BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: JrSerr_genome.fa; Jm3101_genome.fa 227 sequences; 1,062,567,686 total letters Query= Length=1849 Score E Sequences producing significant alignments: (Bits) Value lcl|Jm2D 125 3e-26 lcl|Jr2D 123 1e-25 lcl|Jr2S 114 5e-23 lcl|Jm2S 105 3e-20 lcl|Jr6D 96.9 1e-17 lcl|Jm6D 96.9 1e-17 lcl|Jr3S 86.0 2e-14 lcl|Jm3S 86.0 2e-14 lcl|Jr6S 82.4 3e-13 lcl|Jm6S 82.4 3e-13 lcl|Jr1S 73.4 2e-10 lcl|Jr1D 69.8 2e-09 lcl|Jm1D 69.8 2e-09 lcl|Jm8D 68.0 6e-09 lcl|Jm4S 64.4 8e-08 lcl|Jm1S 64.4 8e-08 lcl|Jr8D 60.8 1e-06 lcl|Jm4D 60.8 1e-06 lcl|Jr4D 59.0 3e-06 lcl|Jr3D 51.8 5e-04 lcl|Jm3D 51.8 5e-04 lcl|Jm7D 48.2 0.006 lcl|Jr5S 44.6 0.074 lcl|Jr5D 44.6 0.074 lcl|Jm5D 44.6 0.074 lcl|Jr7D 42.8 0.26 lcl|Jr4S 42.8 0.26 lcl|Jm5S 42.8 0.26 lcl|Jr8S 41.0 0.90 lcl|Jr7S 41.0 0.90 lcl|Jm8S 41.0 0.90 lcl|Jm7S 41.0 0.90 >Query1 on lcl|Jm2D| Query1 on lcl|Jm2D Length=43614719 Score = 125 bits (138), Expect = 3e-26 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 1 ATGGAGGGTTATGACTTGAGTGTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTT 60 ||||||||| | ||| |||| ||||| || || |||||| ||||||||||| | ||| Sbjct 5660023 ATGGAGGGTACTTCTTTGGGTGTCAGAAAGGGTGCATGGACTGGAGAGGAAGATAACCTT 5659964 Query 61 CTGAGGCAGTGCATTGAGAATCAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCA 120 | ||||||||||||||||| || || ||||||||||||||||| |||||| || |||| Sbjct 5659963 TTAAGGCAGTGCATTGAGAAGCATGGAGAAGGAAAGTGGCACCAAGTTCCTCTCAGAGCA 5659904 Query 121 GGTA 124 |||| Sbjct 5659903 GGTA 5659900 Score = 111 bits (122), Expect = 6e-22 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| | ||||||||||||||| | |||||| | || || Sbjct 5659688 TGCAGGTTTAAATAGATGCCGGAAAGGTTGTAGACTAAGGTGGTTAAACTATCTAAAACC 5659629 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 || || |||| ||| || || |||| ||||||||| |||||||| ||| | || || || Sbjct 5659628 CAACATTAAGAGAGGGGATTTCGCAGTGGATGAAGTTGATCTAATGATTCGACTCCATAA 5659569 Query 460 GCTTCTAGGAAACAGG 475 ||| |||| |||||| Sbjct 5659568 GCTCTTAGGTAACAGG 5659553 Score = 104 bits (114), Expect = 9e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || || | || |||||||||| ||||||| |||||||| | || || Sbjct 5651339 TGCAGGCTTAAATAGATGTCGAAAAAGCTGTAGACAAAGGTGGTTGAACTATCTAAAACC 5651280 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCT 441 ||||||||||| |||||| || | |||||||||||| ||||| Sbjct 5651279 AAATATCAAGAGAGGAGACTTCGAAGAGGATGAAGTTGATCT 5651238 Score = 96.9 bits (106), Expect = 1e-17 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 22 GTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATTGAGAAT 81 ||| ||||||| || |||||| || ||||||| | ||||||| | ||||||||||| Sbjct 5651568 GTGCGAAAAGGGGCATGGACTGCAGGGGAAGATAAGCTTCTGAAAGATTGCATTGAGAAG 5651509 Query 82 CAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTA 124 | || ||||||||||||||||| |||||| || |||||||| Sbjct 5651508 GATGGAGAAGGAAAGTGGCACCAAGTTCCTCTCAGAGCAGGTA 5651466 Score = 73.4 bits (80), Expect = 2e-10 Identities = 107/150 (71%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 ||| ||| ||| || || | ||||| ||||||||||||||| | ||||| | | || Sbjct 40026680 ATGTAGGTTTGCTTAGATGTGGCAAGAGTTGTAGACTAAGGTGGATAAACTACCTCAGGC 40026621 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || | |||| |||| | || | || || |||| || || || || | ||||||| Sbjct 40026620 CTGATCTTAAGAGAGGAAACTTCACTGAAGAAGAAGATGAACTCATCATCAACCTTCACA 40026561 Query 459 AGCTTCTAGGAAACAGGTAC-CAATAAATA 487 | | || ||||||| |||| | ||||||| Sbjct 40026560 ACTTACTTGGAAACAAGTACGCCATAAATA 40026531 Score = 68.0 bits (74), Expect = 6e-09 Identities = 97/137 (71%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| || || |||||||||| || || | ||| |||| ||| | | || Sbjct 33431628 TGCAGGTTTGAAAAGATGTGGGAAGAGCTGCAGGCTCCGCTGGTTGAATTATCTTAGACC 33431687 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | || | || ||| | | || ||||||| ||| || || || ||||||||||| Sbjct 33431688 TGACATTAGGAGAGGTAACATATCACCAGATGAAGAAGAACTCATCATCAGGCTTCACAA 33431747 Query 460 GCTTCTAGGAAACAGGT 476 ||| | || ||||||| Sbjct 33431748 GCTCTTGGGGAACAGGT 33431764 Score = 60.8 bits (66), Expect = 1e-06 Identities = 56/71 (79%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || || ||||| |||||||| | || ||||| || || || ||||| ||||||| ||| Sbjct 5657720 TGCAGATGGTCGCTGATTGCTGGTAGGCTTCCGGGAAGAACACCGAATGATGTGAAGAAT 5657661 Query 1477 TACTGGAACAC 1487 |||||||| || Sbjct 5657660 TACTGGAATAC 5657650 Score = 57.2 bits (62), Expect = 1e-05 Identities = 55/71 (77%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| |||||||| | | |||||||| || |||||||||||||| ||| | | ||| Sbjct 6982407 TGCAGGTCTGAACAGGAGTGGCAAGAGCTGCAGGCTAAGGTGGGTGAATTATCTCAGGCC 6982348 Query 400 AAATATCAAGA 410 | |||||| Sbjct 6982347 TGGTCTCAAGA 6982337 Score = 55.4 bits (60), Expect = 4e-05 Identities = 47/58 (81%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||| ||||| ||| | | |||||||| || |||||||||||||| ||| | ||||| Sbjct 6978228 CAGGTTTGAATAGGAGTGGCAAGAGCTGCAGGCTAAGGTGGGTGAATTATCTCAAGCC 6978171 Score = 53.6 bits (58), Expect = 1e-04 Identities = 56/74 (76%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 22 GTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATTGAGAAT 81 ||| ||||||| || |||||| || ||||||| | ||| ||| | ||||||||||| Sbjct 5651778 GTGCGAAAAGGGGCATGGACTGCAGGGGAAGATAAGCTTATGAAAGATTGCATTGAGAAG 5651719 Query 82 CAAGGTGAAGGAAA 95 | | |||||||| Sbjct 5651718 GATTGAGAAGGAAA 5651705 Score = 51.8 bits (56), Expect = 5e-04 Identities = 93/136 (68%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| |||| ||| | | ||||| || || ||||| ||| |||||| ||| || | Sbjct 39402730 CAGGTTTGATGAGGGGAGGAAAGAGTTGCAGGCTAAGATGGAAGAACTACCTGAGACCTA 39402789 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGC 461 | || || || ||| | | | || |||| ||| || || || | | || |||| Sbjct 39402790 ACATTAAACGTGGTGAGATGTCCAAAGAGGAAGAAGACCTTATCGTTCGAATGCATAAGC 39402849 Query 462 TTCTAGGAAACAGGTA 477 ||||||| |||||||| Sbjct 39402850 TTCTAGGCAACAGGTA 39402865 Score = 48.2 bits (52), Expect = 0.006 Identities = 52/69 (75%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| |||||||| | || ||||| ||| | || | ||| | | ||||| ||| Sbjct 33489829 AGATGGTCTCTGATTGCTGGGAGGCTTCCGGGCCGAACAGACAATGAAATAAAAAACTAC 33489888 Query 1480 TGGAACACC 1488 ||||||||| Sbjct 33489889 TGGAACACC 33489897 Score = 46.4 bits (50), Expect = 0.021 Identities = 69/97 (71%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 1391 TGTATTAACTTTCTCATGCTATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAG 1450 ||||||||| | |||| | | ||| || ||||| |||||||| ||||| | || | Sbjct 1598134 TGTATTAACGAT-TCATAGAAATTGTTGCAGATGGTCTTTGATTGCGGGAAGATTACCGG 1598076 Query 1451 GCAGGACTGCGAATAATGTGAAAAATTACTGGAACAC 1487 | || |||| || | | || || ||||||||||| Sbjct 1598075 GAAGAACTGACAACGAGATCAAGAACTACTGGAACAC 1598039 Score = 46.4 bits (50), Expect = 0.021 Identities = 56/75 (75%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 1409 CTATGTATTGAAGGTGGTCATTG-ATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAAT 1467 || ||| || || ||||||||| |||||| | ||||||||||| || || || || | Sbjct 5632133 CTTTGTTGTGCAGATGGTCATTGCATTGCTGGCAGACTTCCAGGAAGAACAGCCAACGGT 5632074 Query 1468 GTGAAAAATTACTGG 1482 || || || || ||| Sbjct 5632073 GTAAAGAACTATTGG 5632059 Score = 44.6 bits (48), Expect = 0.074 Identities = 70/98 (71%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 1392 GTATTAACTTTCTCATGCTATGTAT-TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAG 1450 ||| | || || ||||| || || | || ||||||||| |||| || | ||| | || | Sbjct 33305456 GTAATCACATTGTCATG-TACGTGTGTGCAGGTGGTCACTGATCGCAGGCAGATTACCGG 33305514 Query 1451 GCAGGACTGCGAATAATGTGAAAAATTACTGGAACACC 1488 | | || | ||| | | || ||||||||||||||| Sbjct 33305515 GACGAACAGACAATGAAATTAAGAATTACTGGAACACC 33305552 Score = 44.6 bits (48), Expect = 0.074 Identities = 32/37 (86%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 1327 ATAATATATTATCGCTTATTTTCAtaaaataaaataa 1363 |||||||||||| | |||| ||||||||||||||| Sbjct 34012906 ATAATATATTATAATTAATTTACATAAAATAAAATAA 34012942 Score = 42.8 bits (46), Expect = 0.26 Identities = 52/71 (73%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||||||||| || | ||| | || || | |||| ||| | | || ||| Sbjct 33332596 TGCAGGTGGTCATTGATCGCCGGGAGAATACCTGGGCGAACTGACAATGAAATAAAGAAT 33332655 Query 1477 TACTGGAACAC 1487 || |||||||| Sbjct 33332656 TATTGGAACAC 33332666 Score = 41.0 bits (44), Expect = 0.90 Identities = 53/73 (73%), Gaps = 9/73 (12%) Strand=Plus/Minus Query 1034 TAATAATTTTCAAAAATTCTTTAGGAGTTTGCTGTGAtttttttt---ctatttaaaatt 1090 ||||| |||| ||||||||||| |||||| ||| ||||| ||||| ||||| Sbjct 3195408 TAATATTTTTTAAAAATTCTTTCTGAGTTT------ATTCTTTTTAAATTATTTCAAATT 3195355 Query 1091 tttatttcttttt 1103 || ||||| || Sbjct 3195354 TTCTATTCTTATT 3195342 Score = 41.0 bits (44), Expect = 0.90 Identities = 43/54 (80%), Gaps = 6/54 (11%) Strand=Plus/Minus Query 1328 TAATATATTATCGCTTATTTTCAtaaaataaaataa---aaattaaaaaaaaaa 1378 ||||||||||| |||| || ||||| || |||| ||||||||||||||| Sbjct 9506832 TAATATATTATA--TTATATT-ATAAATTAGTATAATGAAAATTAAAAAAAAAA 9506782 Score = 39.2 bits (42), Expect = 3.1 Identities = 54/74 (73%), Gaps = 4/74 (5%) Strand=Plus/Minus Query 22 GTGAGAAAAGGAGCTTGGACTAGAGAGGAAG--ATGATCTTCTGAGGCAGTGCATTGAGA 79 ||||||||||| | ||||| | || |||| |||| |||||| | | |||| | Sbjct 3280749 GTGAGAAAAGGGCCATGGACCATGGAAGAAGACATGA--TTCTGATCAATTATATTGCAA 3280692 Query 80 ATCAAGGTGAAGGA 93 |||| ||||||||| Sbjct 3280691 ATCACGGTGAAGGA 3280678 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 28 AAAGGAGCTTGGACTAGAGAGGAAGATGA 56 |||||||| ||||| | |||||||||||| Sbjct 40026894 AAAGGAGCATGGACCAAAGAGGAAGATGA 40026866 >Query1 on lcl|Jr2D| Query1 on lcl|Jr2D Length=43955564 Score = 123 bits (136), Expect = 1e-25 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || || | || |||||||||| ||||||| |||||||| | || || Sbjct 5630302 TGCAGGCTTAAATAGATGTCGAAAAAGCTGTAGACAAAGGTGGTTGAACTATCTAAAACC 5630243 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 ||||||||||| |||||| || | |||||||||||| |||||||| || || || || | Sbjct 5630242 AAATATCAAGAGAGGAGACTTCGAAGAGGATGAAGTTGATCTAATGATCAGACTCCATAC 5630183 Query 460 GCTTCTAGGAAACAGGTA 477 ||| | || |||||||| Sbjct 5630182 GCTCTTGGGTAACAGGTA 5630165 Score = 116 bits (128), Expect = 1e-23 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 16 TTGAGTGTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATT 75 ||| |||| ||||| || || |||||| ||||||||||| ||| | |||||||||||| Sbjct 5638213 TTGGGTGTCAGAAAGGGTGCATGGACTGGAGAGGAAGATATCCTTTTAAGGCAGTGCATT 5638154 Query 76 GAGAATCAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTA 124 ||||| || || ||||||||||||||||| |||||| || |||||||| Sbjct 5638153 GAGAAGCATGGAGAAGGAAAGTGGCACCAAGTTCCTCTCAGAGCAGGTA 5638105 Score = 111 bits (122), Expect = 6e-22 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| || ||||||||||||||| | |||||| | || || Sbjct 5637933 TGCAGGTTTAAATAGATGCCGGAAAAGTTGTAGACTAAGGTGGTTAAACTATCTTAAACC 5637874 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 || || |||| ||| || || |||| |||||||| |||||||| ||| | || || || Sbjct 5637873 CAACATTAAGAGAGGGGATTTCGCAGTAGATGAAGTTGATCTAATGATTCGACTCCATAA 5637814 Query 