Expect = 4e-27 Identities = 102/123 (83%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 1393 GGAACGTGTATCAAACATAGCTTACAATGTTGTTAACGGCATTTGCACTCCAGTCAAAGA 1452 ||| |||||||| ||| | || ||||||||||| || || ||||| ||||| || || || Sbjct 5458908 GGAGCGTGTATCCAACGTTGCATACAATGTTGTAAATGGTATTTGTACTCCTGTAAAGGA 5458849 Query 1453 TCAATCAGCTCCAGTCTATATCACCATTGGTGATGGAGGCAATATTGAGGGCTTGGCTAC 1512 |||||||||||| || || || |||||||| |||||||| ||| |||| |||||||| || Sbjct 5458848 TCAATCAGCTCCTGTATACATAACCATTGGCGATGGAGGGAATCTTGAAGGCTTGGCAAC 5458789 Query 1513 CAA 1515 ||| Sbjct 5458788 CAA 5458786 Score = 114 bits (126), Expect = 2e-23 Identities = 159/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Minus Query 803 GGGGATCTTGGGCAGAGTTATGACTCAAACATAACCTTAACACATTATGAGAATAACCCA 862 ||||||||||| ||||||| ||| ||||||| || | || ||||| ||| ||||| Sbjct 5460282 GGGGATCTTGGTCAGAGTTTTGATTCAAACAAGACTCTTACTCATTACGAGTTAAACCCG 5460223 Query 863 ACAAAAGGGCAAGCGGTTTTGTTCGTCGGCGATATCTCATACGCTGATACTTATCCGGAT 922 |||||| || |||| ||||| || || ||| | || ||||| |||| Sbjct 5460222 CAGAAAGGGAAAACGGTGTTGTTTGTTGGGGATCTTTCTTACGCAGATA----------- 5460174 Query 923 CATGACAATAGGAGATGGGACAGTTGGGGAAGATTTGCTGAAAGAAGCACAGCTTATCAG 982 |||||||| |||||||| | |||||||| || | ||| ||||| |||||||| Sbjct 5460173 -ATGACAATGTTAGATGGGATACATGGGGAAGGTTCGTTGAGAGAAGTGTTGCTTATCAA 5460115 Query 983 CCTTGGATTTGGACTACCGGAAACCATGAACTCGATTTTGCCCCG 1027 || ||||| |||||| | || || || || | |||||| |||| Sbjct 5460114 CCATGGATATGGACTGCAGGGAATCACGAGTTAGATTTTAACCCG 5460070 Score = 111 bits (122), Expect = 3e-22 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 489 AGGTGCATATAACACAAGGAGATGTAGAAGGAAAGGCAGTGATAGTATCATGGGTGACAC 548 |||| || |||||||||||||| | || ||||||||| |||| ||||||||||| Sbjct 5461152 AGGTCCACATAACACAAGGAGACCATGTGGGGAAGGCAGTGCTAGTGTCATGGGTGACTG 5461093 Query 549 AAGAAGCAAAAGGATCTAACAAAGTCATTTACTGGAAAGAGAATAGCACCAAAAAGCACA 608 | | | ||| || || | || ||||| ||||| || ||||||| ||||| | Sbjct 5461092 TGAATGAACCAGGTTCGAATACCGTGATTTATTGGAATGAAAATAGCAAGGAAAAGAAAC 5461033 Query 609 AAGCTCATGGCAAAACCAATACTTACAAGTTCTACAATTATACTTCTGGTTTTATCCATC 668 | ||| | |||||| | ||| || |||||||||||||| || |||||||| || |||| Sbjct 5461032 AGGCTGAAGGCAAAGTTACTACCTATAAGTTCTACAATTACACCTCTGGTTTCATTCATC 5460973 Query 669 ATTGCCCTATCAGAAACTT 687 | | |||| |||||| Sbjct 5460972 ACACGACAATCATAAACTT 5460954 Score = 84.2 bits (92), Expect = 4e-14 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1517 ATGACTGAGCCTCAGCCTAAGTACTCTGCCTTTAGAGAAGCAAGCTTCGGGCATGCTATA 1576 ||||| || || |||||| || || || | | | || || || || || ||||| | Sbjct 5458686 ATGACAGAACCACAGCCTGCATATTCAGCTTATCGTGAGGCCAGTTTTGGTCATGCCACC 5458627 Query 1577 TTCTCGATAAAGAACAGGACGCATGCTCACTATGGATGGCATAGGAACCATGATGGTTAT 1636 || || |||||| | || |||||| |||| | ||||| | || || ||||| ||| Sbjct 5458626 TTTGATATCAAGAACCGAACCCATGCTTACTACAGTTGGCACCGTAATCAAGATGGATAT 5458567 Query 1637 GCTGTGGAGGGTGACAGAATGTGGTTTTATAACAGATTTTGGCATCCTGTTGATGATTC 1695 || ||||| | || |||||||||| ||||||| ||| || | ||||||||||| Sbjct 5458566 GCGGTGGAAGCAGATTCTATGTGGTTTTTCAACAGATACTGGAATTCAGTTGATGATTC 5458508 Score = 68.0 bits (74), Expect = 3e-09 Identities = 85/115 (74%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 380 TGTAATGGAGGCATCACCAGTAGATATGTCAGAAAATT--AGAAGCAACCGTTGATATGC 437 ||||||||||| | || || | | ||| |||||| | ||||| | | |||||| Sbjct 5461533 TGTAATGGAGGGAAGACGAGCACTTTTGTGAGAAAAGTTGAGAAGGCTCAGC--ATATGC 5461476 Query 438 CTCTTGATAGCGATGTTTTTCGTGTTCCTTGTGGCTACAATGCTCCTCAACAGGT 492 |||| ||||||||||| ||||| | || ||||| ||||| ||||||||||| Sbjct 5461475 CTCTGGATAGCGATGTCTTTCGAATCCCACCCGGCTATAATGCACCTCAACAGGT 5461421 Score = 62.6 bits (68), Expect = 1e-07 Identities = 79/109 (72%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 696 ACACCAAGTACTATTATGTGTTAGGTGTGGGACAAACGGAGCGTAAGTTTTGGTTCTTCA 755 ||||||| ||||| || ||| | || | || || || || |||| ||||| | | Sbjct 5460755 ACACCAAATACTACTACGTGGTTGGGATTGGGCACACTCCACGGCAGTTCTGGTTTATAA 5460696 Query 756 CTCCTCCTGAGATCGGTCCTGATGTTCCCTACACTTTTGGTCTCATTGG 804 |||| ||||| | || |||||||| || || || ||||||||||| || Sbjct 5460695 CTCCCCCTGAAGTTGGCCCTGATGTGCCTTATACATTTGGTCTCATAGG 5460647 Score = 39.2 bits (42), Expect = 1.6 Identities = 27/30 (90%), Gaps = 2/30 (7%) Strand=Plus/Minus Query 280 AATaaaaaaaaaaTCTCAGAATCCAAAAAT 309 |||||||||||||| ||||||||||||| Sbjct 37910532 AATAAAAAAAAAATA--AGAATCCAAAAAT 37910505 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 241 TTTTTCTCCCTTTGTTTATCGGAAA 265 ||||||| | ||||||||||||||| Sbjct 941581 TTTTTCTTCTTTTGTTTATCGGAAA 941557 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 88 AAAACCAAAGTTAAAGAAATAGAAT 112 ||||||||||| ||||||| ||||| Sbjct 6364476 AAAACCAAAGTAAAAGAAAGAGAAT 6364452 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 593 AGCACCAAAAAGCACAAAGC 612 |||||||||||||||||||| Sbjct 13332520 AGCACCAAAAAGCACAAAGC 13332539 Score = 37.4 bits (40), Expect = 5.4 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 271 TCTCTTTCGAATaaaaaaaaaaT 293 ||||||||||| ||||||||||| Sbjct 14881705 TCTCTTTCGAAAAAAAAAAAAAT 14881727 Score = 37.4 bits (40), Expect = 5.4 Identities = 33/40 (83%), Gaps = 1/40 (3%) Strand=Plus/Minus Query 1725 GGAATAGGATTTGTTGTATCTCTA-TGATTGAACAACCAT 1763 |||| |||||||||||||| ||| || | |||||| ||| Sbjct 22189277 GGAACAGGATTTGTTGTATTACTATTGTTCGAACAATCAT 22189238 Score = 37.4 bits (40), Expect = 5.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1744 CTCTATGATTGAACAACCATCCAAATAAAT 1773 ||| || ||| |||||||||||||| |||| Sbjct 28747825 CTCCATTATTTAACAACCATCCAAAAAAAT 28747796 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 77 CAAACAATACAAAAACCAAA-GTTAAAGAAATAGAAT 112 |||||||||||||| ||||| ||||| |||| ||| Sbjct 35968157 CAAACAATACAAAACCCAAATATTAAAATAATACAAT 35968193 >Query1 on lcl|Jm8S| Query1 on lcl|Jm8S Length=19962766 Score = 201 bits (222), Expect = 2e-49 Identities = 170/209 (81%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 1175 AAATACACACCACAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACGGAA 1234 ||||| ||||| || ||| |||||||| ||||||| | || || ||||| || || || Sbjct 356859 AAATATACACCTCAATACAAATGGCTCAAAGAGGAACTACCGAAAGTTAATAGGACCGAG 356918 Query 1235 ACTCCGTGGTTGATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTACCATTAC 1294 || || |||||||||||||| |||||||| || ||||| || |||||| | || ||||| Sbjct 356919 ACACCTTGGTTGATTGTTCTTATGCATTCCCCTTGGTATAATAGCTATAACTATCATTAT 356978 Query 1295 ATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAAAGTAGAT 1354 ||||| || ||| | ||||| ||||||| ||||||||||||||| ||||||||||| ||| Sbjct 356979 ATGGAGGGGGAAGCCATGAGAGTAATGTTTGAGGCTTGGTTTGTGAAGTACAAAGTTGAT 357038 Query 1355 GTAGTTTTTGCAGGTCATGTCCACGCCTA 1383 || || ||||| |||||||| || || || Sbjct 357039 GTTGTATTTGCTGGTCATGTTCATGCTTA 357067 Score = 71.6 bits (78), Expect = 3e-10 Identities = 93/129 (72%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 897 TCTCATACGCTGATACTTATCCGGATCATGACAATAGGAGATGGGACAGTTGGGGAAGAT 956 ||||||| || || | ||||| ||||||||||| |||||||| | |||| ||| | Sbjct 355262 TCTCATATGCAGACAACTATCCCAATCATGACAATGTTAGATGGGATACATGGGAAAGGT 355321 Query 957 TTGCTGAAAGAAGCACAGCTTATCAGCCTTGGATTTGGACTACCGGAAACCATGAACTCG 1016 | | || ||||| ||||| || || ||||| |||||| | || || || || | | Sbjct 355322 TCGTCGAGAGAAGTGTTGCTTAACAACCATGGATATGGACTGCAGGTAATCACGAGTTAG 355381 Query 1017 ATTTTGCCC 1025 |||| |||| Sbjct 355382 ATTTCGCCC 355390 Score = 51.8 bits (56), Expect = 2e-04 Identities = 54/71 (76%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1106 CCATTCTGGTACTCGATAAAGAGAGGACCGGCTTACATAATCGTGCTAGCTTCATATTCA 1165 || || ||||| || || ||||||| | ||||||| || ||| | ||||||||||| Sbjct 356121 CCCTTTTGGTATTCAATCAAGAGAGCTTCAACTTACATCATAGTGTTGTCTTCATATTCA 356180 Query 1166 GCATATGGAAA 1176 ||||| || || Sbjct 356181 GCATACGGTAA 356191 Score = 39.2 bits (42), Expect = 1.6 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1585 AAAGAACAGGACGCATGCTCACTATG 1610 |||||||| |||||||||||| |||| Sbjct 12516915 AAAGAACAAGACGCATGCTCAGTATG 12516940 Score = 37.4 bits (40), Expect = 5.4 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 279 GAATaaaaaaaaaaTCTCAGAATCCAAAAA 308 ||||||||| | ||| |||||||||||||| Sbjct 1940509 GAATAAAAAGATAAT-TCAGAATCCAAAAA 1940481 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 9 CAGATAATTAAAAATAAATATCCAA 33 |||||| ||||| |||||||||||| Sbjct 15139797 CAGATATTTAAATATAAATATCCAA 15139773 >Query1 on lcl|Jm3S| Query1 on lcl|Jm3S Length=27832763 Score = 187 bits (206), Expect = 5e-45 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1172 GGAAAATACACACCACAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACG 1231 || ||||| || || || ||| |||||| |||||||| | || || ||||| || || Sbjct 24071713 GGTAAATATACGCCTCAATACACATGGCTTGAAGAGGAACTACCGAAAGTTAATAGGACC 24071772 Query 1232 GAAACTCCGTGGTTGATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTACCAT 1291 || || || ||| |||||||||| | |||||| || ||||| || |||||| | || ||| Sbjct 24071773 GAGACACCTTGGCTGATTGTTCTCACGCATTCCCCTTGGTATAATAGCTATAACTATCAT 24071832 Query 1292 TACATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAAAGTA 1351 || ||||| || ||||| ||||| ||||||| |||||| |||||||| ||||||||||| Sbjct 24071833 TATATGGAGGGGGAAACCATGAGAGTAATGTTTGAGGCCTGGTTTGTGAAGTACAAAGTT 24071892 Query 1352 GATGTAGTTTTTGCAGGTCATGTCCACGCCTACGAAAGATC 1392 ||||| || ||||| |||||||| || || || || |||| Sbjct 24071893 GATGTGGTATTTGCTGGTCATGTTCATGCTTATGAGCGATC 24071933 Score = 149 bits (164), Expect = 1e-33 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 803 GGGGATCTTGGGCAGAGTTATGACTCAAACATAACCTTAACACATTATGAGAATAACCCA 862 ||||||||||| ||||||| ||| ||||||| || | || ||||| ||| |||||| Sbjct 24070067 GGGGATCTTGGTCAGAGTTTTGATTCAAACAGGACGCTTACTCATTACGAGTTAAACCCA 