460 GCTTCTAGGAAACAGG 475 ||| |||| |||||| Sbjct 5637813 GCTCTTAGGTAACAGG 5637798 Score = 98.7 bits (108), Expect = 4e-18 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 22 GTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATTGAGAAT 81 ||| ||||||| || |||||| || ||||||| | ||||||| | ||||||||||| Sbjct 5630535 GTGCGAAAAGGGGCATGGACTGCAGGGGAAGATAAGCTTCTGAAAGATTGCATTGAGAAG 5630476 Query 82 CAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTAT 125 | || ||||||||||||||||| |||||| || ||||||||| Sbjct 5630475 GATGGAGAAGGAAAGTGGCACCAAGTTCCTCTCAGAGCAGGTAT 5630432 Score = 73.4 bits (80), Expect = 2e-10 Identities = 107/150 (71%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 ||| ||| ||| || || | ||||| ||||||||||||||| | ||||| | | || Sbjct 40543713 ATGTAGGTTTGCTTAGATGTGGCAAGAGTTGTAGACTAAGGTGGATAAACTACCTCAGGC 40543654 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || | |||| |||| | || | || || |||| || || || || | ||||||| Sbjct 40543653 CTGATCTTAAGAGAGGAAACTTCACTGAAGAAGAAGATGAACTCATCATCAACCTTCACA 40543594 Query 459 AGCTTCTAGGAAACAGGTAC-CAATAAATA 487 | | || ||||||| |||| | ||||||| Sbjct 40543593 ACTTACTTGGAAACAAGTACGCCATAAATA 40543564 Score = 71.6 bits (78), Expect = 5e-10 Identities = 98/137 (72%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| || || |||||||||| || || | ||| |||| ||| | | || Sbjct 34090493 TGCAGGTTTGAAAAGATGTGGGAAGAGCTGCAGGCTCCGCTGGTTGAATTATCTTAGACC 34090434 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | || |||| ||| | | || ||||||| ||| || || || ||||||||||| Sbjct 34090433 TGACATTAAGAGAGGTAACATATCACCAGATGAAGAAGAACTCATCATCAGGCTTCACAA 34090374 Query 460 GCTTCTAGGAAACAGGT 476 ||| | || ||||||| Sbjct 34090373 GCTCTTGGGGAACAGGT 34090357 Score = 66.2 bits (72), Expect = 2e-08 Identities = 57/71 (80%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| |||||||| | || ||||| || || || ||||| ||||||| ||| Sbjct 5635878 TGCAGGTGGTCGCTGATTGCTGGTAGGCTTCCGGGAAGAACACCGAATGATGTGAAGAAT 5635819 Query 1477 TACTGGAACAC 1487 |||||||| || Sbjct 5635818 TACTGGAATAC 5635808 Score = 57.2 bits (62), Expect = 1e-05 Identities = 55/71 (77%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| |||||||| | | |||||||| || |||||||||||||| ||| | | ||| Sbjct 6944708 TGCAGGTCTGAACAGGAGTGGCAAGAGCTGCAGGCTAAGGTGGGTGAATTATCTCAGGCC 6944649 Query 400 AAATATCAAGA 410 | |||||| Sbjct 6944648 TGGTCTCAAGA 6944638 Score = 53.6 bits (58), Expect = 1e-04 Identities = 56/74 (76%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 1409 CTATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATG 1468 || ||| || || ||||||||||||||| | ||||||||||| || || || || || Sbjct 5623404 CTTTGTTGTGCAGATGGTCATTGATTGCTGGCAGACTTCCAGGAAGAACAGCCAACGGTG 5623345 Query 1469 TGAAAAATTACTGG 1482 | || || || ||| Sbjct 5623344 TAAAGAACTATTGG 5623331 Score = 51.8 bits (56), Expect = 5e-04 Identities = 46/58 (79%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||| ||||| ||| | |||||||| || |||||||||||||| ||| | ||||| Sbjct 6936492 CAGGTTTGAATAGGAATGGCAAGAGCTGCAGGCTAAGGTGGGTGAATTATCTCAAGCC 6936435 Score = 50.0 bits (54), Expect = 0.002 Identities = 54/70 (77%), Gaps = 5/70 (7%) Strand=Plus/Plus Query 1312 TTTATTTGTTCATCA-ATAATATATTATCGCTTATTTTCAtaaaataaa----ataaaaa 1366 ||| |||| ||| | |||||||||||| |||||| ||||||| ||| ||||||| Sbjct 34872004 TTTTTTTGGACATTATATAATATATTATAATTTATTTACATAAAAAAAAGAATATAAAAA 34872063 Query 1367 ttaaaaaaaa 1376 ||| ||||| Sbjct 34872064 ATAATAAAAA 34872073 Score = 48.2 bits (52), Expect = 0.006 Identities = 46/58 (79%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1326 AATAATATATTATCGCTTATTTTCAtaaaataaaa-taaaaattaaaaaaaaaaCTAG 1382 ||||||||||| | || |||| |||||||||| ||||| ||||||||||||| Sbjct 35338878 AATAATATATTCTAATTTCTTTTTTTAAAATAAAACAAAAAAAGGAAAAAAAAACTAG 35338935 Score = 48.2 bits (52), Expect = 0.006 Identities = 80/116 (69%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 362 AAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGTTT 421 ||||| || || ||||| ||| |||||| ||| || || || || || ||| | Sbjct 39916287 AAGAGTTGCAGGCTAAGATGGAAGAACTACCTGAGACCTAACATTAAACGTGGTGAGATG 39916346 Query 422 GCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAGGTA 477 | | || |||| ||| || || || | | || ||||||||||| |||||||| Sbjct 39916347 TCCAAAGAGGAAGAAGACCTTATCGTTCGAATGCATAAGCTTCTAGGCAACAGGTA 39916402 Score = 46.4 bits (50), Expect = 0.021 Identities = 69/97 (71%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 1391 TGTATTAACTTTCTCATGCTATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAG 1450 ||||||||| | |||| | | ||| || ||||| |||||||| ||||| | || | Sbjct 1557430 TGTATTAACGAT-TCATAGAAATTGTTGCAGATGGTCTTTGATTGCGGGAAGATTACCGG 1557372 Query 1451 GCAGGACTGCGAATAATGTGAAAAATTACTGGAACAC 1487 | || |||| || | | || || ||||||||||| Sbjct 1557371 GAAGAACTGACAACGAGATCAAGAACTACTGGAACAC 1557335 Score = 44.6 bits (48), Expect = 0.074 Identities = 51/69 (74%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| | |||||| | || ||||| ||| | || | ||| | | ||||| ||| Sbjct 33741148 AGATGGTCTCTAATTGCTGGGAGGCTTCCGGGCCGAACAGACAATGAAATAAAAAACTAC 33741207 Query 1480 TGGAACACC 1488 ||||||||| Sbjct 33741208 TGGAACACC 33741216 Score = 44.6 bits (48), Expect = 0.074 Identities = 51/69 (74%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| | |||||| | || ||||| ||| | || | ||| | | ||||| ||| Sbjct 33798224 AGATGGTCTCTAATTGCTGGGAGGCTTCCGGGCCGAACAGACAATGAAATAAAAAACTAC 33798283 Query 1480 TGGAACACC 1488 ||||||||| Sbjct 33798284 TGGAACACC 33798292 Score = 44.6 bits (48), Expect = 0.074 Identities = 51/69 (74%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| | |||||| | || ||||| ||| | || | ||| | | ||||| ||| Sbjct 33881635 AGATGGTCTCTAATTGCTGGGAGGCTTCCGGGCCGAACAGACAATGAAATAAAAAACTAC 33881694 Query 1480 TGGAACACC 1488 ||||||||| Sbjct 33881695 TGGAACACC 33881703 Score = 44.6 bits (48), Expect = 0.074 Identities = 51/69 (74%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| | |||||| | || ||||| ||| | || | ||| | | ||||| ||| Sbjct 34019546 AGATGGTCTCTAATTGCTGGGAGGCTTCCGGGCCGAACAGACAATGAAATAAAAAACTAC 34019487 Query 1480 TGGAACACC 1488 ||||||||| Sbjct 34019486 TGGAACACC 34019478 Score = 42.8 bits (46), Expect = 0.26 Identities = 56/78 (72%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 343 AGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAA 402 |||| || | || || |||||||||||||| | || ||| || ||| | | || | Sbjct 1968220 AGGGCTGCAGAGATGTGGGAAGAGCTGTAGATTGAGATGGACCAATTATCTTAGACCTGA 1968161 Query 403 TATCAAGAAAGGAGAGTT 420 ||| |||| |||| |||| Sbjct 1968160 TATTAAGAGAGGAAAGTT 1968143 Score = 42.8 bits (46), Expect = 0.26 Identities = 50/68 (74%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 |||||||||||||| || | ||| | || || | |||| ||| | | || ||||| Sbjct 34193907 AGGTGGTCATTGATCGCCGGGAGAATACCTGGGCGAACTGACAATGAAATAAAGAATTAT 34193848 Query 1480 TGGAACAC 1487 |||||||| Sbjct 34193847 TGGAACAC 34193840 Score = 42.8 bits (46), Expect = 0.26 Identities = 66/92 (72%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 1398 ACTTTCTCATGCTATGTAT-TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGA 1456 || || ||||| || || | || ||||||||| |||| || | ||| | || || | | Sbjct 34207155 ACATTGTCATG-TACGTGTGTGCAGGTGGTCACTGATCGCAGGCAGATTACCTGGACGAA 34207097 Query 1457 CTGCGAATAATGTGAAAAATTACTGGAACACC 1488 | | ||| | | || ||||||||||||||| Sbjct 34207096 CAGACAATGAAATTAAGAATTACTGGAACACC 34207065 Score = 41.0 bits (44), Expect = 0.90 Identities = 31/37 (84%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 544 ACCCTAACCCCTaaaaacaaaacaaaaataaaaaaTA 580 ||||||||||| | | |||||||| || |||||||| Sbjct 21098949 ACCCTAACCCCAACTATCAAAACAATAAGAAAAAATA 21098985 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 1330 ATATATTATCGCTTATTTTCAtaaaata 1357 ||||||||| |||||||||||||| ||| Sbjct 39574410 ATATATTAT-GCTTATTTTCATAACATA 39574436 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 28 AAAGGAGCTTGGACTAGAGAGGAAGATGA 56 |||||||| ||||| | |||||||||||| Sbjct 40543918 AAAGGAGCATGGACCAAAGAGGAAGATGA 40543890 >Query1 on lcl|Jr2S| Query1 on lcl|Jr2S Length=37319718 Score = 114 bits (126), Expect = 5e-23 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3731809 TGCAGGTTTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3731750 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 |||||||||| ||| | ||| || |||||||| |||||||| || || || || || Sbjct 3731749 CAATATCAAGAGAGGGAACTTTTCAACAGATGAAGTGGATCTAATGATCAGACTCCATAA 3731690 Query 460 GCTTCTAGGAAACAGGTA 477 |||| ||||||||||||| Sbjct 3731689 GCTTTTAGGAAACAGGTA 3731672 Score = 105 bits (116), Expect = 3e-20 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3756942 TGCAGGATTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3756883 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 |||||||||| ||| | || || |||||||| |||||||| || || || || || Sbjct 3756882 CAATATCAAGAGAGGGAACTTCTCAACAGATGAAGTGGATCTAATGATCAGACTCCATAA 3756823 Query 460 GCTTCTAGGAAACAGGTA 477 ||| ||||||||||||| Sbjct 3756822 GCTCTTAGGAAACAGGTA 3756805 Score = 105 bits (116), Expect = 3e-20 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3773415 TGCAGGATTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3773356 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 |||||||||||||| | || || || ||||| |||||||| || || || || || Sbjct 3773355 CAATATCAAGAAAGGGAACTTCTCAACAGACGAAGTGGATCTAATGATCAGACTCCATAA 3773296 Query 460 GCTTCTAGGAAACAGGTA 477 ||| ||||||||||||| Sbjct 3773295 GCTCTTAGGAAACAGGTA 3773278 Score = 96.9 bits (106), Expect = 1e-17 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 20 GTGTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATTGAGA 79 || |||||||||| || |||||| ||| |||||| | ||||||||||||||||| Sbjct 3732747 GTTTGAGAAAAGGCGCATGGACTGCAGAAGAAGATATCCGTCTGAGGCAGTGCATTGGCG 3732688 Query 80 ATCAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTAT 125 | || || |||||||| |||||||| |||||| ||| | ||||||| Sbjct 3732687 AGCATGGAGAAGGAAACTGGCACCAAGTTCCTCACATAACAGGTAT 3732642 Score = 86.0 bits (94), Expect = 2e-14 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| |||| || || | |||||||| || || ||||| |||| || ||| ||| Sbjct 24595916 CAGGTCTGAAGAGATGTGGCAAGAGCTGCAGGCTTCGGTGGTTGAATTACCTGAGACCAG 24595857 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGC 461 | || |||| ||| | | || |||| |||| ||| || || |||||||||||||||| Sbjct 24595856 ACATTAAGAGAGGTAACATATCACAGGACGAAGAAGAACTCATCATTAGGCTTCACAAGC 24595797 Query 462 TTCTAGGAAACAGGT 476 || |||| ||||||| Sbjct 24595796 TTTTAGGGAACAGGT 24595782 Score = 77.0 bits (84), Expect = 1e-11 Identities = 99/137 (72%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| |||| || || | |||||||| || || | ||| |||| || ||| || Sbjct 24623414 TGCAGGTTTGAGAAGATGTGGTAAGAGCTGCAGGCTTCGCTGGTTGAATTACCTGAGACC 24623355 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | ||||||| ||| | | || ||||||| ||| || || |||||||||||||| Sbjct 24623354 AGACATCAAGAGAGGTAACATATCACCAGATGAAGAAGAACTCATCATTAGGCTTCACAA 24623295 Query 460 GCTTCTAGGAAACAGGT 476 ||| | || ||||||| Sbjct 24623294 GCTCTTGGGGAACAGGT 24623278 Score = 44.6 bits (48), Expect = 0.074 Identities = 53/72 (74%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| || ||||| |||||||| ||| | | || || || |||| ||| | | || || Sbjct 1009592 TTGCAGATGGTCTTTGATTGCGGGAAAATTACCGGGAAGAACTGACAATGAGATCAAGAA 1009533 Query 1476 TTACTGGAACAC 1487 ||||||||||| Sbjct 1009532 CTACTGGAACAC 1009521 Score = 42.8 bits (46), Expect = 0.26 Identities = 56/78 (72%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTG 1470 |||| ||| |||||||| ||||| | || || || || || | ||| |||| Sbjct 1688102 ATGTGTTGCAGGTGGTCTCATATTGCAAAACAGCTACCTGGAAGAACAGATAATGATGTC 1688161 Query 1471 AAAAATTACTGGAACACC 1488 ||||| |||||||||||| Sbjct 1688162 AAAAACTACTGGAACACC 1688179 Score = 41.0 bits (44), Expect = 0.90 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Minus Query 1330 ATATATTATCGCTTATTTTCAtaaaataa 1358 ||||||||| |||||||||||||| |||| Sbjct 10938954 ATATATTAT-GCTTATTTTCATAACATAA 10938927 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 28 AAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCT 62 |||||||| ||||| | |||||||||||| || || Sbjct 34406750 AAAGGAGCATGGACCAAAGAGGAAGATGAACTCCT 34406716 Score = 39.2 bits (42), Expect = 3.1 Identities = 45/61 (74%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||| | ||| | |||| ||| |||||||||||| | || || || | ||| Sbjct 6144033 TGCAGGCTTGCAGAGGAAAGGAAAGACCTGCAGACTAAGGTGGATTAATTACTTAAGGCC 6144092 Query 400 A 400 | Sbjct 6144093 A 6144093 Score = 39.2 bits (42), Expect = 3.1 Identities = 33/40 (83%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 1351 taaaataaaataaaaattaaaaaaaaaaCTAGCATACAAA 1390 || ||||||||||| | || ||| ||| ||||||||||| Sbjct 28899434 TATAATAAAATAAATA--AACAAACAAAGTAGCATACAAA 28899471 >Query1 on lcl|Jm2S| Query1 on lcl|Jm2S Length=34707362 Score = 105 bits (116), Expect = 3e-20 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3711509 TGCAGGTTTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3711450 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 |||||||||| ||| | || || |||||||| |||||||| || || || || || Sbjct 3711449 CAATATCAAGAGAGGGAACTTCTCAACTGATGAAGTGGATCTAATGATCAGACTCCATAA 3711390 Query 460 GCTTCTAGGAAACAGGTA 477 ||| ||||||||||||| Sbjct 3711389 GCTCTTAGGAAACAGGTA 3711372 Score = 100 bits (110), Expect = 1e-18 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3624197 TGCAGGTTTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3624138 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 |||||||||| ||| | || || |||||| | |||||||| || || || || || Sbjct 3624137 CAATATCAAGAGAGGGAACTTCTCAACAGATGAACTGGATCTAATGATCAGACTCCATAA 3624078 Query 460 GCTTCTAGGAAACAGGTA 477 ||| ||||||||||||| Sbjct 3624077 GCTCTTAGGAAACAGGTA 3624060 Score = 95.1 bits (104), Expect = 5e-17 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 16 TTGAGTGTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTGCATT 75 ||| || |||||||||| || |||||| ||| |||||| | |||||||||||||||| Sbjct 3624456 TTGGGTTTGAGAAAAGGCGCATGGACTGCAGAAGAAGATATCCGTCTGAGGCAGTGCATT 3624397 Query 76 GAGAATCAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTAT 125 | | || || ||||||| |||||||| |||||| || ||||||||| Sbjct 3624396 GGCGAGCATGGACAAGGAAACTGGCACCAAGTTCCTCTCAGAGCAGGTAT 3624347 Score = 93.3 bits (102), Expect = 2e-16 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 12 TGACTTGAGTGTGAGAAAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCTGAGGCAGTG 71 ||| ||| || |||||||||| || |||||| || |||||| | |||||||||||| Sbjct 3682453 TGATTTGGGTTTGAGAAAAGGCGCATGGACTGCGGAAGAAGATATCCGTCTGAGGCAGTG 3682394 Query 72 CATTGAGAATCAAGGTGAAGGAAAGTGGCACCAGGTTCCTTACAAAGCAGGTAT 125 ||||| | || || ||||||| |||||||| |||||| || ||||||||| Sbjct 3682393 CATTGGCGAGCATGGACAAGGAAACTGGCACCAAGTTCCTCTCAGAGCAGGTAT 3682340 Score = 87.8 bits (96), Expect = 7e-15 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| || || || ||| |||| |||||||||| |||||| |||||||| | || Sbjct 3682192 TGCAGGTTTAAATAGATGCCGGAAAAGCTGTAGACAGAGGTGGTTGAACTATCTACGACC 3682133 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | ||||||| ||| | || || |||||||| |||| ||| || || || || || Sbjct 3682132 CAGTATCAAGTGAGGGAACTTCTCAACTGATGAAGTGGATCAAATGATCAGACTCCATAA 3682073 Query 460 GCTTCTAGGAAACAGG 475 ||| ||||||||||| Sbjct 3682072 GCTCTTAGGAAACAGG 3682057 Score = 86.0 bits (94), Expect = 2e-14 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| |||| || || |||||||||| || || ||||| |||| || ||| ||| Sbjct 23657702 CAGGTCTGAAGAGATGTGGGAAGAGCTGCAGGCTTCGGTGGTTGAATTACCTGAGACCAG 23657643 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGC 461 | || |||| ||| | | || ||||||||| ||| || || || ||||||||||| | Sbjct 23657642 ACATTAAGAGAGGTAACATATCACAGGATGAAGAAGAACTCATCATCAGGCTTCACAAAC 23657583 Query 462 TTCTAGGAAACAGGT 476 || |||| ||||||| Sbjct 23657582 TTTTAGGGAACAGGT 23657568 Score = 62.6 bits (68), Expect = 3e-07 Identities = 96/137 (70%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| |||| || || | |||||||| || || | ||| |||| || ||| || Sbjct 23680536 TGCAGGATTGAGAAGATGTGGTAAGAGCTGCAGGCTTCGCTGGTTGAATTACCTGAGACC 23680477 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | ||||| | ||| | | || ||||||| || || || |||||||||||||| Sbjct 23680476 AGACATCAAAAGAGGTAACATCTCACCAGATGAAGATGAACTCATCATTAGGCTTCACAA 23680417 Query 460 GCTTCTAGGAAACAGGT 476 || | || ||||||| Sbjct 23680416 ACTCTTGGGGAACAGGT 23680400 Score = 48.2 bits (52), Expect = 0.006 Identities = 50/66 (76%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 335 ATGGATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTG 394 ||| ||||||| ||| | ||| | |||||||| |||||||||||| | || || || Sbjct 6075230 ATGCATGCAGGCTTGCAGAGGAATGGAAAGAGCTGCAGACTAAGGTGGATTAATTACTTA 6075289 Query 395 AAGCCA 400 | |||| Sbjct 6075290 AGGCCA 6075295 Score = 42.8 bits (46), Expect = 0.26 Identities = 56/78 (72%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTG 1470 |||| ||| |||||||| ||||| | || || || || || | ||| |||| Sbjct 1653630 ATGTGTTGCAGGTGGTCTCATATTGCAAAACAGCTACCTGGAAGAACAGATAATGATGTC 1653689 Query 1471 AAAAATTACTGGAACACC 1488 ||||| |||||||||||| Sbjct 1653690 AAAAACTACTGGAACACC 1653707 Score = 41.0 bits (44), Expect = 0.90 Identities = 52/72 (72%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| || ||||| |||||||| | ||| | || || || |||| || | | || || Sbjct 987446 TTGCAGATGGTCTTTGATTGCGGGGAGATTACCGGGAAGAACTGACAACGAGATCAAGAA 987387 Query 1476 TTACTGGAACAC 1487 ||||||||||| Sbjct 987386 CTACTGGAACAC 987375 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 28 AAAGGAGCTTGGACTAGAGAGGAAGATGATCTTCT 62 |||||||| ||||| | |||||||||||| || || Sbjct 31896189 AAAGGAGCATGGACCAAAGAGGAAGATGAACTCCT 31896155 Score = 39.2 bits (42), Expect = 3.1 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 543 AACCCTAACCCCTaaaaacaaaacaaaaataaaaaa 578 ||||||||||| | ||| |||| ||||| |||||| Sbjct 619993 AACCCTAACCCATTTAAAAAAAAAAAAAAAAAAAAA 620028 Score = 39.2 bits (42), Expect = 3.1 Identities = 32/39 (82%), Gaps = 0/39 (0%) Strand=Plus/Minus Query 906 AAAGAGGGAAAGATGTTTGGTAGCGTTGGGTTCGGGCTT 944 || ||| || ||||||| ||||||||||||| || ||| Sbjct 16387998 AAGGAGAGATGGATGTTTAGTAGCGTTGGGTTGGGTCTT 16387960 >Query1 on lcl|Jr6D| Query1 on lcl|Jr6D Length=37991167 Score = 96.9 bits (106), Expect = 1e-17 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| ||||| |||| || || ||||||||||||||||| || | | || Sbjct 3365612 TGCAGGTTTGAAGAGGTGTGGGAAAAGTTGCAGACTAAGGTGGGTGAATTACCTAAGTCC 3365553 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | | ||| || || ||| |||||||||||| ||| || || ||| | || || || Sbjct 3365552 TAGTGTAAAGCGGGGTGATTTTTCAGAGGATGAAGAAGACCTCATTATTCGCCTCCATAA 3365493 Query 460 GCTTCTAGGAAACAGG 475 ||||| ||||||||| Sbjct 3365492 CCTTCTGGGAAACAGG 3365477 Score = 68.0 bits (74), Expect = 6e-09 Identities = 72/95 (76%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 ||| || |||||||||||| | ||||| || |||||||||||| || || | | ||| Sbjct 25944246 TGCTGGCTTGAACAGGTGCGGAAAGAGTTGCAGACTAAGGTGGACAAATTACCTTAGGCC 25944187 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAG 434 ||||||||| ||| |||| | || ||||||| Sbjct 25944186 TGATATCAAGAGAGGGAAGTTCTCTGAAGATGAAG 25944152 Score = 51.8 bits (56), Expect = 5e-04 Identities = 52/68 (76%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| ||||| ||| | |||||||| || || || | ||| | | || ||| Sbjct 18579837 TGTAGGTGGTCTTTGATAGCTGGGAGACTTCCGGGTAGAACAGACAATGAGATAAAGAAT 18579896 Query 1477 TACTGGAA 1484 |||||||| Sbjct 18579897 TACTGGAA 18579904 Score = 44.6 bits (48), Expect = 0.074 Identities = 53/72 (74%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| ||||||||| |||||| || |||||| || |||| | ||| | | || || Sbjct 25943965 TTGCAGGTGGTCAAGGATTGCAACAAAACTTCCTGGGCGGACCGACAATGAGATCAAGAA 25943906 Query 1476 TTACTGGAACAC 1487 ||||||||||| Sbjct 25943905 CTACTGGAACAC 25943894 Score = 41.0 bits (44), Expect = 0.90 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Minus Query 1330 ATATATTATCGCTTATTTTCAtaaaataa 1358 ||||||||| |||||||||||||| |||| Sbjct 18275415 ATATATTAT-GCTTATTTTCATAACATAA 18275388 Score = 39.2 bits (42), Expect = 3.1 Identities = 30/36 (83%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 759 TTATTTGCTCTTTGTTTTCTTGGGTGAAATTTTATA 794 ||||| || ||||||||||||| ||||| | |||| Sbjct 28916455 TTATTACCTTTTTGTTTTCTTGGCTGAAAATGTATA 28916420 >Query1 on lcl|Jm6D| Query1 on lcl|Jm6D Length=38364907 Score = 96.9 bits (106), Expect = 1e-17 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| ||||| |||| || || ||||||||||||||||| || | | || Sbjct 3348460 TGCAGGTTTGAAGAGGTGTGGGAAAAGTTGCAGACTAAGGTGGGTGAATTACCTAAGTCC 3348401 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | | ||| || || ||| |||||||||||| ||| || || ||| | || || || Sbjct 3348400 TAGTGTAAAGCGGGGTGATTTTTCAGAGGATGAAGAAGACCTCATTATTCGCCTCCATAA 3348341 Query 460 GCTTCTAGGAAACAGG 475 ||||| ||||||||| Sbjct 3348340 CCTTCTGGGAAACAGG 3348325 Score = 73.4 bits (80), Expect = 2e-10 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 ||| || |||||||||||| | ||||| || |||||||||||| || || | | ||| Sbjct 25351141 TGCTGGCTTGAACAGGTGCGGAAAGAGTTGCAGACTAAGGTGGACAAATTACCTTAGGCC 25351082 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAG 434 ||||||||| ||| |||| |||| ||||||| Sbjct 25351081 TGATATCAAGAGAGGGAAGTTCTCAGAAGATGAAG 25351047 Score = 53.6 bits (58), Expect = 1e-04 Identities = 41/49 (84%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAA 408 ||||||||||||| ||||| ||| |||||||| | |||| ||||||| Sbjct 28687372 GGAAGAGCTGTAGGCTAAGATGGATGAACTATCTCCGGCCAGATATCAA 28687420 Score = 46.4 bits (50), Expect = 0.021 Identities = 51/68 (75%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| ||||| ||| | |||||||| || | || | ||| | | || ||| Sbjct 18347517 TGTAGGTGGTCTTTGATAGCTGGGAGACTTCCGGGGCGAACAGACAATGAGATAAAGAAT 18347576 Query 1477 TACTGGAA 1484 |||||||| Sbjct 18347577 TACTGGAA 18347584 Score = 44.6 bits (48), Expect = 0.074 Identities = 49/63 (78%), Gaps = 8/63 (13%) Strand=Plus/Plus Query 1323 ATCAATAATATATTA---TCGCTTATTTTCAtaaaataaaataaaaattaaaaaaaaaaC 1379 ||||||||||| ||| || |||| ||| |||| |||| ||||| |||||||||| Sbjct 21540825 ATCAATAATATTTTACTTTCACTTA---TCACAAAAAAAAAAAAAAA--AAAAAAAAAAG 21540879 Query 1380 TAG 1382 ||| Sbjct 21540880 TAG 21540882 Score = 44.6 bits (48), Expect = 0.074 Identities = 53/72 (74%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| ||||||||| |||||| || |||||| || |||| | ||| | | || || Sbjct 25350864 TTGCAGGTGGTCAAGGATTGCAACAAAACTTCCTGGGCGGACCGACAATGAGATCAAGAA 25350805 Query 1476 TTACTGGAACAC 1487 ||||||||||| Sbjct 25350804 CTACTGGAACAC 25350793 Score = 42.8 bits (46), Expect = 0.26 Identities = 44/55 (80%), Gaps = 2/55 (4%) Strand=Plus/Minus Query 811 TTTCCTTTTACTTTAT-TCATCTT-TGTTATTGGTAAAATCTTTCAAACGCAAAC 863 |||| ||| | ||||| ||||||| | || || | ||||| ||||||||||||| Sbjct 17208124 TTTCATTTCATTTTATCTCATCTTATTTTTTTTTTTAAATCATTCAAACGCAAAC 17208070 Score = 39.2 bits (42), Expect = 3.1 Identities = 23/24 (96%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 333 GCATGGATGCAGGGTTGAACAGGT 356 ||| |||||||||||||||||||| Sbjct 3486987 GCAGGGATGCAGGGTTGAACAGGT 3487010 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1142 TTTGCGCTGCGAATTTGTATTGTATG 1167 |||| || |||||||||||||||||| Sbjct 21105971 TTTGTGCAGCGAATTTGTATTGTATG 21105996 >Query1 on lcl|Jr3S| Query1 on lcl|Jr3S Length=28458890 Score = 86.0 bits (94), Expect = 2e-14 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 || ||| || || ||||| | ||||||||||| |||||||| | |||||| ||| || Sbjct 17943860 TGTAGGTTTAAAGAGGTGTGGAAAGAGCTGTAGGTTAAGGTGGCTTAACTATCTGAGCCC 17943801 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | || ||||| || ||||||| |||| |||||| || || || || || || Sbjct 17943800 CACCGTGAAACGAGGAGGCTTCTCAGAGGAAGAAGAAGATCTCATTATCAGACTCCATAA 17943741 Query 460 GCTTCTAGGAAACAGGT 476 ||||| |||||||||| Sbjct 17943740 TCTTCTTGGAAACAGGT 17943724 Score = 48.2 bits (52), Expect = 0.006 Identities = 32/36 (89%), Gaps = 0/36 (0%) Strand=Plus/Minus Query 544 ACCCTAACCCCTaaaaacaaaacaaaaataaaaaaT 579 |||||||||||||| | |||||||| || ||||||| Sbjct 20071276 ACCCTAACCCCTAATATCAAAACAATAAAAAAAAAT 20071241 Score = 44.6 bits (48), Expect = 0.074 Identities = 32/36 (89%), Gaps = 1/36 (3%) Strand=Plus/Plus Query 1749 ACAATCGACAAGAAAATGCATCAATTTTTCTGAAGG 1784 |||||| |||||| || | ||||||||||||||||| Sbjct 2742033 ACAATC-ACAAGATAAGGTATCAATTTTTCTGAAGG 2742067 Score = 44.6 bits (48), Expect = 0.074 Identities = 32/37 (86%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 1360 ataaaaattaaaaaaaaaaCTAGCATACAAATGTATT 1396 |||||||| |||| ||||| | |||||||||||||| Sbjct 22506330 ATAAAAATAAAAATAAAAAAAATCATACAAATGTATT 22506294 Score = 42.8 bits (46), Expect = 0.26 Identities = 46/61 (75%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 |||||||||||||| | || ||| |||||| | | ||| |||| || | |||| ||| Sbjct 20235285 GGAAGAGCTGTAGATTGAGATGGACTAACTATCTCAGACCAGATATTAAAAGAGGAAAGT 20235344 Query 420 T 420 | Sbjct 20235345 T 20235345 Score = 42.8 bits (46), Expect = 0.26 Identities = 53/73 (73%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| |||| || | ||| | ||||| || || | ||| | | || || Sbjct 24049696 TGTAGGTGGTCCCTGATAGCAGGGAGATTACCAGGGAGAACAGATAATGAGATAAAGAAC 24049755 Query 1477 TACTGGAACACCC 1489 ||||||||||||| Sbjct 24049756 TACTGGAACACCC 24049768 >Query1 on lcl|Jm3S| Query1 on lcl|Jm3S Length=27832763 Score = 86.0 bits (94), Expect = 2e-14 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 || ||| || || ||||| | ||||||||||| |||||||| | |||||| ||| || Sbjct 17136424 TGTAGGTTTAAAGAGGTGTGGAAAGAGCTGTAGGTTAAGGTGGCTTAACTATCTGAGCCC 17136365 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 | | || ||||| || ||||||| |||| |||||| || || || || || || Sbjct 17136364 CACCGTGAAACGAGGAGGCTTCTCAGAGGAAGAAGAAGATCTCATTATCAGACTCCATAA 17136305 Query 460 GCTTCTAGGAAACAGGT 476 ||||| |||||||||| Sbjct 17136304 TCTTCTTGGAAACAGGT 17136288 Score = 48.2 bits (52), Expect = 0.006 Identities = 32/36 (89%), Gaps = 0/36 (0%) Strand=Plus/Plus Query 544 ACCCTAACCCCTaaaaacaaaacaaaaataaaaaaT 579 |||||||||||||| | |||||||| || ||||||| Sbjct 19403100 ACCCTAACCCCTAATATCAAAACAATAAAAAAAAAT 19403135 Score = 42.8 bits (46), Expect = 0.26 Identities = 46/61 (75%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 |||||||||||||| | || ||| |||||| | | ||| |||| || | |||| ||| Sbjct 19598823 GGAAGAGCTGTAGATTGAGATGGACTAACTATCTCAGACCAGATATTAAAAGAGGAAAGT 19598882 Query 420 T 420 | Sbjct 19598883 T 19598883 Score = 42.8 bits (46), Expect = 0.26 Identities = 41/52 (79%), Gaps = 2/52 (4%) Strand=Plus/Plus Query 1326 AATAATATATTATCGCTTATTTTCAtaaaataaaata--aaaattaaaaaaa 1375 ||||||||||| | ||| |||| | | |||||||| |||| |||||||| Sbjct 21768541 AATAATATATTTTAATTTAATTTCTTGATATAAAATAGGAAAAATAAAAAAA 21768592 Score = 42.8 bits (46), Expect = 0.26 Identities = 53/73 (73%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| |||| || | ||| | ||||| || || | ||| | | || || Sbjct 23384092 TGTAGGTGGTCCCTGATAGCAGGGAGATTACCAGGGAGAACAGATAATGAGATAAAGAAC 23384151 Query 1477 TACTGGAACACCC 1489 ||||||||||||| Sbjct 23384152 TACTGGAACACCC 23384164 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 1756 ACAAGAAAATGCATCAATTTTTCTGAAGG 1784 |||||| || | ||||||||||||||||| Sbjct 3254697 ACAAGATAAGGTATCAATTTTTCTGAAGG 3254725 Score = 39.2 bits (42), Expect = 3.1 Identities = 53/69 (77%), Gaps = 5/69 (7%) Strand=Plus/Minus Query 1312 TTTATTTGTTCATCAATAATATATTATCGCTTATTTTCAtaaaat--aaaataa-aaatt 1368 |||||| || || ||||||||||||| |||||| ||| ||| | ||||| ||||| Sbjct 22329835 TTTATTA-TTAATTAATAATATATTATTTTATATTTT-ATATAATCAATAATAATAAATT 22329778 Query 1369 aaaaaaaaa 1377 | | ||||| Sbjct 22329777 AGATAAAAA 22329769 >Query1 on lcl|Jr6S| Query1 on lcl|Jr6S Length=24894769 Score = 82.4 bits (90), Expect = 3e-13 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| | ||| ||||||| || ||||| || ||| |||| ||| ||| || Sbjct 16164156 TGCAGGTTTGAATCGATGCGGGAAGAGTTGCAGACTGAGATGGCTGAATTATCTGAGACC 16164215 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 || ||||| | ||| | | |||| | |||| || | ||| ||||||| || || Sbjct 16164216 CAACATCAAAAGAGGCAACATCTCAGATGCAGAAGAGGACTTGATACTTAGGCTGCATAA 16164275 Query 460 GCTTCTAGGAAACAGGTA 477 ||| || ||||||||||| Sbjct 16164276 GCTACTGGGAAACAGGTA 16164293 Score = 50.0 bits (54), Expect = 0.002 Identities = 56/75 (75%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| |||||||| |||||| | ||||||||| ||||||| ||| | | || || Sbjct 18167106 TTGCAGGTGGTCTAGGATTGCAATCAAACTTCCAGGGAGGACTGACAATGAGATCAAGAA 18167047 Query 1476 TTACTGGAACACCCG 1490 ||||||||||| || Sbjct 18167046 CTACTGGAACACTCG 18167032 Score = 46.4 bits (50), Expect = 0.021 Identities = 48/63 (76%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1423 TGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGG 1482 ||||| | |||||| |||||||||||||| | |||| ||| | | || || || ||| Sbjct 19499025 TGGTCTCTAATTGCTGGAAGACTTCCAGGCCGAACTGACAATGAGATCAAGAACTATTGG 19499084 Query 1483 AAC 1485 ||| Sbjct 19499085 AAC 19499087 Score = 42.8 bits (46), Expect = 0.26 Identities = 48/62 (77%), Gaps = 7/62 (11%) Strand=Plus/Minus Query 1316 TTTGTTCATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaaa 1375 ||||||||||| | |||||| || || ||| |||| ||||||||||| |||| || Sbjct 14887047 TTTGTTCATCATTCATATATCAT---ATA-TTTGATAA---AAAATAAAAATAAAAATAA 14886995 Query 1376 aa 1377 || Sbjct 14886994 AA 14886993 Score = 41.0 bits (44), Expect = 0.90 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1747 CCACAATCGACAAGAAAATGCATCA 1771 |||||||||||||||||||||| || Sbjct 9179882 CCACAATCGACAAGAAAATGCAGCA 9179906 Score = 41.0 bits (44), Expect = 0.90 Identities = 33/39 (85%), Gaps = 2/39 (5%) Strand=Plus/Minus Query 553 CCTaaaaacaaaacaaaaataaaaaa--TACGAACATGT 589 |||||||| |||| |||| |||||| ||||||||||| Sbjct 24614057 CCTAAAAAAAAAATAAAAGAAAAAAAGATACGAACATGT 24614019 Score = 39.2 bits (42), Expect = 3.1 Identities = 44/59 (75%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 356 TGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGG 414 ||| | ||||||||||| || | |||| ||| | | | ||| ||| |||||||||| Sbjct 23959619 TGCGGCAAGAGCTGTAGGCTCCGATGGGCTAACCACCTCAGGCCCAATCTCAAGAAAGG 23959561 >Query1 on lcl|Jm6S| Query1 on lcl|Jm6S Length=22373256 Score = 82.4 bits (90), Expect = 3e-13 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||| ||||| | ||| ||||||| || ||||| || ||| | || ||| ||| || Sbjct 13952661 TGCAGGTTTGAATCGATGCGGGAAGAGTTGCAGACTGAGATGGCTAAATTATCTGAGACC 13952720 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 || ||||| | ||| | | |||| | ||||| || | ||| ||||||| || || Sbjct 13952721 CAACATCAAAAGAGGCAACATCTCAGATGCTGAAGAGGACTTGATACTTAGGCTGCATAA 13952780 Query 460 GCTTCTAGGAAACAGGTA 477 ||| || ||||||||||| Sbjct 13952781 GCTACTGGGAAACAGGTA 13952798 Score = 50.0 bits (54), Expect = 0.002 Identities = 54/72 (75%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| |||||||| |||||| | ||||||||| ||||||| ||| | | || || Sbjct 15762640 TTGCAGGTGGTCTAGGATTGCAACCAAACTTCCAGGGAGGACTGACAATGAGATCAAGAA 15762581 Query 1476 TTACTGGAACAC 1487 ||||||||||| Sbjct 15762580 CTACTGGAACAC 15762569 Score = 46.4 bits (50), Expect = 0.021 Identities = 48/63 (76%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1423 TGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGG 1482 ||||| | |||||| |||||||||||||| | |||| ||| | | || || || ||| Sbjct 17099930 TGGTCTCTAATTGCTGGAAGACTTCCAGGCCGAACTGACAATGAGATCAAGAACTATTGG 17099989 Query 1483 AAC 1485 ||| Sbjct 17099990 AAC 17099992 Score = 42.8 bits (46), Expect = 0.26 Identities = 41/52 (79%), Gaps = 2/52 (4%) Strand=Plus/Minus Query 1309 ACTTT--TATTTGTTCATCAATAATATATTATCGCTTATTTTCAtaaaataa 1358 ||||| ||||| || | ||||||||||||||| |||| | |||| |||| Sbjct 9489310 ACTTTCATATTTTTTAAATAATAATATATTATCGATTATAATAATAATATAA 9489259 Score = 42.8 bits (46), Expect = 0.26 Identities = 33/38 (87%), Gaps = 1/38 (3%) Strand=Plus/Minus Query 553 CCTaaaaacaaaacaaaaataaaaa-aTACGAACATGT 589 ||||||| ||||||| || ||||| |||||||||||| Sbjct 22093373 CCTAAAAGAAAAACAAGAAAAAAAAGATACGAACATGT 22093336 Score = 41.0 bits (44), Expect = 0.90 Identities = 24/25 (96%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 1747 CCACAATCGACAAGAAAATGCATCA 1771 |||||||||||||||||||||| || Sbjct 8504434 CCACAATCGACAAGAAAATGCAGCA 8504458 Score = 39.2 bits (42), Expect = 3.1 Identities = 32/38 (84%), Gaps = 2/38 (5%) Strand=Plus/Minus Query 612 ttttcttttttttttGTCTC--GAAAGGACAAAATAAG 647 |||||||||| |||| |||| | | |||||||||||| Sbjct 123385 TTTTCTTTTTCTTTTCTCTCTTGTATGGACAAAATAAG 123348 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 247 TTGTAACAAAGACAAAAACGAAGTTT 272 |||||||||||| |||||||||| || Sbjct 12989624 TTGTAACAAAGAGAAAAACGAAGATT 12989599 Score = 39.2 bits (42), Expect = 3.1 Identities = 42/53 (79%), Gaps = 2/53 (4%) Strand=Plus/Minus Query 1327 ATAATATATTAT-CGCTTATTTTCAtaaaataaaataaaaattaaaaaaaaaa 1378 |||||||||||| |||| ||| |||||||||| | || |||| |||| || Sbjct 13544479 ATAATATATTATATAATTATATTC-TAAAATAAAAAATAATTTAATAAAATAA 13544428 Score = 39.2 bits (42), Expect = 3.1 Identities = 44/59 (75%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 356 TGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGG 414 ||| | ||||||||||| || | |||| ||| | | | ||| ||| |||||||||| Sbjct 21444969 TGCGGCAAGAGCTGTAGGCTCCGATGGGCTAACCACCTCAGGCCCAATCTCAAGAAAGG 21444911 >Query1 on lcl|Jr1S| Query1 on lcl|Jr1S Length=29818788 Score = 73.4 bits (80), Expect = 2e-10 Identities = 99/138 (72%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 |||||||| | || || || ||||||| || | ||||||||| |||| ||| | | | Sbjct 24499640 ATGCAGGGCTTAAGAGATGTGGGAAGAGTTGCCGGCTAAGGTGGTTGAATTATCTAAGAC 24499581 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | | ||||||| ||| | | | | ||||||| || || || || |||||||||| Sbjct 24499580 CTGAAATCAAGAGAGGCAACATAACCAATGATGAAGAGGAGCTTATTATCAGGCTTCACA 24499521 Query 459 AGCTTCTAGGAAACAGGT 476 | || | |||||||||| Sbjct 24499520 AACTCTTGGGAAACAGGT 24499503 Score = 66.2 bits (72), Expect = 2e-08 Identities = 56/69 (81%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||||||||| ||| |||||||||||||| | ||||||||||| ||| ||| |||| Sbjct 21654177 CAGGGTTGAAAAGGAATGGGAAGAGCTGTAGATTGAGGTGGGTGAATTATCTGAGGCCAG 21654118 Query 402 ATATCAAGA 410 | |||||| Sbjct 21654117 ACCTCAAGA 21654109 Score = 64.4 bits (70), Expect = 8e-08 Identities = 97/138 (70%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 |||||||| | || || || ||||||| || | ||||||||| |||| ||| | | | Sbjct 24515850 ATGCAGGGCTTAAGAGATGTGGGAAGAGTTGCCGGCTAAGGTGGTTGAATTATCTAAGAC 24515791 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || |||| ||| | | | | ||||||| || || || || |||||||||| Sbjct 24515790 CTGGAATTAAGAGAGGCAACATAACCAATGATGAAGAGGAGCTTATTATCAGGCTTCACA 24515731 Query 459 AGCTTCTAGGAAACAGGT 476 | || | |||||||||| Sbjct 24515730 AACTCTTGGGAAACAGGT 24515713 Score = 55.4 bits (60), Expect = 4e-05 Identities = 95/138 (69%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 || ||| |||| | ||| | ||||| |||||||| || ||| |||| || ||| || Sbjct 24485631 TGAAGGTCTGAATCGATGCGGTAAGAGTTGTAGACTGAGATGGCTGAATTACCTGAGACC 24485690 Query 400 AAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAA 459 || ||||||| ||| | | | | | |||| ||| | || | ||||| || || Sbjct 24485691 CAACATCAAGAGAGGGAATATATCTGCCCAAGAAGAGGATTTGATTCTGAGGCTCCATAA 24485750 Query 460 GCTTCTAGGAAACAGGTA 477 || || ||||||||||| Sbjct 24485751 ACTACTGGGAAACAGGTA 24485768 Score = 50.0 bits (54), Expect = 0.002 Identities = 30/32 (94%), Gaps = 0/32 (0%) Strand=Plus/Minus Query 607 tttttttttcttttttttttGTCTCGAAAGGA 638 ||||||||| |||||||||| ||||||||||| Sbjct 6573134 TTTTTTTTTTTTTTTTTTTTATCTCGAAAGGA 6573103 Score = 44.6 bits (48), Expect = 0.074 Identities = 54/74 (73%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 1415 ATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAA 1474 |||| || ||||| |||| ||| | | ||||| || || || | ||| | | || | Sbjct 24499412 ATTGCAGATGGTCCCTGATAGCTGGGCGGCTTCCTGGAAGAACAGACAATGAAATCAAGA 24499353 Query 1475 ATTACTGGAACACC 1488 |||||||||||||| Sbjct 24499352 ATTACTGGAACACC 24499339 Score = 41.0 bits (44), Expect = 0.90 Identities = 35/41 (85%), Gaps = 2/41 (5%) Strand=Plus/Plus Query 1323 ATCAATAATATATTATCGCTTA-TTTTCAtaaaataaaata 1362 || ||||||||||||||| ||| || ||| |||| |||||| Sbjct 21167001 ATTAATAATATATTATCGATTACTTATCA-AAAAAAAAATA 21167040 Score = 41.0 bits (44), Expect = 0.90 Identities = 51/70 (73%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 ||||||||| ||||||||||| | ||||| || || | ||| | | || || ||| Sbjct 21653944 AGGTGGTCAGCAATTGCTCGAAGCTTGCCAGGAAGAACAGACAATGAGATCAAGAACTAC 21653885 Query 1480 TGGAACACCC 1489 |||| |||| Sbjct 21653884 TGGAGGACCC 21653875 Score = 41.0 bits (44), Expect = 0.90 Identities = 48/65 (74%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 |||||||| |||||||| ||||| | || || | || | ||| | | || |||||| Sbjct 24485854 AGGTGGTCTCTGATTGCTGGAAGATTACCGGGACGAACAGATAATGAGATAAAGAATTAC 24485913 Query 1480 TGGAA 1484 ||||| Sbjct 24485914 TGGAA 24485918 Score = 41.0 bits (44), Expect = 0.90 Identities = 65/91 (71%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 1399 CTTTCTCATGCTATGT-ATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGAC 1457 || ||||||| | | | |||| || ||||| |||| ||| | | ||||| || | || Sbjct 24515649 CTGTCTCATG-TGTCTCATTGCAGATGGTCTCTGATAGCTGGGCGGCTTCCCGGACGAAC 24515591 Query 1458 TGCGAATAATGTGAAAAATTACTGGAACACC 1488 | ||| | | || ||||||||||||||| Sbjct 24515590 GGACAATGAAATCAAGAATTACTGGAACACC 24515560 Score = 41.0 bits (44), Expect = 0.90 Identities = 40/51 (78%), Gaps = 3/51 (6%) Strand=Plus/Minus Query 1328 TAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaaaaaa 1378 ||||||||||| |||||||| || |||| ||| || |||||||||| Sbjct 29729097 TAATATATTATATATTATTTTCTGAA---AAAAAAAAGATAAAAAAAAAAA 29729050 Score = 39.2 bits (42), Expect = 3.1 Identities = 33/40 (83%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 798 ATGTTGGGCTCCTTTTCCTTTTACTTTATTCATCTTTGTT 837 |||||| || ||| ||||||||| ||||||||||| || Sbjct 3507954 ATGTTGTGCCCCTG--CCTTTTACTATATTCATCTTTCTT 3507991 Score = 39.2 bits (42), Expect = 3.1 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 605 GCtttttttttcttttttttttGTCTCGAAAGGA 638 |||| |||| | |||| ||||| ||||||||||| Sbjct 6523823 GCTTCTTTTATTTTTTATTTTTTTCTCGAAAGGA 6523790 Score = 39.2 bits (42), Expect = 3.1 Identities = 41/53 (77%), Gaps = 1/53 (2%) Strand=Plus/Minus Query 1352 aaaataaaataaaaattaaaaaaaaa-aCTAGCATACAAATGTATTAACTTTC 1403 ||||||||| || ||||||||| || | || ||| | | ||||||||||| Sbjct 8056227 AAAATAAAAATAATATTAAAAAATAATATTATAATAATATTTTATTAACTTTC 8056175 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1371 aaaaaaaaCTAGCATACAAATGTATT 1396 |||||||||||| |||||||||||| Sbjct 21082761 AAAAAAAACTAGTTTACAAATGTATT 21082786 >Query1 on lcl|Jr1D| Query1 on lcl|Jr1D Length=51893103 Score = 69.8 bits (76), Expect = 2e-09 Identities = 58/71 (82%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||||||||| ||| | |||||||||||||| ||||||||||| ||| ||| ||| Sbjct 38361839 TGCAGGGTTGAAAAGGAATGGAAAGAGCTGTAGACTGAGGTGGGTGAATTATCTGAGGCC 38361780 Query 400 AAATATCAAGA 410 | | |||||| Sbjct 38361779 AGACCTCAAGA 38361769 Score = 57.2 bits (62), Expect = 1e-05 Identities = 60/79 (76%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 1410 TATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGT 1469 ||| ||||| || ||||| ||||| ||| | | ||||||||| | || | ||| | | Sbjct 43330881 TATATATTGCAGATGGTCTTTGATAGCTGGGCGGCTTCCAGGCCGAACAGACAATGAAAT 43330822 Query 1470 GAAAAATTACTGGAACACC 1488 ||||| |||||||||||| Sbjct 43330821 CAAAAACTACTGGAACACC 43330803 Score = 53.6 bits (58), Expect = 1e-04 Identities = 57/74 (77%), Gaps = 6/74 (8%) Strand=Plus/Minus Query 1320 TTCATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaaaaaa- 1378 || || ||||||||||||| || | | | ||| |||||| |||||||||||||||| Sbjct 50719239 TTTATGAATAATATATTAT---TTTTATAAAAAAATTAAAATTAAAATTAAAAAAAAAAC 50719183 Query 1379 --CTAGCATACAAA 1390 ||| | |||||| Sbjct 50719182 ACCTATCTTACAAA 50719169 Score = 50.0 bits (54), Expect = 0.002 Identities = 92/135 (68%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 ||||| | || || || ||||||| || ||||||| ||| | || ||| | || Sbjct 43348566 CAGGGCTTAAGAGATGTGGGAAGAGTTGCCGACTAAGATGGATAAATTATCTTCGACCTG 43348507 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGC 461 |||| |||||||| | | | || |||| || || || |||||||||||||| | Sbjct 43348506 ATATTAAGAAAGGCAACATAACCAGTGACGAAGAGGAGCTCATTATTAGGCTTCACAATC 43348447 Query 462 TTCTAGGAAACAGGT 476 | | || || |||| Sbjct 43348446 TCTTGGGGAATAGGT 43348432 Score = 46.4 bits (50), Expect = 0.021 Identities = 52/70 (74%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 ||||||||| ||||||||||| | ||||| || |||| ||| | | || || ||| Sbjct 38361621 AGGTGGTCAACAATTGCTCGAAGCTTGCCAGGGAGAACTGACAATGAGATCAAGAACTAC 38361562 Query 1480 TGGAACACCC 1489 |||| |||| Sbjct 38361561 TGGAGGACCC 38361552 Score = 44.6 bits (48), Expect = 0.074 Identities = 36/43 (84%), Gaps = 3/43 (7%) Strand=Plus/Plus Query 1328 TAATATATTATCGCTTATTTTC---Ataaaataaaataaaaat 1367 ||||||||||| | ||| || | |||||||||||||||||| Sbjct 51198182 TAATATATTATTGATTACTTACAAAATAAAATAAAATAAAAAT 51198224 Score = 41.0 bits (44), Expect = 0.90 Identities = 34/42 (81%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 362 AAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAAT 403 |||||||| |||||||||||| | || ||| | | |||| || Sbjct 45885299 AAGAGCTGCAGACTAAGGTGGATAAATTATCTTAGGCCAGAT 45885340 >Query1 on lcl|Jm1D| Query1 on lcl|Jm1D Length=49856174 Score = 69.8 bits (76), Expect = 2e-09 Identities = 58/71 (82%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 340 TGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCC 399 |||||||||||| ||| | |||||||||||||| ||||||||||| ||| ||| ||| Sbjct 36206679 TGCAGGGTTGAAAAGGAATGGAAAGAGCTGTAGACTGAGGTGGGTGAATTATCTGAGGCC 36206620 Query 400 AAATATCAAGA 410 | | |||||| Sbjct 36206619 AGACCTCAAGA 36206609 Score = 53.6 bits (58), Expect = 1e-04 Identities = 61/82 (74%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 1407 TGCTATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAA 1466 || ||| || || || ||||| ||||| ||| | | ||||||||| | || | ||| | Sbjct 41112037 TGATATATACTGCAGATGGTCTTTGATAGCTGGGCGGCTTCCAGGCCGAACAGACAATGA 41111978 Query 1467 TGTGAAAAATTACTGGAACACC 1488 | ||||| |||||||||||| Sbjct 41111977 AATCAAAAACTACTGGAACACC 41111956 Score = 46.4 bits (50), Expect = 0.021 Identities = 52/70 (74%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 ||||||||| ||||||||||| | ||||| || |||| ||| | | || || ||| Sbjct 36206457 AGGTGGTCAACAATTGCTCGAAGCTTGCCAGGAAGAACTGACAATGAGATCAAGAACTAC 36206398 Query 1480 TGGAACACCC 1489 |||| |||| Sbjct 36206397 TGGAGGACCC 36206388 Score = 46.4 bits (50), Expect = 0.021 Identities = 91/135 (67%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 ||||| | || || || | ||||| || ||||||| ||| | || ||| | || Sbjct 41139672 CAGGGCTTAAGAGATGTGGAAAGAGTTGCCGACTAAGATGGATAAATTATCTTCGACCTG 41139613 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGC 461 |||| |||||||| | | | || |||| || || || |||||||||||||| | Sbjct 41139612 ATATTAAGAAAGGCAACATAACCAGTGACGAAGAGGAGCTCATTATTAGGCTTCACAATC 41139553 Query 462 TTCTAGGAAACAGGT 476 | | || || |||| Sbjct 41139552 TATTGGGGAATAGGT 41139538 Score = 41.0 bits (44), Expect = 0.90 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 464 CTAGGAAACAGGTACCAATAAATAAAT 490 |||||||||| ||| |||||||||||| Sbjct 11449542 CTAGGAAACAAGTAACAATAAATAAAT 11449568 Score = 41.0 bits (44), Expect = 0.90 Identities = 46/59 (78%), Gaps = 7/59 (12%) Strand=Plus/Plus Query 1323 ATCAATAATATATTATCGCTTATTT--TCA-taaaataaaataaaaattaaaaaaaaaa 1378 ||||||||||| || |||| || ||| ||||||||||| |||| |||| ||||| Sbjct 43129984 ATCAATAATAT----TCACTTACTTAATCACTAAAATAAAATTAAAAAAAAAACAAAAA 43130038 Score = 39.2 bits (42), Expect = 3.1 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 1327 ATAATATATTATCGCTTATTTTCAtaaaataaaataaaaat 1367 |||||||||||| | ||||| | |||| ||| |||| ||| Sbjct 11633547 ATAATATATTATAGATTATTATAATAATATATTATAATAAT 11633587 Score = 39.2 bits (42), Expect = 3.1 Identities = 33/41 (80%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 815 CTTTTACTTTATTCATCTTTGTTATTGGTAAAATCTTTCAA 855 ||||||||||||||||| | ||| || ||||| | |||| Sbjct 12431733 CTTTTACTTTATTCATCGTGTTTAAAGGAAAAATTTGTCAA 12431693 Score = 39.2 bits (42), Expect = 3.1 Identities = 54/74 (73%), Gaps = 4/74 (5%) Strand=Plus/Plus Query 22 GTGAGAAAAGGAGCTTGGACTAGAGAGGAAG--ATGATCTTCTGAGGCAGTGCATTGAGA 79 ||||||||||| | ||||| | || |||| |||| |||||| | | |||| | Sbjct 38649533 GTGAGAAAAGGGCCATGGACCATGGAAGAAGACATGA--TTCTGATCAATTATATTGCAA 38649590 Query 80 