24070126 Query 863 ACAAAAGGGCAAGCGGTTTTGTTCGTCGGCGATATCTCATACGCTGATACTTATCCGGAT 922 |||||| || |||| ||||| || || || |||| || || || | ||||| || Sbjct 24070127 CAGAAAGGGAAAACGGTGTTGTTTGTTGGGGACCTCTCTTATGCAGACAACTATCCAAAT 24070186 Query 923 CATGACAATAGGAGATGGGACAGTTGGGGAAGATTTGCTGAAAGAAGCACAGCTTATCAG 982 ||||||||| |||||||| | |||||||| || || ||||| || ||||| Sbjct 24070187 CATGACAATGTTAGATGGGATACATGGGGAAGGTTCATCGAGAGAAGTGTTGCATATCAA 24070246 Query 983 CCTTGGATTTGGACTACCGGAAACCATGAACTCGATTTTGCCCCGGAGAT 1032 || ||||| |||||| | || || || || || ||||||||||||||||| Sbjct 24070247 CCATGGATATGGACTGCAGGGAATCACGAGCTAGATTTTGCCCCGGAGAT 24070296 Score = 118 bits (130), Expect = 2e-24 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 1393 GGAACGTGTATCAAACATAGCTTACAATGTTGTTAACGGCATTTGCACTCCAGTCAAAGA 1452 |||||||||||| ||||| || |||||||| || || || |||||||| || || | ||| Sbjct 24072165 GGAACGTGTATCCAACATTGCCTACAATGTCGTAAATGGTATTTGCACACCTGTAAGAGA 24072224 Query 1453 TCAATCAGCTCCAGTCTATATCACCATTGGTGATGGAGGCAATATTGAGGGCTTGGCTAC 1512 ||||||||| || || || || ||||||||||||||||| || | || ||||| || || Sbjct 24072225 TCAATCAGCGCCTGTATACATAACCATTGGTGATGGAGGGAACCTCGAAGGCTTAGCAAC 24072284 Query 1513 CAA 1515 ||| Sbjct 24072285 CAA 24072287 Score = 109 bits (120), Expect = 1e-21 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 1513 CAAAATGACTGAGCCTCAGCCTAAGTACTCTGCCTTTAGAGAAGCAAGCTTCGGGCATGC 1572 || |||||| || || ||||| ||||||| || | | | || |||||||| || ||||| Sbjct 24072385 CAGAATGACCGAACCACAGCCAGAGTACTCAGCTTATCGTGAGGCAAGCTTTGGTCATGC 24072444 Query 1573 TATATTCTCGATAAAGAACAGGACGCATGCTCACTATGGATGGCATAGGAACCATGATGG 1632 | || || |||||| | || |||||| |||| | ||||| | || |||||||| Sbjct 24072445 CACTTTTGATATCAAGAACCGAACCCATGCTTACTACAGTTGGCACCGCAATCATGATGG 24072504 Query 1633 TTATGCTGTGGAGGGTGACAGAATGTGGTTTTATAACAGATTTTGGCATCCTGTTGATGA 1692 ||||| ||||| | || |||||||||| ||||||| ||| ||| |||||||| Sbjct 24072505 ATATGCAGTGGAAGCAGATTCCATGTGGTTTTTCAACAGATACTGGAGTCCAGTTGATGA 24072564 Query 1693 TTC 1695 ||| Sbjct 24072565 TTC 24072567 Score = 96.9 bits (106), Expect = 7e-18 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 489 AGGTGCATATAACACAAGGAGATGTAGAAGGAAAGGCAGTGATAGTATCATGGGTGACAC 548 |||| || |||||||| ||||| || |||||||| ||||| ||||||||||| Sbjct 24069375 AGGTTCACATAACACAGGGAGACCATTTTGGGAAGGCAGTCATAGTTTCATGGGTGACTG 24069434 Query 549 AAGAAGCAAAAGGATCTAACAAAGTCATTTACTGGAAAGAGAATAGCACCAAAAAGCACA 608 || | | || || | | ||| ||||| |||| || || |||| ||||| | Sbjct 24069435 TGGATGAACCGGGTTCCAGTACAGTGATTTATTGGAGTGAAAACAGCAAGGAAAAGAAAC 24069494 Query 609 AAGCTCATGGCAAAACCAATACTTACAAGTTCTACAATTATACTTCTGGTTTTATCCATC 668 | || | ||||||| |||| || |||||||||||||| ||||||||||| || |||| Sbjct 24069495 ATGCCGAAGGCAAAATTCATACCTATAAGTTCTACAATTACACTTCTGGTTTCATTCATC 24069554 Query 669 A 669 | Sbjct 24069555 A 24069555 Score = 68.0 bits (74), Expect = 3e-09 Identities = 66/83 (80%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 411 GAAAATT-AGAAGCAACCGTTGATATGCCTCTTGATAGCGATGTTTTTCGTGTTCCTTGT 469 |||| || ||||| || || ||||||||||| ||||||||||| |||| | ||| | Sbjct 24069165 GAAAGTTGAGAAG--ACTGTGGATATGCCTCTGGATAGCGATGTCTTTCAAATCCCTCCT 24069222 Query 470 GGCTACAATGCTCCTCAACAGGT 492 ||||| ||||| |||||||| || Sbjct 24069223 GGCTATAATGCACCTCAACAAGT 24069245 Score = 55.4 bits (60), Expect = 2e-05 Identities = 53/68 (78%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1106 CCATTCTGGTACTCGATAAAGAGAGGACCGGCTTACATAATCGTGCTAGCTTCATATTCA 1165 || || ||||| || || ||||||| | |||||||| || ||| | ||||||||||| Sbjct 24070992 CCCTTTTGGTATTCAATCAAGAGAGCTTCAGCTTACATCATAGTGTTGTCTTCATATTCA 24071051 Query 1166 GCATATGG 1173 ||||| || Sbjct 24071052 GCATACGG 24071059 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 21 AATAAATATCCAACCGTTCGTTAACA-TATTCCATAT 56 ||| ||||||||||| | |||||| | ||| |||||| Sbjct 1382618 AATTAATATCCAACCATCCGTTAAAATTATGCCATAT 1382582 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 21 AATAAATATCCAACCGTTCGTTAACA-TATTCCATAT 56 ||| ||||||||||| | |||||| | ||| |||||| Sbjct 1444076 AATTAATATCCAACCATCCGTTAAAATTATGCCATAT 1444040 >Query1 on lcl|Jm7S| Query1 on lcl|Jm7S Length=21889424 Score = 140 bits (154), Expect = 6e-31 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 1172 GGAAAATACACACCACAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACG 1231 || |||||||| || || ||| |||||| || ||||| || | || ||||| || | Sbjct 18698313 GGTAAATACACTCCTCAATACACTTGGCTCCAAAAGGAGCTCACCAAAGTTAATCGAGCT 18698372 Query 1232 GAAACTCCGTGGTTGATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTACCAT 1291 |||||||| ||| | || ||||| | || ||||||||||| |||||| | | |||||| Sbjct 18698373 GAAACTCCTTGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 18698432 Query 1292 TACATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAAAGTA 1351 || |||||||| |||| ||||| || | | ||| | |||||||| | |||||| Sbjct 18698433 TATATGGAAGGAGAAAGCATGAGAGTGACTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 18698492 Query 1352 GATGTAGTTTTTGCAGGTCATGTCCACGCCTACGA 1386 || | |||||||| |||||||| || ||||| || Sbjct 18698493 GACATTGTTTTTGCTGGTCATGTTCATGCCTATGA 18698527 Score = 89.7 bits (98), Expect = 1e-15 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 881 TTGTTCGTCGGCGATATCTCATACGCTGATACTTATCCGGATCATGACAATAGGAGATGG 940 ||||| || || ||| | || || || ||| | | || | ||||||||| ||||||| Sbjct 18697640 TTGTTTGTAGGTGATCTTTCTTATGCAGATGATCACCCAAACCATGACAATGAGAGATGG 18697699 Query 941 GACAGTTGGGGAAGATTTGCTGAAAGAAGCACAGCTTATCAGCCTTGGATTTGGACTACC 1000 |||| ||||| | ||| ||| | || | || |||||||| |||||||||||| | Sbjct 18697700 GACACATGGGGCCGCTTTATTGAGAAGAGTGCTGCGTATCAGCCATGGATTTGGACTGCT 18697759 Query 1001 GGAAACCATGAACTCGATTTTGCCCCGGAGATTG 1034 || || |||||||| |||| ||| || | |||| Sbjct 18697760 GGCAATCATGAACTTGATTATGCTCCACAAATTG 18697793 Score = 80.6 bits (88), Expect = 5e-13 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1520 ACTGAGCCTCAGCCTAAGTACTCTGCCTTTAGAGAAGCAAGCTTCGGGCATGCTATATTC 1579 ||||| || || || | || ||||| || | ||||||||||| ||||| || || | Sbjct 18698978 ACTGACCCACAACCAAGTTATTCTGCATTCCGGGAAGCAAGCTTTGGGCACGCAATTCTG 18699037 Query 1580 TCGATAAAGAACAGGACGCATGCTCACTATGGATGGCATAGGAACCATGATGGTTATGCT 1639 | |||||||| ||||| ||||| |||||| ||||| | ||||| ||| || ||||| Sbjct 18699038 GCTATAAAGAATAGGACCCATGCCCACTATACTTGGCACCGCAACCAAGATAGTAATGCT 18699097 Query 1640 GT 1641 || Sbjct 18699098 GT 18699099 Score = 46.4 bits (50), Expect = 0.011 Identities = 79/115 (69%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 690 AGTATGACACCAAGTACTATTATGTGTTAGGTGTGGGACAAACGGAGCGTAAGTTTTGGT 749 ||||||||||||| |||| ||||| | | || | || | | ||| |||| | Sbjct 18697054 AGTATGACACCAAATACTTTTATGAGATCGGGATTGGCGAGTGTGCCCGTCAGTTCCACT 18697113 Query 750 TCTTCACTCCTCCTGAGATCGGTCCTGATGTTCCCTACACTTTTGGTCTCATTGG 804 || |||||||| | | || || |||||||| ||||| ||||| | ||||| Sbjct 18697114 TCAGAACTCCTCCCAAAGTGGGGCCAGATGTTCCATACACATTTGGCATTATTGG 18697168 Score = 41.0 bits (44), Expect = 0.45 Identities = 34/41 (83%), Gaps = 3/41 (7%) Strand=Plus/Minus Query 268 ATCTCTCTTTCGAATaaaaaaaaaaTCTCAGAATCCAAAAA 308 || ||||||||||| |||||||||| |||| ||||||| Sbjct 16531207 ATTTCTCTTTCGAAAAAAAAAAAAA---AAGAAGCCAAAAA 16531170 Score = 41.0 bits (44), Expect = 0.45 Identities = 45/60 (75%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 611 GCTCATGGCAAAACCAATACTTACAAGTTCTACAATTATACTTCTGGTTTTATCCATCAT 670 |||| | ||||| || ||||||| | ||| | ||||||||||||| || |||||| Sbjct 18696783 GCTCCGGCCAAAATCACCTCTTACAAATACTATACATATACTTCTGGTTACATTCATCAT 18696842 Score = 37.4 bits (40), Expect = 5.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 82 AATACAAAAACCAAAGTTAAAGAAATAG 109 ||||||||||| | ||||||| |||||| Sbjct 6720553 AATACAAAAACTAGAGTTAAAAAAATAG 6720580 Score = 37.4 bits (40), Expect = 5.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 280 AATaaaaaaaaaaTCTCAGAATCCAAAAAT 309 || |||||||||||| | ||||||||||| Sbjct 13753811 AAAAAAAAAAAAATCCAAAAATCCAAAAAT 13753782 Score = 37.4 bits (40), Expect = 5.4 Identities = 49/68 (72%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1106 CCATTCTGGTACTCGATAAAGAGAGGACCGGCTTACATAATCGTGCTAGCTTCATATTCA 1165 ||| | ||||| || || ||| | | | | || |||| || || || |||| || ||| Sbjct 18698153 CCACTTTGGTATTCCATCAAGCGTGCATCTGCACACATCATTGTCCTCTCTTCTTACTCA 18698212 Query 1166 GCATATGG 1173 |||||||| Sbjct 18698213 GCATATGG 18698220 >Query1 on lcl|Jm4D| Query1 on lcl|Jm4D Length=35629462 Score = 127 bits (140), Expect = 4e-27 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 1172 GGAAAATACACACCACAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACG 1231 || |||||||| || || ||| |||||| || ||||| || | || ||||| || | Sbjct 7641596 GGTAAATACACTCCTCAATACACTTGGCTCAAACAGGAGCTCACCAAAGTTAATCGAGCT 7641655 Query 1232 GAAACTCCGTGGTTGATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTACCAT 1291 |||||||| ||| | || ||||| | || ||||||||||| |||||| | | |||||| Sbjct 7641656 GAAACTCCATGGCTTATAGTTCTTCTTCACTCACCATGGTATAACAGCAACAACTACCAT 7641715 Query 1292 TACATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAAAGTA 1351 | |||||||| |||| ||||| || | ||| | |||||||| | |||||| Sbjct 7641716 TTTATGGAAGGAGAAAGCATGAGAGTGGCTTTTGAATCCTGGTTTGTTGAAAGCAAAGTT 7641775 Query 1352 GATGTAGTTTTTGCAGGTCATGTCCACGCCTACGA 1386 || | || ||||| |||||||| || ||||| || Sbjct 7641776 GACATTGTGTTTGCCGGTCATGTTCATGCCTATGA 7641810 Score = 116 bits (128), Expect = 7e-24 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 803 GGGGATCTTGGGCAGAGTTATGACTCAAACATAACCTTAACACATTATGAGAATAACCCA 862 || |||||||| || | | |||| ||||| | || | || |||||||| |||||| Sbjct 27872657 GGTGATCTTGGTCAAACTCATGATTCAAATAGGACACTCACCCATTATGAATTAAACCCA 27872716 Query 863 ACAAAAGGGCAAGCGGTTTTGTTCGTCGGCGATATCTCATACGCTGATACTTATCCGGAT 