ATCAAGGTGAAGGA 93 |||| ||||||||| Sbjct 38649591 ATCACGGTGAAGGA 38649604 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 718 ACCTAGCAAAAATTAAATTAATATAT 743 ||||| | |||||||||||||||||| Sbjct 47919767 ACCTAACTAAAATTAAATTAATATAT 47919792 >Query1 on lcl|Jm8D| Query1 on lcl|Jm8D Length=36225362 Score = 68.0 bits (74), Expect = 6e-09 Identities = 82/111 (74%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 368 TGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGTTTGCAGAG 427 ||||||| |||||| || ||||| | || |||||||||| ||| || || || Sbjct 17523261 TGTAGACAGAGGTGGTTGTACTATCTACGACCCAATATCAAGAGAGGGGACTTCTCAATA 17523202 Query 428 GATGAAGTAGATCTAATAATTA---GGCTTCACAAGCTTCTAGGAAACAGG 475 |||||||| |||||||| || | |||| || | ||| ||||||||||| Sbjct 17523201 GATGAAGTGGATCTAATGATCATCAGGCTCCATAGGCTCTTAGGAAACAGG 17523151 Score = 57.2 bits (62), Expect = 1e-05 Identities = 82/116 (71%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 ||||||| || || || || ||| |||| ||| | | || ||||| || | || | Sbjct 17284896 GGAAGAGTTGCAGGCTGAGATGGATGAATTATCTTAGACCCAATATTAAAAGGGGCAATA 17284955 Query 420 TTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAGG 475 | | || | |||| ||| ||||| |||||||||| || || ||||||||||| Sbjct 17284956 TATCTGACCAAGAAGAGGATTTAATACTTAGGCTTCATAAACTCATAGGAAACAGG 17285011 Score = 55.4 bits (60), Expect = 4e-05 Identities = 51/65 (78%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 |||||||| ||||||||| ||||||| || || | |||| ||| | | || |||||| Sbjct 17285173 AGGTGGTCTTTGATTGCTGGAAGACTACCGGGTCGAACTGATAATGAGATTAAGAATTAC 17285232 Query 1480 TGGAA 1484 ||||| Sbjct 17285233 TGGAA 17285237 Score = 39.2 bits (42), Expect = 3.1 Identities = 56/79 (71%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 |||||||||||||| | || ||| | || | || | |||| ||||| | | | | Sbjct 31306786 GGAAGAGCTGTAGATTGAGATGGTTTAATCAGCTGGACCCAAGAATCAATAGAAGCCCTT 31306727 Query 420 TTGCAGAGGATGAAGTAGA 438 || |||| ||||||| ||| Sbjct 31306726 TTACAGAAGATGAAGAAGA 31306708 Score = 39.2 bits (42), Expect = 3.1 Identities = 29/34 (85%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 1334 ATTATCGCTTATTTTCAtaaaataaaataaaaat 1367 |||||||||||||| ||||||||||| |||| Sbjct 32745592 ATTATCGCTTATTTATTTAAAATAAAATTCAAAT 32745625 >Query1 on lcl|Jm4S| Query1 on lcl|Jm4S Length=27577207 Score = 64.4 bits (70), Expect = 8e-08 Identities = 97/138 (70%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 |||||||| | || || || ||||||| || | ||||||||| |||| ||| | | | Sbjct 3070497 ATGCAGGGCTTAAGAGATGTGGGAAGAGTTGCCGGCTAAGGTGGTTGAATTATCTAAGAC 3070556 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || |||| ||| | | | | ||||||| || || || || |||||||||| Sbjct 3070557 CTGGAATTAAGAGAGGCAACATAACCAATGATGAAGAGGAGCTTATTATCAGGCTTCACA 3070616 Query 459 AGCTTCTAGGAAACAGGT 476 | || | |||||||||| Sbjct 3070617 AACTCTTGGGAAACAGGT 3070634 Score = 48.2 bits (52), Expect = 0.006 Identities = 39/46 (85%), Gaps = 1/46 (2%) Strand=Plus/Plus Query 1350 Ataaaataaaataaaaattaaaaa-aaaaaCTAGCATACAAATGTA 1394 |||||| |||||||||| |||||| ||||| | ||||||||||| Sbjct 5506174 ATAAAAAAAAATAAAAAATAAAAATAAAAAGCAATATACAAATGTA 5506219 Score = 42.8 bits (46), Expect = 0.26 Identities = 74/107 (69%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| | || || ||| | || || || | || || ||| | |||||| | |||| Sbjct 5436606 CAGGTCTTAAGAGATGCGGCAAAAGTTGCCGGCTTAGATGGTTAAACTATCTCCGCCCAA 5436547 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATT 448 |||||||| | |||| ||| |||| || || ||||| |||||| Sbjct 5436546 ATATCAAGCATGGAGGATTTTCAGAAGAGGA---AGATCACATAATT 5436503 Score = 41.0 bits (44), Expect = 0.90 Identities = 51/70 (73%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| || ||||| ||||||| | || || ||||| || || | ||| | | || || Sbjct 1879789 TTGCAGATGGTCTCTGATTGCAGGGAGGCTACCAGGAAGAACAGACAATGAAATCAAGAA 1879730 Query 1476 TTACTGGAAC 1485 |||||||||| Sbjct 1879729 TTACTGGAAC 1879720 Score = 41.0 bits (44), Expect = 0.90 Identities = 65/91 (71%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 1399 CTTTCTCATGCTATGT-ATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGAC 1457 || ||||||| | | | |||| || ||||| |||| ||| | | ||||| || | || Sbjct 3070694 CTGTCTCATG-TGTCTCATTGCAGATGGTCTCTGATAGCTGGGCGGCTTCCTGGTCGAAC 3070752 Query 1458 TGCGAATAATGTGAAAAATTACTGGAACACC 1488 | ||| | | || ||||||||||||||| Sbjct 3070753 GGATAATGAAATCAAGAATTACTGGAACACC 3070783 >Query1 on lcl|Jm1S| Query1 on lcl|Jm1S Length=30169828 Score = 64.4 bits (70), Expect = 8e-08 Identities = 55/68 (81%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 343 AGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAA 402 ||||||||| ||| |||||||||| ||| | ||||||||||| ||||||| |||| | Sbjct 21544383 AGGGTTGAAAAGGAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATTTGAGGCCAGA 21544324 Query 403 TATCAAGA 410 |||||| Sbjct 21544323 CCTCAAGA 21544316 Score = 64.4 bits (70), Expect = 8e-08 Identities = 97/138 (70%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 |||||||| | || || || ||||||| || | ||||||||| |||| ||| | | | Sbjct 24705301 ATGCAGGGCTTAAGAGATGTGGGAAGAGTTGCCGGCTAAGGTGGTTGAATTATCTAAGAC 24705242 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || |||| ||| | | | | ||||||| || || || || |||||||||| Sbjct 24705241 CTGGAATTAAGAGAGGCAACATAACCAATGATGAAGAGGAGCTTATTATCAGGCTTCACA 24705182 Query 459 AGCTTCTAGGAAACAGGT 476 | || | |||||||||| Sbjct 24705181 AACTCTTGGGAAACAGGT 24705164 Score = 60.8 bits (66), Expect = 1e-06 Identities = 96/138 (70%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 339 ATGCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGC 398 |||||||| | || || || | ||||| || | ||||||||| |||| ||| | | | Sbjct 24666348 ATGCAGGGCTTAAGAGATGTGGAAAGAGTTGCCGGCTAAGGTGGTTGAATTATCTAAGAC 24666289 Query 399 CAAATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACA 458 | || |||| ||| | | | | ||||||| || || || || |||||||||| Sbjct 24666288 CTGGAATTAAGAGAGGCAACATAACCAATGATGAAGAGGAGCTTATTATCAGGCTTCACA 24666229 Query 459 AGCTTCTAGGAAACAGGT 476 | || | |||||||||| Sbjct 24666228 AACTCTTGGGAAACAGGT 24666211 Score = 51.8 bits (56), Expect = 5e-04 Identities = 81/116 (70%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 362 AAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGTTT 421 ||||| |||||||| || ||| |||| || ||| || || ||||||| ||| | | Sbjct 24649328 AAGAGTTGTAGACTGAGATGGCTGAATTACCTGAGACCCAACATCAAGAGAGGGAATATA 24649387 Query 422 GCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAGGTA 477 | | | |||| ||| | || | ||||| || || || || ||||||||||| Sbjct 24649388 TCTGCCCAAGAAGAGGATTTGATTCTGAGGCTCCATAAACTACTGGGAAACAGGTA 24649443 Score = 44.6 bits (48), Expect = 0.074 Identities = 66/91 (73%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 1399 CTTTCTCATGCTATGT-ATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGAC 1457 || ||||||| ||| | |||| || ||||| |||| ||| | | ||||| || | || Sbjct 24705104 CTGTCTCATG-TATCTCATTGCAGATGGTCTCTGATAGCTGGGCGGCTTCCTGGACGAAC 24705046 Query 1458 TGCGAATAATGTGAAAAATTACTGGAACACC 1488 | ||| | | || ||||||||||||||| Sbjct 24705045 GGACAATGAAATCAAGAATTACTGGAACACC 24705015 Score = 42.8 bits (46), Expect = 0.26 Identities = 29/33 (88%), Gaps = 0/33 (0%) Strand=Plus/Plus Query 611 tttttcttttttttttGTCTCGAAAGGACAAAA 643 ||||| |||||||||| || | ||||||||||| Sbjct 1860035 TTTTTTTTTTTTTTTTTTCACAAAAGGACAAAA 1860067 Score = 41.0 bits (44), Expect = 0.90 Identities = 34/39 (87%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 1354 aataaaataaaaattaaaaaaa-aaaCT-AGCATACAAA 1390 || |||| ||||||||||||| ||||| |||||||||| Sbjct 6843987 AAAAAAACTAAAATTAAAAAAATAAACTTAGCATACAAA 6844025 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 1371 aaaaaaaaCTAGCATACAAATGTATT 1396 |||||||||||| |||||||||||| Sbjct 20766027 AAAAAAAACTAGTTTACAAATGTATT 20766052 >Query1 on lcl|Jr8D| Query1 on lcl|Jr8D Length=35197335 Score = 60.8 bits (66), Expect = 1e-06 Identities = 83/116 (72%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 ||||||| || || || || ||| |||| ||| | | || ||||| || | || | Sbjct 17054337 GGAAGAGTTGCAGGCTGAGATGGATGAATTATCTTAGACCCAATATTAAAAGGGGCAATA 17054396 Query 420 TTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAGG 475 | | || | |||| ||| ||||| |||||||||| || || |||||||||||| Sbjct 17054397 TATCTGACCAAGAAGAGGATTTAATACTTAGGCTTCATAAACTCCTAGGAAACAGG 17054452 Score = 55.4 bits (60), Expect = 4e-05 Identities = 51/65 (78%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 |||||||| ||||||||| ||||||| || || | |||| ||| | | || |||||| Sbjct 17054724 AGGTGGTCTTTGATTGCTGGAAGACTACCGGGTCGAACTGATAATGAGATTAAGAATTAC 17054783 Query 1480 TGGAA 1484 ||||| Sbjct 17054784 TGGAA 17054788 Score = 39.2 bits (42), Expect = 3.1 Identities = 56/79 (71%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 |||||||||||||| | || ||| | || | || | |||| ||||| | | | | Sbjct 30507890 GGAAGAGCTGTAGATTGAGATGGTTCAATCAGCTGGACCCAAGAATCAATAGAAGCCCTT 30507831 Query 420 TTGCAGAGGATGAAGTAGA 438 || |||| ||||||| ||| Sbjct 30507830 TTACAGAAGATGAAGAAGA 30507812 >Query1 on lcl|Jm4D| Query1 on lcl|Jm4D Length=35629462 Score = 60.8 bits (66), Expect = 1e-06 Identities = 69/93 (74%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| | || || ||| ||||||||||| | || || ||| |||| ||| | ||||| Sbjct 4370860 CAGGTCTTAAGAGATGCGGGAAGAGCTGTCGCCTTAGATGGTTGAATTATCTCCGGCCAA 4370801 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAG 434 | || ||| | || | |||| ||||||| |||| Sbjct 4370800 ACATTAAGCATGGTGGGTTTTCAGAGGAAGAAG 4370768 Score = 59.0 bits (64), Expect = 3e-06 Identities = 68/92 (74%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 341 GCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCA 400 ||||| | ||||| ||| | ||||||||||| |||| ||| ||| || |||| ||| Sbjct 30368199 GCAGGTCTAAACAGATGCGGCAAGAGCTGTAGGTTAAGATGGACGAATTACTTGAGGCCG 30368140 Query 401 AATATCAAGAAAGGAGAGTTTGCAGAGGATGA 432 ||||||||| ||| | ||| | | ||||| Sbjct 30368139 GATATCAAGAGAGGGAAATTTTCTCAAGATGA 30368108 Score = 55.4 bits (60), Expect = 4e-05 Identities = 68/93 (73%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| | || |||||| | ||||| || | || |||||| ||||||| | |||| Sbjct 29458240 CAGGCCTTAAGAGGTGCGGAAAGAGTTGCCGCCTTAGGTGGTTGAACTACCTCCGCCCAA 29458299 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAG 434 |||||||| | |||| ||| |||| || |||| Sbjct 29458300 ATATCAAGCACGGAGGTTTTTCAGAAGAGGAAG 29458332 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 562 aaaacaaaaataaaaaaTACGAACATGTGCCAGCA 596 ||||||||||||||| | | || ||||||||||| Sbjct 3724694 AAAACAAAAATAAAACAAAACAAAATGTGCCAGCA 3724660 Score = 39.2 bits (42), Expect = 3.1 Identities = 43/56 (77%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 1323 ATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaaaaaa 1378 ||||||||||| ||| ||| || | |||| |||| ||||| |||||||||| Sbjct 34855715 ATCAATAATAT-TTACTTCTTGCTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 34855661 >Query1 on lcl|Jr4D| Query1 on lcl|Jr4D Length=35878018 Score = 59.0 bits (64), Expect = 3e-06 Identities = 68/92 (74%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 341 GCAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCA 400 ||||| | ||||| ||| | ||||||||||| |||| ||| ||| || |||| ||| Sbjct 30626388 GCAGGTCTAAACAGATGCGGCAAGAGCTGTAGGTTAAGATGGACGAATTACTTGAGGCCG 30626329 Query 401 AATATCAAGAAAGGAGAGTTTGCAGAGGATGA 432 ||||||||| ||| | ||| | | ||||| Sbjct 30626328 GATATCAAGAGAGGGAAATTTTCTCAAGATGA 30626297 Score = 55.4 bits (60), Expect = 4e-05 Identities = 68/93 (73%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| | || |||||| | ||||| || | || |||||| ||||||| | |||| Sbjct 29739695 CAGGCCTTAAGAGGTGCGGAAAGAGTTGCCGCCTTAGGTGGTTGAACTACCTCCGCCCAA 29739754 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAG 434 |||||||| | |||| ||| |||| || |||| Sbjct 29739755 ATATCAAGCACGGAGGTTTTTCAGAAGAGGAAG 29739787 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 562 aaaacaaaaataaaaaaTACGAACATGTGCCAGCA 596 ||||||||||||||| | | || ||||||||||| Sbjct 3345492 AAAACAAAAATAAAACAAAACAAAATGTGCCAGCA 3345458 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 1565 AACCAAGAAGATTCACCAAAAGTTCAAAT 1593 |||||| |||||||||||||||||||| Sbjct 9623387 AACCAAATTGATTCACCAAAAGTTCAAAT 9623415 Score = 39.2 bits (42), Expect = 3.1 Identities = 36/44 (82%), Gaps = 4/44 (9%) Strand=Plus/Minus Query 1333 TATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaaaa 1376 || |||||||||||| |||||| |||| ||||| |||| ||| Sbjct 10711533 TAATATCGCTTATTT--ATAAAAAAAAAAAAAAA--AAAAGAAA 10711494 Score = 39.2 bits (42), Expect = 3.1 Identities = 31/35 (89%), Gaps = 2/35 (6%) Strand=Plus/Minus Query 1358 aaataaaaattaaaaaaaaaaCTAGCATACAAATG 1392 |||| ||||| |||| |||||| |||||||||||| Sbjct 25403384 AAATTAAAAT-AAAATAAAAAC-AGCATACAAATG 25403352 >Query1 on lcl|Jr3D| Query1 on lcl|Jr3D Length=38540051 Score = 51.8 bits (56), Expect = 5e-04 Identities = 55/73 (75%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| ||||||| | ||| | ||||| || |||| || | || ||||| Sbjct 15620077 TGTAGGTGGTCGCTGATTGCGGGGAGAGTGCCAGGTAGAACTGACAACCAAGTAAAAAAC 15620136 Query 1477 TACTGGAACACCC 1489 |||||||||||| Sbjct 15620137 CACTGGAACACCC 15620149 Score = 41.0 bits (44), Expect = 0.90 Identities = 93/136 (68%), Gaps = 12/136 (9%) Strand=Plus/Minus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 ||||||||||||| || || ||| || || | | || ||||||| | |||| ||| Sbjct 11409701 GGAAGAGCTGTAGGCTGAGATGGAACAATTACCTCAGACCTGATATCAAAAGAGGAAAGT 11409642 Query 420 -----TTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAG 474 |||| |||| ||| ||| | || ||| |||||| ||||| || ||||| Sbjct 11409641 TCAGCTTGC--AGGAAGAA-CAGACC--ATCATTCAGCTTCATGCTCTTCTTGGGAACAG 11409587 Query 475 GTACCAATAAATAAAT 490 |||| ||| || ||| Sbjct 11409586 GTAC--ATACATCAAT 11409573 Score = 41.0 bits (44), Expect = 0.90 Identities = 93/136 (68%), Gaps = 12/136 (9%) Strand=Plus/Minus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 ||||||||||||| || || ||| || || | | || ||||||| | |||| ||| Sbjct 11532364 GGAAGAGCTGTAGGCTGAGATGGACCAATTACCTCAGACCTGATATCAAAAGAGGAAAGT 11532305 Query 420 -----TTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAG 474 |||| |||| ||| ||| | || ||| ||||| ||||| |||||||| Sbjct 11532304 TCAGCTTGC--AGGAAGAA-CAGACC--ATCATTCAGCTTCTTGCTCTTCTTGGAAACAG 11532250 Query 475 GTACCAATAAATAAAT 490 |||| ||| || ||| Sbjct 11532249 GTAC--ATACATTAAT 11532236 Score = 41.0 bits (44), Expect = 0.90 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Minus Query 1330 ATATATTATCGCTTATTTTCAtaaaataa 1358 ||||||||| |||||||||||||| |||| Sbjct 31303265 ATATATTAT-GCTTATTTTCATAACATAA 31303238 Score = 39.2 bits (42), Expect = 3.1 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 809 CTTTTCCTTTTACTTTATTCATCTTTGTTAT 839 || ||||||| ||||||||||| ||| |||| Sbjct 14341835 CTCTTCCTTTCACTTTATTCATATTTATTAT 14341805 Score = 39.2 bits (42), Expect = 3.1 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 723 GCAAAAATTAAATTAATATAT 743 ||||||||||||||||||||| Sbjct 15602675 GCAAAAATTAAATTAATATAT 15602695 >Query1 on lcl|Jm3D| Query1 on lcl|Jm3D Length=39900371 Score = 51.8 bits (56), Expect = 5e-04 Identities = 55/73 (75%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1417 TGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAAT 1476 || |||||||| ||||||| | ||| | ||||| || |||| || | || ||||| Sbjct 15342878 TGTAGGTGGTCGCTGATTGCGGGGAGAGTGCCAGGTAGAACTGACAACCAAGTAAAAAAC 15342937 Query 1477 TACTGGAACACCC 1489 |||||||||||| Sbjct 15342938 CACTGGAACACCC 15342950 Score = 44.6 bits (48), Expect = 0.074 Identities = 55/72 (76%), Gaps = 4/72 (6%) Strand=Plus/Plus Query 1309 ACTT-TTATTTGTTCATCAATAATATATTAT-CGCTTATTTTCAtaaaataaaataaaaa 1366 |||| |||||||||||| || || |||| || | |||||| | |||| | |||||| Sbjct 7485846 ACTTATTATTTGTTCATAAAGAAAATATGATAAGATTATTTAATTTAAAT--ATTAAAAA 7485903 Query 1367 ttaaaaaaaaaa 1378 | |||| ||||| Sbjct 7485904 TAAAAAGAAAAA 7485915 Score = 42.8 bits (46), Expect = 0.26 Identities = 94/137 (69%), Gaps = 12/137 (9%) Strand=Plus/Minus Query 360 GGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAAATATCAAGAAAGGAGAGT 419 ||||||||||||| || || ||| || || | | || ||||||| | |||| ||| Sbjct 11373237 GGAAGAGCTGTAGGCTGAGATGGACCAATTACCTCAGACCTGATATCAAAAGAGGAAAGT 11373178 Query 420 -----TTGCAGAGGATGAAGTAGATCTAATAATTAGGCTTCACAAGCTTCTAGGAAACAG 474 |||| |||| ||| ||| | || ||| |||||| ||||| || ||||| Sbjct 11373177 TCAGCTTGC--AGGAAGAA-CAGACC--ATCATTCAGCTTCATGCTCTTCTTGGGAACAG 11373123 Query 475 GTACCAATAAATAAATG 491 |||| ||| || |||| Sbjct 11373122 GTAC--ATACATTAATG 11373108 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/34 (88%), Gaps = 1/34 (3%) Strand=Plus/Plus Query 1021 TCTTGTTTTAGACTAATAATTTTCAAAAATTCTT 1054 ||||| |||||||||| |||||||||||| ||| Sbjct 15512066 TCTTGAGTTAGACTAAT-ATTTTCAAAAATACTT 15512098 Score = 41.0 bits (44), Expect = 0.90 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 810 TTTTCCTTTTACTTTATTCATC 831 |||||||||||||||||||||| Sbjct 28605739 TTTTCCTTTTACTTTATTCATC 28605760 >Query1 on lcl|Jm7D| Query1 on lcl|Jm7D Length=26765518 Score = 48.2 bits (52), Expect = 0.006 Identities = 54/70 (77%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTT-CCAGGCAGGACTGCGAATAATGTGAAAAATTA 1478 ||||||||| | || ||| | | || ||||||||||||| ||| || | || || || Sbjct 14186997 AGGTGGTCAATTATAGCT-GCTCAGTTGCCAGGCAGGACTGATAATGATATCAAGAACTA 14186939 Query 1479 CTGGAACACC 1488 |||||||||| Sbjct 14186938 CTGGAACACC 14186929 Score = 46.4 bits (50), Expect = 0.021 Identities = 42/53 (79%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1322 CATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaa 1374 || ||| ||||||||||| || || | | ||| |||||||||| ||||||| Sbjct 1518162 CACCAAAAATATATTATCTATTTTTCTATTTAAAAAAAATAAAAAATAAAAAA 1518214 Score = 41.0 bits (44), Expect = 0.90 Identities = 39/49 (80%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 1357 aaaataaaaatt-aaaaaaaaaaCTAGCATACAAATGTATTAACTTTCT 1404 |||||| ||||| |||||||||| | | |||| | ||||||||||| Sbjct 760870 AAAATATAAATTGAAAAAAAAAAAAAAAACACAATTCAATTAACTTTCT 760918 >Query1 on lcl|Jr5S| Query1 on lcl|Jr5S Length=32184663 Score = 44.6 bits (48), Expect = 0.074 Identities = 38/47 (81%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 906 AAAGAGGGAAAGATGTTTGGTAGCGTTGGGTTCGGGCTTAGTTAGTA 952 || ||| ||||||||||| ||||| ||||||| || ||| ||| || Sbjct 20281257 AAGGAGAGAAAGATGTTTAGTAGCATTGGGTTGGGTCTTTTTTATTA 20281211 Score = 41.0 bits (44), Expect = 0.90 Identities = 54/75 (72%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTG 1470 || |||| || |||||| |||||| || ||||| || || |||| ||| | | Sbjct 18074137 ATTTATTTCAGATGGTCAGCAATTGCTGCAAAGCTTCCCGGAAGAACTGGAAATGAAATA 18074196 Query 1471 AAAAATTACTGGAAC 1485 |||||||||||| || Sbjct 18074197 AAAAATTACTGGCAC 18074211 Score = 41.0 bits (44), Expect = 0.90 Identities = 46/59 (78%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 1432 ATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGGAACACCC 1489 |||||| | ||| |||||||| || |||| ||| | | |||||||||||| || ||| Sbjct 18092272 ATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAATAAAAAATTACTGGCACGCCC 18092329 Score = 41.0 bits (44), Expect = 0.90 Identities = 46/59 (78%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 1432 ATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGGAACACCC 1489 |||||| | ||| |||||||| || |||| ||| | | |||||||||||| || ||| Sbjct 18105838 ATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAATAAAAAATTACTGGCACGCCC 18105895 Score = 41.0 bits (44), Expect = 0.90 Identities = 46/59 (78%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 1432 ATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGGAACACCC 1489 |||||| | ||| |||||||| || |||| ||| | | |||||||||||| || ||| Sbjct 18119408 ATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAATAAAAAATTACTGGCACGCCC 18119465 Score = 41.0 bits (44), Expect = 0.90 Identities = 33/40 (83%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 607 tttttttttcttttttttttGTCTCGAAAGGACAAAATAA 646 ||||||||| |||||||||| | | | ||||||||||| Sbjct 26899214 TTTTTTTTTTTTTTTTTTTTTTTTTTTATGGACAAAATAA 26899253 Score = 39.2 bits (42), Expect = 3.1 Identities = 44/58 (76%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1312 TTTATTTGTTCATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaatta 1369 ||||||| | || | ||||||||||| | |||||||| |||| | |||||||| Sbjct 6656316 TTTATTTTATTATTA-TAATATATTATATATATTTTTCATATAATATATAAAAAATTA 6656372 Score = 39.2 bits (42), Expect = 3.1 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Minus Query 1021 TCTTGTTTTAGACTAATAATTTTCAAAAATTCT 1053 ||||| |||||||||| |||||||||||| || Sbjct 18988534 TCTTGAGTTAGACTAAT-ATTTTCAAAAATACT 18988503 Score = 39.2 bits (42), Expect = 3.1 Identities = 29/33 (88%), Gaps = 1/33 (3%) Strand=Plus/Plus Query 1021 TCTTGTTTTAGACTAATAATTTTCAAAAATTCT 1053 ||||| |||||||||| |||||||||||| || Sbjct 25033057 TCTTGAGTTAGACTAAT-ATTTTCAAAAATACT 25033088 >Query1 on lcl|Jr5D| Query1 on lcl|Jr5D Length=33932481 Score = 44.6 bits (48), Expect = 0.074 Identities = 54/74 (73%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 1415 ATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAA 1474 |||| ||||||||| | || || | | |||||||| |||| ||| || | || | Sbjct 24733245 ATTGCAGGTGGTCAATAATAGCAGCTCGGTTGCCAGGCAGAACTGACAATGATATTAAGA 24733304 Query 1475 ATTACTGGAACACC 1488 | |||||||||||| Sbjct 24733305 ACTACTGGAACACC 24733318 Score = 42.8 bits (46), Expect = 0.26 Identities = 50/68 (74%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTAC 1479 || ||||| | |||||| || ||||| || || |||| ||| | | ||||||||| Sbjct 18220388 AGATGGTCTGTTATTGCTGCAAAGCTTCCCGGAAGAACTGACAATGAAATTAAAAATTAC 18220447 Query 1480 TGGAACAC 1487 ||| |||| Sbjct 18220448 TGGCACAC 18220455 Score = 42.8 bits (46), Expect = 0.26 Identities = 48/64 (75%), Gaps = 8/64 (13%) Strand=Plus/Plus Query 1323 ATCAATAATATATTAT-------CGCTTATTTTCAtaaaataaaa-taaaaattaaaaaa 1374 |||||||||||||||| ||||||||| |||||||| || | ||||| ||| Sbjct 27545528 ATCAATAATATATTATAAGAAAATTAATATTTTCATGAAATAAAATTACATATTAACAAA 27545587 Query 1375 aaaa 1378 |||| Sbjct 27545588 AAAA 27545591 Score = 42.8 bits (46), Expect = 0.26 Identities = 38/45 (84%), Gaps = 2/45 (4%) Strand=Plus/Minus Query 1349 CAtaaaataaaataaaaat-taaa-aaaaaaaCTAGCATACAAAT 1391 ||| |||| | | ||||| |||| |||||||||||||||||||| Sbjct 