922 |||||||| || ||| |||||||| || || |||| || || ||| ||||| Sbjct 27872717 ACAAAAGGCCAGATGGTATTGTTCGTTGGAGACCTCTCTTATGCAGATGACTATCCATTG 27872776 Query 923 CATGACAATAGGAGATGGGACAGTTGGGGAAGATTTGCTGAAAGAAGCACAGCTTATCAG 982 |||||||| | || ||||| | |||||||| || || |||| | |||||||| Sbjct 27872777 CATGACAACAACAGGTGGGATACATGGGGAAGGTTCATAGAGAGAAATGCTGCTTATCAA 27872836 Query 983 CCTTGGATTTGGACTACCGGAAACCATGAACTCGATTTTGCCCCGGA 1029 |||||| | |||||| | || || ||||| |||||| ||| || || Sbjct 27872837 CCTTGGGTATGGACTGCAGGCAATCATGAGATCGATTATGCTCCAGA 27872883 Score = 102 bits (112), Expect = 2e-19 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 881 TTGTTCGTCGGCGATATCTCATACGCTGATACTTATCCGGATCATGACAATAGGAGATGG 940 ||||| | || ||| | || || || ||| | | || ||||||||||| ||||||| Sbjct 7639872 TTGTTTGCGGGTGATCTTTCTTATGCAGATGATCACCCATATCATGACAATGAGAGATGG 7639931 Query 941 GACAGTTGGGGAAGATTTGCTGAAAGAAGCACAGCTTATCAGCCTTGGATTTGGACTACC 1000 |||| ||||| | ||| ||| | || | || |||||||| |||||||||||| | Sbjct 7639932 GACACATGGGGGCGGTTTATTGAGAAGAGTGCTGCGTATCAGCCATGGATTTGGACTGCT 7639991 Query 1001 GGAAACCATGAACTCGATTTTGCCCCGGAGATTG 1034 || || |||||||| ||||||||||| || |||| Sbjct 7639992 GGCAATCATGAACTTGATTTTGCCCCAGAAATTG 7640025 Score = 96.9 bits (106), Expect = 7e-18 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 1393 GGAACGTGTATCAAACATAGCTTACAATGTTGTTAACGGCATTTGCACTCCAGTCAAAGA 1452 ||||||| | ||||| || || ||||||||||| || || | |||||||| | | || Sbjct 27874785 GGAACGTTTTTCAAATATCGCATACAATGTTGTAAATGGGTTGTGCACTCCCATTAGTGA 27874844 Query 1453 TCAATCAGCTCCAGTCTATATCACCATTGGTGATGGAGGCAATATTGAGGGCTTGGCTAC 1512 ||||| ||||| || || || |||||||| |||||||| ||| |||| || |||| || Sbjct 27874845 CCAATCTGCTCCCGTTTACATAACCATTGGAGATGGAGGAAATCTTGAAGGACTGGCGAC 27874904 Query 1513 CAA 1515 ||| Sbjct 27874905 CAA 27874907 Score = 95.1 bits (104), Expect = 2e-17 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1517 ATGACTGAGCCTCAGCCTAAGTACTCTGCCTTTAGAGAAGCAAGCTTCGGGCATGCTATA 1576 ||||| ||||| ||||| | ||||| || | | ||||| ||||| || |||| || Sbjct 27875013 ATGACAGAGCCCCAGCCAAGCTACTCGGCTTACCGTGAAGCCAGCTTTGGTCATGGGATT 27875072 Query 1577 TTCTCGATAAAGAACAGGACGCATGCTCACTATGGATGGCATAGGAACCATGATGGTTAT 1636 || |||||||||||||| ||||| | | ||| |||||| | || || ||||| ||| Sbjct 27875073 TTAGACATAAAGAACAGGACTCATGCCTATTTTGGTTGGCATCGCAATCAAGATGGCTAT 27875132 Query 1637 GCTGTGGAGGGTGACAGAATGTGGTTTTATAACAGATTTTGGCATCC 1683 ||||| || | ||| | ||||| ||||||| ||||||||| Sbjct 27875133 GCTGTAGAAGCTGATTCTGTATGGTTGGCAAACAGATATTGGCATCC 27875179 Score = 86.0 bits (94), Expect = 1e-14 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1520 ACTGAGCCTCAGCCTAAGTACTCTGCCTTTAGAGAAGCAAGCTTCGGGCATGCTATATTC 1579 ||||| || || || | || ||||| || | ||||||||||| |||||||| | || Sbjct 7642168 ACTGACCCACAACCAAGTTATTCTGCATTCCGGGAAGCAAGCTTTGGGCATGCAACTCTC 7642227 Query 1580 TCGATAAAGAACAGGACGCATGCTCACTATGGATGGCATAGGAACCATGATGGTTATGCT 1639 | |||||||| ||||| ||||| |||||| ||||| | ||||| ||| || ||||| Sbjct 7642228 GCTATAAAGAATAGGACCCATGCCCACTATACTTGGCACCGTAACCAAGATAGTAATGCT 7642287 Query 1640 GT 1641 || Sbjct 7642288 GT 7642289 Score = 77.0 bits (84), Expect = 6e-12 Identities = 141/205 (69%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 489 AGGTGCATATAACACAAGGAGATGTAGAAGGAAAGGCAGTGATAGTATCATGGGTGACAC 548 ||||||||||||| ||||||||| |||||||||| ||||| || || ||||| ||| Sbjct 27871927 AGGTGCATATAACTCAAGGAGATCATGAAGGAAAGGGTGTGATTGTCTCTTGGGTTACAG 27871986 Query 549 AAGAAGCAAAAGGATCTAACAAAGTCATTTACTGGAAAGAGAATAGC--ACCAAAAAGCA 606 ||| | | || || | | ||| |||||||| || |||||| | |||||| Sbjct 27871987 CAGATGAACCCGGTTCAAGTACAGTGCTTTACTGGGCTGAAAATAGCCAGCTAAAAAG-- 27872044 Query 607 CAAAGCTCATGGCAAAACCAATACTTACAAGTTCTACAATTATACTTCTGGTTTTATCCA 666 | ||| |||| | ||| ||||||| |||||| || || |||| ||| || Sbjct 27872045 CCGGGCTGATGGTTTTATACGTACCTACAAGTATGTCAATTACACCTCCGGTTATATTCA 27872104 Query 667 TCATTGCCCTATCAGAAACTTAGAG 691 ||| ||| | || | || || ||| Sbjct 27872105 TCACTGCACCATTAACAATTTGGAG 27872129 Score = 69.8 bits (76), Expect = 9e-10 Identities = 62/78 (79%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 1437 GCACTCCAGTCAAAGATCAATCAGCTCCAGTCTATATCACCATTGGTGATGGAGGCAATA 1496 |||| ||| | ||||| ||||| || ||| | || || || ||||||||||| || |||| Sbjct 7641970 GCACGCCAATAAAAGACCAATCTGCACCAATATACATAACAATTGGTGATGGTGGTAATA 7642029 Query 1497 TTGAGGGCTTGGCTACCA 1514 |||||||| | |||| || Sbjct 7642030 TTGAGGGCATTGCTAACA 7642047 Score = 37.4 bits (40), Expect = 5.4 Identities = 37/48 (77%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 644 AATTATACTTCTGGTTTTATCCATCATTGCCCTATCAGAAACTTAGAG 691 |||||||||||||||| || |||||| | | || | || |||||| Sbjct 7639418 AATTATACTTCTGGTTACATTCATCATGCCACCATTAAAAGATTAGAG 7639465 Score = 37.4 bits (40), Expect = 5.4 Identities = 49/68 (72%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1106 CCATTCTGGTACTCGATAAAGAGAGGACCGGCTTACATAATCGTGCTAGCTTCATATTCA 1165 ||| | ||||| || || ||| | | | | || |||| || || || |||| || ||| Sbjct 7641385 CCACTTTGGTATTCCATTAAGCGTGCATCTGCACACATCATTGTCCTCTCTTCTTACTCA 7641444 Query 1166 GCATATGG 1173 |||||||| Sbjct 7641445 GCATATGG 7641452 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1318 AATGTATGAGGCTTGGTTTG 1337 |||||||||||||||||||| Sbjct 8176881 AATGTATGAGGCTTGGTTTG 8176900 Score = 37.4 bits (40), Expect = 5.4 Identities = 36/45 (80%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 569 AAAGTCATTTACTGGAA-AGAGAATAGCACCAAAAAGCACAAAGC 612 |||| |||| ||| | | |||||| ||||||||||| | ||| || Sbjct 11375256 AAAGCCATTCACTAGTAGAGAGAAGAGCACCAAAAAACGCAATGC 11375300 Score = 37.4 bits (40), Expect = 5.4 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1103 GAACCATTCTGGTACTCGATAAAGAGAGGACC 1134 |||| ||||||||||| ||||||| |||||| Sbjct 13867784 GAACAATTCTGGTACTTAATAAAGA-AGGACC 13867814 Score = 37.4 bits (40), Expect = 5.4 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Minus Query 80 ACAAT--ACAAAAACCAAAGTTAAAGAAATAGAATTTAA 116 ||||| |||||| |||||||||||| ||| |||| || Sbjct 19425031 ACAATCAACAAAATACAAAGTTAAAGACATATAATTAAA 19424993 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1245 TGATTGTTCTGATGCATTCA 1264 |||||||||||||||||||| Sbjct 26831088 TGATTGTTCTGATGCATTCA 26831069 >Query1 on lcl|Jm4S| Query1 on lcl|Jm4S Length=27577207 Score = 62.6 bits (68), Expect = 1e-07 Identities = 78/107 (73%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1288 CCATTACATGGAAGGTGAAACAATGAGGGTAATGTATGAGGCTTGGTTTGTCAAGTACAA 1347 ||| || ||||||||||||| ||| | | | | |||| ||||||||| || | Sbjct 1014223 CCACTATATGGAAGGTGAAAGTATGCGAGCTGTCTTTGAGAGATGGTTTGTCTGTTATAG 1014282 Query 1348 AGTAGATGTAGTTTTTGCAGGTCATGTCCACGCCTACGAAAGATCGG 1394 ||| ||| | || ||||| || || || || ||||| |||||||||| Sbjct 1014283 AGTTGATTTCGTATTTGCTGGGCACGTTCATGCCTATGAAAGATCGG 1014329 Score = 46.4 bits (50), Expect = 0.011 Identities = 37/45 (82%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 1451 GATCAATCAGCTCCAGTCTATATCACCATTGGTGATGGAGGCAAT 1495 ||| ||||||||||||| || || || |||| |||||||| ||| Sbjct 1015191 GATGAATCAGCTCCAGTGTACATAACTGTTGGAGATGGAGGAAAT 1015235 Score = 42.8 bits (46), Expect = 0.13 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 78 AAACAATACAAAAACCAAAGTTAAAGAAATAGA 110 |||||| |||||| |||| | |||||||||||| Sbjct 12702712 AAACAAAACAAAATCCAACGATAAAGAAATAGA 12702744 Score = 41.0 bits (44), Expect = 0.45 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1286 TACCATTACATGGAAGGTGAAACAA 1310 |||||||||||||| |||||||||| Sbjct 11999238 TACCATTACATGGATGGTGAAACAA 11999214 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 14 AATTAAAAATAAATATCCAACCGTT 38 ||| ||| ||||||||||||||||| Sbjct 10289233 AATAAAATATAAATATCCAACCGTT 10289209 Score = 37.4 bits (40), Expect = 5.4 Identities = 29/35 (83%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1462 TCCAGTCTATATCACCATTGGTGATGGAGGCAATA 1496 |||||||||||| | || ||||| ||| |||||| Sbjct 19469126 TCCAGTCTATATGAGCAATGGTGGGGGAAGCAATA 19469160 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 77 CAAACAATACAAAAACCAAA-GTTAAAGAAATAGAAT 112 |||||||||||||| ||||| ||||| |||| ||| Sbjct 25859516 CAAACAATACAAAACCCAAATATTAAAATAATACAAT 25859480 Score = 37.4 bits (40), Expect = 5.4 Identities = 38/49 (78%), Gaps = 3/49 (6%) Strand=Plus/Plus Query 115 AATACCTTTCCTTTTAAAATTCCCAAATAAAAACT---TGATTGAAACA 160 ||||||| || ||||||| ||||||||||||| | |||||| || Sbjct 26992882 AATACCTGAAGTTGTAAAATTACCAAATAAAAACTGCATAATTGAAGCA 26992930 >Query1 on lcl|Jm2D| Query1 on lcl|Jm2D Length=43614719 Score = 48.2 bits (52), Expect = 0.003 Identities = 46/59 (78%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 489 AGGTGCATATAACACAAGGAGATGTAGAAGGAAAGGCAGTGATAGTATCATGGGTGACA 547 |||||||||| || ||||| || || |||||||| || || | |||||||||||| Sbjct 39780600 AGGTGCATATTACCCAAGGCGACTATGATGGAAAGGCTGTAATCATCTCATGGGTGACA 39780542 Score = 42.8 bits (46), Expect = 0.13 Identities = 28/31 (90%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 690 AGTATGACACCAAGTACTATTATGTGTTAGG 720 |||||||||||||||||||||| |||||| Sbjct 39779832 AGTATGACACCAAGTACTATTACAAGTTAGG 39779802 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/38 (82%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 129 TAAAATTCCCAAATAAAAACTTGATTGAAACAGTGTTG 166 ||||||| |||| ||||||| || ||||||||||| Sbjct 8050887 TAAAATTTTGAAATGAAAACTTTTTTCAAACAGTGTTG 8050924 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Plus Query 534 TATC-ATGGGTGACACAAGAAGCAAAAGGATCTAACA 569 |||| || |||| || ||||||||||||||| |||| Sbjct 8856854 TATCTATAGGTGTCAAAAGAAGCAAAAGGATTGAACA 8856890 Score = 37.4 bits (40), Expect = 5.4 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Minus Query 280 AATaaaaaaaaaaTC-TCAGAATCCAA 305 |||||||||||||| ||||||||||| Sbjct 19028071 AATAAAAAAAAAATTGTCAGAATCCAA 19028045 Score = 37.4 bits (40), Expect = 5.