31549734 CATGAAATTAGACAAAAACATAAACAAAAAAACTAGCATACAAAT 31549690 Score = 41.0 bits (44), Expect = 0.90 Identities = 52/70 (74%), Gaps = 9/70 (13%) Strand=Plus/Minus Query 1311 TTTTATTTGTTCATCAATAATATATTA----TCGCTTATTT--TCAtaaaataaaataaa 1364 ||||| || || | |||||||||||| || || |||| | || |||||| ||| Sbjct 28026524 TTTTAATTTTTTTTAAATAATATATTAATAGTCACTCATTTAATTATTAAATAA---AAA 28026468 Query 1365 aattaaaaaa 1374 |||||||||| Sbjct 28026467 AATTAAAAAA 28026458 Score = 41.0 bits (44), Expect = 0.90 Identities = 34/42 (81%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 294 GTGACAAGTTTTGTGATAAAAACTCAATTTTTGCATTATGCA 335 |||| |||| ||||||||||||| | ||||| ||| |||| Sbjct 31232127 GTGATAAGTGTTGTGATAAAAACCCTATTTTCACATGTTGCA 31232168 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Plus Query 1327 ATAATA-TATTATCGCTTATTTTCAtaa 1353 |||||| |||| |||||||||||||||| Sbjct 14081134 ATAATAATATTCTCGCTTATTTTCATAA 14081161 Score = 39.2 bits (42), Expect = 3.1 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1510 ATGAAAAAGATAAAAGACAAA 1530 ||||||||||||||||||||| Sbjct 32901885 ATGAAAAAGATAAAAGACAAA 32901865 >Query1 on lcl|Jm5D| Query1 on lcl|Jm5D Length=35798223 Score = 44.6 bits (48), Expect = 0.074 Identities = 45/56 (80%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 1056 AGGAGTTTGCTGTGAttttttttctatttaaaatttttatttctttttaggttttG 1111 ||||||||||| || || |||||| ||| | ||||| ||| ||| ||||||||| Sbjct 452004 AGGAGTTTGCTAAGA-TTGTTTTCTTTTTCATCTTTTT-TTTTTTTCTAGGTTTTG 452057 Score = 42.8 bits (46), Expect = 0.26 Identities = 56/75 (75%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 1415 ATTGAAGGTGGTCATTGATTGCTCGAAGACTT-CCAGGCAGGACTGCGAATAATGTGAAA 1473 |||| ||||||||| | || || | | || |||||||| |||| ||| || | || Sbjct 26113917 ATTGCAGGTGGTCAATAATAGCA-GCTCAGTTGCCAGGCAGAACTGACAATGATATTAAG 26113975 Query 1474 AATTACTGGAACACC 1488 || |||||||||||| Sbjct 26113976 AACTACTGGAACACC 26113990 Score = 42.8 bits (46), Expect = 0.26 Identities = 50/63 (79%), Gaps = 5/63 (8%) Strand=Plus/Minus Query 1311 TTTTATTTGTTCATCAA-TAATATATTATCGCTTATTTTCAtaa-aataaaat-aaaaat 1367 ||| ||||||||||||| || ||||||| | || ||| | || |||||||| || ||| Sbjct 32497323 TTTAATTTGTTCATCAATTATTATATTA--GTTTTTTTAAAAAATAATAAAATCAATAAT 32497266 Query 1368 taa 1370 ||| Sbjct 32497265 TAA 32497263 Score = 42.8 bits (46), Expect = 0.26 Identities = 38/45 (84%), Gaps = 2/45 (4%) Strand=Plus/Minus Query 1349 CAtaaaataaaataaaaat-taaa-aaaaaaaCTAGCATACAAAT 1391 ||| |||| | | ||||| |||| |||||||||||||||||||| Sbjct 33504408 CATGAAATTAGACAAAAACATAAACAAAAAAACTAGCATACAAAT 33504364 Score = 41.0 bits (44), Expect = 0.90 Identities = 33/39 (85%), Gaps = 1/39 (3%) Strand=Plus/Plus Query 608 ttttttttcttttttttttGTCTCGAA-AGGACAAAATA 645 |||||||| ||||||||| || | || ||||||||||| Sbjct 2578330 TTTTTTTTTTTTTTTTTTCGTTTGTAATAGGACAAAATA 2578368 Score = 39.2 bits (42), Expect = 3.1 Identities = 39/48 (81%), Gaps = 2/48 (4%) Strand=Plus/Plus Query 1329 AATATATTATCGCTTATTTTCAtaaaataa-aataaa-aattaaaaaa 1374 ||||| |||||||||||| | ||||||| |||||| || || |||| Sbjct 6661555 AATATGCAATCGCTTATTTTAAAAAAATAATAATAAATAAATATAAAA 6661602 Score = 39.2 bits (42), Expect = 3.1 Identities = 42/56 (75%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 1432 ATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAATTACTGGAACAC 1487 |||||| || ||||| || || |||| ||| | | |||||||||||| |||| Sbjct 19261065 ATTGCTGCAAAGCTTCCTGGAAGAACTGACAATGAAATTAAAAATTACTGGCACAC 19261120 >Query1 on lcl|Jr7D| Query1 on lcl|Jr7D Length=29017359 Score = 42.8 bits (46), Expect = 0.26 Identities = 53/70 (76%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTT-CCAGGCAGGACTGCGAATAATGTGAAAAATTA 1478 ||||||||| | || ||| | | || ||||||||||||| || || | || || || Sbjct 14954558 AGGTGGTCAATTATAGCT-GCTCAGTTGCCAGGCAGGACTGATAACGATATCAAGAACTA 14954500 Query 1479 CTGGAACACC 1488 |||||||||| Sbjct 14954499 CTGGAACACC 14954490 Score = 41.0 bits (44), Expect = 0.90 Identities = 36/44 (82%), Gaps = 2/44 (5%) Strand=Plus/Minus Query 1060 GTTTGCTGTGAttttttttctatttaaaatttttatttcttttt 1103 ||||||||||||||||||| | ||| || || ||| || |||| Sbjct 10946788 GTTTGCTGTGATTTTTTTTTTTTTTTAA--TTCTATGTCGTTTT 10946747 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 612 ttttcttttttttttGTCTCGAAAGG 637 |||| ||||| ||||||||||||||| Sbjct 13653983 TTTTGTTTTTATTTTGTCTCGAAAGG 13653958 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Minus Query 762 TTTGCTCTTTGTTTTCTTGGGTGAAATTT 790 |||||||| || |||||||||||||||| Sbjct 27419732 TTTGCTCTCCGTGTTCTTGGGTGAAATTT 27419704 >Query1 on lcl|Jr4S| Query1 on lcl|Jr4S Length=30027985 Score = 42.8 bits (46), Expect = 0.26 Identities = 53/73 (73%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1416 TTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTGAAAAA 1475 ||| || ||||| ||||||| | || || ||||| || || | ||| | | || || Sbjct 1743269 TTGCAGATGGTCTCTGATTGCAGGGAGGCTACCAGGAAGAACGGACAATGAAATCAAGAA 1743210 Query 1476 TTACTGGAACACC 1488 |||||||||| || Sbjct 1743209 TTACTGGAACTCC 1743197 Score = 42.8 bits (46), Expect = 0.26 Identities = 74/107 (69%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 342 CAGGGTTGAACAGGTGCAGGAAGAGCTGTAGACTAAGGTGGGTGAACTATTTGAAGCCAA 401 |||| | || || ||| | || || || | || || ||| | |||||| | |||| Sbjct 5198168 CAGGTCTTAAGAGATGCGGCAAAAGTTGCCGGCTTAGATGGTTAAACTATCTACGCCCAA 5198109 Query 402 ATATCAAGAAAGGAGAGTTTGCAGAGGATGAAGTAGATCTAATAATT 448 |||||||| | |||| ||| |||| || || ||||| |||||| Sbjct 5198108 ATATCAAGCATGGAGGATTTTCAGAAGAGGA---AGATCACATAATT 5198065 Score = 39.2 bits (42), Expect = 3.1 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1036 ATAATTTTCAAAAATTCTTTA 1056 ||||||||||||||||||||| Sbjct 228515 ATAATTTTCAAAAATTCTTTA 228535 Score = 39.2 bits (42), Expect = 3.1 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 163 ACTTCTACACTCATTGTTAATTGGTTTTCTG 193 |||||||| || |||||||||||| ||| || Sbjct 1674305 ACTTCTACTCTTATTGTTAATTGGATTTTTG 1674335 >Query1 on lcl|Jm5S| Query1 on lcl|Jm5S Length=32113326 Score = 42.8 bits (46), Expect = 0.26 Identities = 59/80 (74%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGT 1469 || |||| || ||||| |||||| | ||| |||||||| || |||| ||| | | Sbjct 18723176 ATTTATTTCAGATGGTCTGCAATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAAT 18723118 Query 1470 GAAAAATTACTGGAACACCC 1489 |||||||||||| || ||| Sbjct 18723117 AAAAAATTACTGGCACGCCC 18723098 Score = 42.8 bits (46), Expect = 0.26 Identities = 59/80 (74%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGT 1469 || |||| || ||||| |||||| | ||| |||||||| || |||| ||| | | Sbjct 18753574 ATTTATTTCAGATGGTCTGCAATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAAT 18753516 Query 1470 GAAAAATTACTGGAACACCC 1489 |||||||||||| || ||| Sbjct 18753515 AAAAAATTACTGGCACGCCC 18753496 Score = 42.8 bits (46), Expect = 0.26 Identities = 59/80 (74%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCT-CGAAGACTTCCAGGCAGGACTGCGAATAATGT 1469 || |||| || ||||| |||||| | ||| |||||||| || |||| ||| | | Sbjct 18890568 ATTTATTTCAGATGGTCTGCAATTGCTGCCAAG-CTTCCAGGAAGAACTGACAATGAAAT 18890510 Query 1470 GAAAAATTACTGGAACACCC 1489 |||||||||||| || ||| Sbjct 18890509 AAAAAATTACTGGCACGCCC 18890490 Score = 39.2 bits (42), Expect = 3.1 Identities = 56/79 (71%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 1411 ATGTATTGAAGGTGGTCATTGATTGCTCGAAGACTTCCAGGCAGGACTGCGAATAATGTG 1470 || |||| || ||||| |||||| || |||||||| || | || ||| | | Sbjct 18593701 ATTTATTTTAGATGGTCTGCAATTGCTGCAAAGCTTCCAGGAAGAAGTGACAATGAAATA 18593642 Query 1471 AAAAATTACTGGAACACCC 1489 |||||||||||| || ||| Sbjct 18593641 AAAAATTACTGGCACGCCC 18593623 >Query1 on lcl|Jr8S| Query1 on lcl|Jr8S Length=19617005 Score = 41.0 bits (44), Expect = 0.90 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Plus Query 1330 ATATATTATCGCTTATTTTCAtaaaataa 1358 ||||||||| |||||||||||||| |||| Sbjct 8458226 ATATATTAT-GCTTATTTTCATAACATAA 8458253 Score = 41.0 bits (44), Expect = 0.90 Identities = 46/59 (78%), Gaps = 6/59 (10%) Strand=Plus/Minus Query 1316 TTTGTTCATCAATAATATATTATCGCTTATTTTCAtaaaataaaataaaaattaaaaaa 1374 ||||||||||| | |||||| || || ||| |||| | ||| ||||||||||||| Sbjct 17287318 TTTGTTCATCATTCATATATCAT---ATA-TTTGATAAGAGAAA--AAAAATTAAAAAA 17287266 Score = 39.2 bits (42), Expect = 3.1 Identities = 26/28 (93%), Gaps = 1/28 (4%) Strand=Plus/Minus Query 1330 ATATATTATCGCTTATTTTCAtaaaata 1357 ||||||||| |||||||||||||| ||| Sbjct 16554414 ATATATTAT-GCTTATTTTCATAACATA 16554388 >Query1 on lcl|Jr7S| Query1 on lcl|Jr7S Length=22705590 Score = 41.0 bits (44), Expect = 0.90 Identities = 52/69 (75%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTT-CCAGGCAGGACTGCGAATAATGTGAAAAATTA 1478 |||||||| | ||||| || | || ||||| ||||||| ||| | | || ||||| Sbjct 12390171 AGGTGGTCGATAATTGC-CGCTCAGTTGCCAGGTAGGACTGACAATGACATCAAGAATTA 12390113 Query 1479 CTGGAACAC 1487 ||||||||| Sbjct 12390112 CTGGAACAC 12390104 >Query1 on lcl|Jm8S| Query1 on lcl|Jm8S Length=19962766 Score = 41.0 bits (44), Expect = 0.90 Identities = 39/50 (78%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 1036 ATAATTTTCAAAAATTCTTTAGGAGTTTGCTGTGAttttttttctattta 1085 |||| ||| || ||| ||||||||||| | ||| ||||||| | |||| Sbjct 3339823 ATAACTTTTAAGAATGATTTAGGAGTTTTTTATGAGTTTTTTTTTTTTTA 3339774 Score = 41.0 bits (44), Expect = 0.90 Identities = 30/35 (86%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1385 TACAAATGTATTAACTTTCTCATGCTATGTATTGA 1419 ||||||||||| || ||||||| | ||||||||| Sbjct 5680186 TACAAATGTATGAAATTTCTCAGTCAATGTATTGA 5680220 >Query1 on lcl|Jm7S| Query1 on lcl|Jm7S Length=21889424 Score = 41.0 bits (44), Expect = 0.90 Identities = 29/32 (91%), Gaps = 1/32 (3%) Strand=Plus/Minus Query 1361 taaaaattaaaaaaaaaaC-TAGCATACAAAT 1391 |||| ||||||||||||| |||||||||||| Sbjct 8263248 TAAATATTAAAAAAAAAAAATAGCATACAAAT 8263217 Score = 41.0 bits (44), Expect = 0.90 Identities = 52/69 (75%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 1420 AGGTGGTCATTGATTGCTCGAAGACTT-CCAGGCAGGACTGCGAATAATGTGAAAAATTA 1478 |||||||| | ||||| || | || ||||| ||||||| ||| | | || ||||| Sbjct 12372227 AGGTGGTCGATAATTGC-CGCTCAGTTGCCAGGTAGGACTGACAATGACATCAAGAATTA 12372169 Query 1479 CTGGAACAC 1487 ||||||||| Sbjct 12372168 CTGGAACAC 12372160 Score = 41.0 bits (44), Expect = 0.90 Identities = 32/37 (86%), Gaps = 1/37 (3%) Strand=Plus/Minus Query 1357 aaaataaaaattaaaaaaaaaaCTAGCATACAAATGT 1393 ||||||||||| |||||| | | | |||||||||||| Sbjct 19138691 AAAATAAAAAT-AAAAAAGAGAGTTGCATACAAATGT 19138656 Score = 39.2 bits (42), Expect = 3.1 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 730 TTAAATTAATATATCCATACG 750 ||||||||||||||||||||| Sbjct 7854091 TTAAATTAATATATCCATACG 7854111 Score = 39.2 bits (42), Expect = 3.1 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Plus Query 153 GACATCCTGAACTTCTACACTCATTG 178 ||||| |||||| ||||||||||||| Sbjct 9178655 GACATTCTGAACATCTACACTCATTG 9178680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1929609314120 Database: JrSerr_genome.fa Posted date: Apr 26, 2019 2:59 PM Number of letters in database: 534,671,929 Number of sequences in database: 73 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2