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 504 AAGGAGATGTAGAAGGAAAGGCAGTGAT 531 ||||||| | ||||||||||||||||| Sbjct 19471513 AAGGAGAAGACGAAGGAAAGGCAGTGAT 19471486 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 240 TTTTTTCTCCCTTTGTTTAT 259 |||||||||||||||||||| Sbjct 34655605 TTTTTTCTCCCTTTGTTTAT 34655586 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 240 TTTTTTCTCCCTTTGTTTAT 259 |||||||||||||||||||| Sbjct 34698753 TTTTTTCTCCCTTTGTTTAT 34698734 Score = 37.4 bits (40), Expect = 5.4 Identities = 32/39 (82%), Gaps = 2/39 (5%) Strand=Plus/Minus Query 933 GGAGATGGGACAGTTGGGGAAGAT--TTGCTGAAAGAAG 969 ||||||| | | | |||||||| | ||||||||||||| Sbjct 35227833 GGAGATGAGTCTGCTGGGGAAGGTCTTTGCTGAAAGAAG 35227795 Score = 37.4 bits (40), Expect = 5.4 Identities = 47/65 (72%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1112 TGGTACTCGATAAAGAGAGGACCGGCTTACATAATCGTGCTAGCTTCATATTCAGCATAT 1171 |||||||| || | | | | | | ||| | |||||||||||| | |||||| ||| | Sbjct 39778401 TGGTACTCCATCAGGCGTGCATCTGCTCATATAATCGTGCTATCCAGCTATTCATCATTT 39778342 Query 1172 GGAAA 1176 || || Sbjct 39778341 GGTAA 39778337 >Query1 on lcl|Jm5D| Query1 on lcl|Jm5D Length=35798223 Score = 42.8 bits (46), Expect = 0.13 Identities = 138/208 (66%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 1187 CAGTACCAATGGCTCGAAGAGGAGTTCCCAAAGGTTAACAGAACGGAAACTCCGTGGTTG 1246 |||||| | ||||| || | || || | || ||| |||| | | |||| || ||| | Sbjct 1164304 CAGTACAAGTGGCTTGAGGCCGATTTGGCCAACGTTGACAGGAAGAAAACGCCATGGATC 1164245 Query 1247 ATTGTTCTGATGCATTCACCATGGTACAACAGCTATGATTAC-CATTACATGGAAGGTGA 1305 |||| || ||||| | || ||||| ||| ||| | | ||| | ||||| || Sbjct 1164244 TTTGTGCTCTTGCATGCCCCCTGGTATAACT-CTAATACAGCACATCAAGGTGAAGGAGA 1164186 Query 1306 AACAATGAGGGTAATGTATG--AGGCTTGGTTTGTCAAGTACAAAGTAGATGTAGTTTTT 1363 || ||||| || |||| || ||| | | | | | || || || || |||||| Sbjct 1164185 AAGCATGAGAA-AAGCTATGGAAGAGTTGCTGTATAAGGCACGG-GTCGACGTGGTTTTT 1164128 Query 1364 GCAGGTCATGTCCACGCCTACGAAAGAT 1391 ||||| ||||| || || || ||| ||| Sbjct 1164127 GCAGGCCATGTTCATGCATATGAACGAT 1164100 Score = 37.4 bits (40), Expect = 5.4 Identities = 40/53 (75%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1463 CCAGTCTATATCACCATTGGTGATGGAGGCAATATTGAGGGCTTGGCTACCAA 1515 ||||| ||||||||||||| ||||| || || | || ||| | || | ||| Sbjct 1192112 CCAGTGCATATCACCATTGGCGATGGTGGAAACAGAGAAGGCCTTGCCAGCAA 1192164 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 538 ATGGGTGACACAAGAAGCAAAAGGA 562 || ||||||||||||| |||||||| Sbjct 16959026 ATTGGTGACACAAGAAACAAAAGGA 16959002 >Query1 on lcl|Jm1D| Query1 on lcl|Jm1D Length=49856174 Score = 42.8 bits (46), Expect = 0.13 Identities = 25/26 (96%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 82 AATACAAAAACCAAAGTTAAAGAAAT 107 |||||||||||||||||||||| ||| Sbjct 1513775 AATACAAAAACCAAAGTTAAAGCAAT 1513750 Score = 39.2 bits (42), Expect = 1.6 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 1479 TTGGTGATGGAGGCAATATTGAGGGCTTGGCTACCA 1514 |||| |||| | |||||||| ||||||||||| || Sbjct 9486332 TTGGAGATGTAAGCAATATTAGGGGCTTGGCTAGCA 9486367 Score = 39.2 bits (42), Expect = 1.6 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 257 TATCGGAAAAAATCTCTCTTTCGAATaaaaaaaaaa 292 ||| ||||||||||| | |||| || ||||||| || Sbjct 47191503 TATTGGAAAAAATCTATATTTCAAAAAAAAAAATAA 47191538 Score = 39.2 bits (42), Expect = 1.6 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 566 AACAAAGTCATTTACTGGAAAGAGAATAGCA 596 ||||||||||| |||||||| |||| |||| Sbjct 49782342 AACAAAGTCATCAACTGGAAAAAGAAAAGCA 49782312 Score = 37.4 bits (40), Expect = 5.4 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1261 TTCACCATGGTACAACAG-CTATGATTACCAT 1291 |||| ||||||||||||| |||| || ||||| Sbjct 13425892 TTCAACATGGTACAACAGCCTATTATGACCAT 13425923 Score = 37.4 bits (40), Expect = 5.4 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 548 CAAGAAGCAAAAGGATCTAACAA 570 |||||||||||||||||||| || Sbjct 19090476 CAAGAAGCAAAAGGATCTAATAA 19090498 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 626 AATACTTACAAGTTCTACAATTATA 650 |||||||||| ||||||||||||| Sbjct 37553822 AATACTTACACATTCTACAATTATA 37553798 Score = 37.4 bits (40), Expect = 5.4 Identities = 34/42 (81%), Gaps = 1/42 (2%) Strand=Plus/Plus Query 584 AAAGA-GAATAGCACCAAAAAGCACAAAGCTCATGGCAAAAC 624 ||||| ||| | |||||||||||||||| || || | || || Sbjct 40877451 AAAGAAGAAAATCACCAAAAAGCACAAAACTAATAGAAATAC 40877492 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 689 GAGTATGACACCAAGTACTATTATG 713 |||||||| ||| |||||||||||| Sbjct 42176687 GAGTATGAGACCGAGTACTATTATG 42176711 >Query1 on lcl|Jm8D| Query1 on lcl|Jm8D Length=36225362 Score = 41.0 bits (44), Expect = 0.45 Identities = 37/45 (82%), Gaps = 4/45 (9%) Strand=Plus/Minus Query 1739 TGTATCTCTATGATTGAACA-ACCA---TCCAAATAAATGAATTG 1779 ||| | |||||||||||||| | || |||||||| |||||||| Sbjct 32228033 TGTCTGTCTATGATTGAACATATCAGTGTCCAAATAGATGAATTG 32227989 Score = 39.2 bits (42), Expect = 1.6 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 132 AATTCCCAAATAAAAACTTGATTGAAAC 159 || ||||||| ||||||||||||||||| Sbjct 14578430 AAATCCCAAA-AAAAACTTGATTGAAAC 14578456 Score = 39.2 bits (42), Expect = 1.6 Identities = 36/46 (78%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 78 AAACAATACAAAAACCAAAGTTAAAGAAATAGAATTTAATACCTTT 123 ||| | || |||||| ||| ||| |||||||||||||| |||| Sbjct 27631829 AAAGATTATAAAAACAAAACAAAAAAAAATAGAATTTAATTACTTT 27631784 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1692 ATTCTCCTTCTTGTAATTCT 1711 |||||||||||||||||||| Sbjct 20024779 ATTCTCCTTCTTGTAATTCT 20024760 >Query1 on lcl|Jm5S| Query1 on lcl|Jm5S Length=32113326 Score = 41.0 bits (44), Expect = 0.45 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 282 TaaaaaaaaaaTCTCAGAATCCAAAAA 308 |||| |||||||||| ||||||||||| Sbjct 28042406 TAAATAAAAAATCTCTGAATCCAAAAA 28042432 Score = 37.4 bits (40), Expect = 5.4 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1790 CTTGTGCCAAACAGAAAAAGTTAAAACAGA 1819 ||||| ||||||||||||||| |||||| Sbjct 2605581 CTTGTCACAAACAGAAAAAGTTCCAACAGA 2605552 Score = 37.4 bits (40), Expect = 5.4 Identities = 28/33 (85%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 126 TTTTAAAATTCCCAAATAAAAACTTGATTGAAA 158 |||| ||||||||||||||||| | ||| ||| Sbjct 4282948 TTTTTAAATTCCCAAATAAAAATTATATTAAAA 4282916 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 104 AAATAGAATTTAATACCTTTCCTTT 128 ||||||| |||||||||||| |||| Sbjct 13446112 AAATAGATTTTAATACCTTTACTTT 13446088 >Query1 on lcl|Jm7D| Query1 on lcl|Jm7D Length=26765518 Score = 39.2 bits (42), Expect = 1.6 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Minus Query 1798 AAACAGAAAAAGTTAAAACAGAGATCGA 1825 |||||||||||||||||| |||||| || Sbjct 14601968 AAACAGAAAAAGTTAAAA-AGAGATTGA 14601942 Score = 39.2 bits (42), Expect = 1.6 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Minus Query 1798 AAACAGAAAAAGTTAAAACAGAGATCGA 1825 |||||||||||||||||| |||||| || Sbjct 14602130 AAACAGAAAAAGTTAAAA-AGAGATTGA 14602104 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 88 AAAACCAAAGTTAAAGAAATAGAAT 112 ||||||||||| ||||||| ||||| Sbjct 6629136 AAAACCAAAGTAAAAGAAAGAGAAT 6629112 Score = 37.4 bits (40), Expect = 5.4 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 509 GATGTAGAAGGAAAGGCAGTGATAGTAT 536 |||| ||||| |||||||||||||| || Sbjct 6832408 GATGAAGAAGAAAAGGCAGTGATAGGAT 6832435 Score = 37.4 bits (40), Expect = 5.4 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1692 ATTCTCCTTCTTGTAATTCT 1711 |||||||||||||||||||| Sbjct 17474552 ATTCTCCTTCTTGTAATTCT 17474571 >Query1 on lcl|JmScfU0001| Query1 on lcl|JmScfU0001 Length=1155875 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 613 TCATGGCAAAACCAATACTTACAAG 637 ||| ||||||| ||||||||||||| Sbjct 413994 TCAAGGCAAAATCAATACTTACAAG 414018 >Query1 on lcl|Jm6S| Query1 on lcl|Jm6S Length=22373256 Score = 37.4 bits (40), Expect = 5.4 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 88 AAAACCAAAGTTAAAGAAATAGAAT 112 ||||||||||| ||||||| ||||| Sbjct 16806755 AAAACCAAAGTAAAAGAAAGAGAAT 16806779 >Query1 on lcl|Jm6D| Query1 on lcl|Jm6D Length=38364907 Score = 37.4 bits (40), Expect = 5.4 Identities = 31/37 (84%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 77 CAAACAATACAAAAACCAAA-GTTAAAGAAATAGAAT 112 |||||||||||||| ||||| ||||| |||| ||| Sbjct 16480511 CAAACAATACAAAACCCAAATATTAAAATAATACAAT 16480475 Score = 37.4 bits (40), Expect = 5.4 Identities = 35/45 (78%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 1466 GTCTATATCACCATTGGTGATGGAGGCAATATTGAGGGCTTGGCT 1510 ||| | || ||||||||||||||||| || | || || || ||| Sbjct 36510368 GTCCACATAACCATTGGTGATGGAGGAAACAGAGAAGGTTTAGCT 36510324 >Query1 on lcl|Jm1S| Query1 on lcl|Jm1S Length=30169828 Score = 37.4 bits (40), Expect = 5.4 Identities = 27/30 (90%), Gaps = 1/30 (3%) Strand=Plus/Minus Query 1798 AAACAGAAAAAGTTAAAACAGAGATCGAAC 1827 |||||||||||| ||||| |||||| |||| Sbjct 8351794 AAACAGAAAAAG-TAAAAAAGAGATTGAAC 8351766 Score = 37.4 bits (40), Expect = 5.4 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 12 ATAATTAAAAATAAATATCCAACCGTTCGTTA 43 ||||| ||||| ||||||||||| ||||||| Sbjct 18193417 ATAATGAAAAAACAATATCCAACC-TTCGTTA 18193387 Score = 37.4 bits (40), Expect = 5.4 Identities = 35/45 (78%), Gaps = 5/45 (11%) Strand=Plus/Minus Query 12 ATAATTAAAAATAAATATCCAACCGTTCGTT-----AACATATTC 51 |||||||||||| ||| || ||| |||||| ||||||||| Sbjct 29572801 ATAATTAAAAATCAATTTCAAACTTTTCGTTATCTCAACATATTC 29572757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 956538182148 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2