BLAST Results
BLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Jm3101_genome.fa 154 sequences; 527,895,757 total letters Query= 1 Length=2139 Score E Sequences producing significant alignments: (Bits) Value lcl|Jm2D 374 2e-101 lcl|Jm2S 118 2e-24 lcl|Jm6D 93.3 9e-17 lcl|Jm3D 44.6 0.043 lcl|Jm1D 41.0 0.52 lcl|Jm7S 39.2 1.8 lcl|Jm5S 39.2 1.8 lcl|Jm5D 39.2 1.8 lcl|Jm4S 39.2 1.8 lcl|Jm1S 39.2 1.8 lcl|Jm8D 37.4 6.3 lcl|Jm7D 37.4 6.3 lcl|Jm6S 37.4 6.3 lcl|Jm3S 37.4 6.3 >1 on lcl|Jm2D| 1 on lcl|Jm2D Length=43614719 Score = 374 bits (414), Expect = 2e-101 Identities = 436/585 (75%), Gaps = 9/585 (2%) Strand=Plus/Plus Query 57 TCCGTTTATATTTGGATGGCTTGTAACTGGATCTGTTGGCCTTCTGGCTGTTATCTACAC 116 ||| ||| | ||||| ||||| || ||||||| |||| ||||| |||| || || | Sbjct 40244879 TCCATTTGTTTTTGGGTGGCTGGTCACTGGATTATTTGGGCTTCTAGCTGCCATATATGC 40244938 Query 117 ATTTCTTAAATGGCAGaaaaaaaCTTCTTTAAATTGGGTTAAAGCTGCTGCTAGAGAGAA 176 ||||||||| ||||| |||| ||| ||| | | ||||||||||||||||| | || || Sbjct 40244939 ATTTCTTAAGTGGCAAAAAAGAACATCTCTTGAATGGGTTAAAGCTGCTGCAAAAGCAAA 40244998 Query 177 GAAGAAGGTATGGAAAAGACTGAGAGTTCCACTTTCTCATCATCAATGGACTGATGATTA 236 ||| ||||| |||| | || | |||||| || || || ||| |||| || |||| Sbjct 40244999 GAAAAAGGTCAGGAAGAATCTAAAAGTTCCTCTATCACACCATTTGTGGATGGAAGATTT 40245058 Query 237 TGGTTATGGGCAACAGCCATCCACTTGCTGTGTTTGTCTCTACTCCCTTGTTCCAGGTCA 296 || |||||| ||||||||||||| ||||| || || || ||| | || || | ||| Sbjct 40245059 TGCTTATGGTGAACAGCCATCCACGTGCTGCGTCTG-CTTGACTTCATTATTTCC--TCA 40245115 Query 297 AAATGTTTCTAATAAAG---CATCTCTGAGTATTCCCGTCCACCGATGTGCTGTATGCGG 353 ||| | || || | |||| || || ||| ||||| || || |||| || || Sbjct 40245116 AAACTTAGGTACAAAGGACTCATCACT---TACTCCTGTCCATCGTTGCTCTGTTTGTGG 40245172 Query 354 TGTAGCAGCTCACTTTTATTGCTCAAGCTCTGCAGCAAAAGACTGCAAATGTGTTGCACA 413 ||| |||||||| || ||||| || || |||| ||| || || || ||||| ||||| Sbjct 40245173 TGTGGCAGCTCATTTCTATTGTTCTCAGTCCGCAGTAAAGGATTGTAAGTGTGTGGCACA 40245232 Query 414 GGCTGGGTCTGACCATGTCCGACATCACTGGTCTGAGCGATGGGTTAACATGGATGATAA 473 ||||| | ||||||| ||||| |||||||| || ||||||||| ||||||||||| Sbjct 40245233 AGCTGGCCATAACCATGTTCGACACCACTGGTCAGAAAGATGGGTTACTATGGATGATAA 40245292 Query 474 TGCTGACATGACTGCCTTTTGCTTCTACTGTGATGAACCTTGTGGTATTCCTTTCATTGA 533 | |||| || |||| ||||| | | ||||||||||||||||||| ||||||| |||| Sbjct 40245293 TCCTGAGATTTCTGCGTTTTGTCTTTTCTGTGATGAACCTTGTGGTGTTCCTTTTCTTGA 40245352 Query 534 AGCTTCTCCTATGTGGCACTGTCTTTGGTGCCAGCGCCTCATACATGTTAAGTGTCACAT 593 || ||||||| ||||| || || ||||| ||||||||||| ||||| || ||||| Sbjct 40245353 TGCATCTCCTACATGGCATTGCCTATGGTGTCAGCGCCTCATGCATGTCAAATGTCATGC 40245412 Query 594 GATTATGTCCAAGGAATCTGGTGATGCTTGTGATCTTGGCTCTCT 638 | ||| | || ||||||||||||| ||||||||| || |||| Sbjct 40245413 TAAAATGGCTAAAGAATCTGGTGATGTTTGTGATCTGGGTCCTCT 40245457 Score = 221 bits (244), Expect = 3e-55 Identities = 245/325 (75%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 1171 GTGAAGTATTTTAGAGTTTTGGTGTGTGGAGGAGATGGAACAGTTGCATGGGTGCTTGAT 1230 || || |||||||| |||||||| ||||| |||||||| || ||||||||||| |||||| Sbjct 40246867 GTAAAATATTTTAGGGTTTTGGTTTGTGGTGGAGATGGCACCGTTGCATGGGTCCTTGAT 40246926 Query 1231 GCTATTGAGAAGCGCAATTTCGAATCCCCTCCACCTGTCGCTATTCTTCCTTTAGGCACA 1290 || ||||||||| |||||| ||||| |||||||| || ||||||||||| | || ||| Sbjct 40246927 GCGATTGAGAAGTACAATTTTGAATCACCTCCACCAGTTGCTATTCTTCCACTCGGTACA 40246986 Query 1291 GGAAATGATTTATCTAGAGTTTTGCAGTGGGGAAGAGGTATTTCAGTAGTTGATGGACAA 1350 ||||||||||| || || || |||| ||||| || ||| | || ||||||| ||||| Sbjct 40246987 GGAAATGATTTGTCAAGGGTACTGCAATGGGGTAGCGGTTTCTCTACAGTTGATAGACAA 40247046 Query 1351 GGAAGTCTAAGAACGTTTTTGCAAGACATTGATCATGCTGCAGTTACAATGTTGGATCGA 1410 || | | | || ||||||| ||| || ||||||||||||| |||||| | || || Sbjct 40247047 GGTGGCTTGACCACACTTTTGCATGACGTTAATCATGCTGCAGTAACAATGCTAGACCGC 40247106 Query 1411 TGGAGTGTTAAAATTGTAGAAGAGAGTACAGAA--AAATTTCCAGCAAGAGAAGGCCATA 1468 |||| | || ||| |||||| | ||||| ||| | | || | | ||| | Sbjct 40247107 TGGAAAATAAATATTAAAGAAGAAAACCCAGAAGGCAATCTTAATAAATTGCAATCCACA 40247166 Query 1469 AGTTTATGATGAATTACTTAGGTAT 1493 || |||||||| || |||||||| Sbjct 40247167 --TTCATGATGAACTATTTAGGTAT 40247189 Score = 170 bits (188), Expect = 4e-40 Identities = 112/124 (90%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1564 CAGTTTGTAAATAAATTACGATATGCTAAAGAAGGTGCGAGGGATATAATGGATCGAGCA 1623 |||||||| |||||||| |||||||| |||||||| || ||||| ||||||||| || | Sbjct 40247597 CAGTTTGTGAATAAATTGCGATATGCCAAAGAAGGAGCAAGGGACATAATGGATAGAACT 40247656 Query 1624 TGTGCCGATTTACCATGGCAAGTTTGGCTTGAAGTTGATGGAAAAGACATTGAAATTCCT 1683 ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 40247657 TGTGCCGATTTACCATGGCAAGTTTGGCTTGAAGTTGATGGGAAGGACATTGAAATTCCA 40247716 Query 1684 AAGG 1687 |||| Sbjct 40247717 AAGG 40247720 Score = 156 bits (172), Expect = 9e-36 Identities = 136/169 (80%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 1685 AGGATTCAGAGGGTCTAATAGTACTTAACATTGGAAGCTATATGGGTGGAGTAGATCTTT 1744 ||||||| |||||| | || || || |||||||| |||||||||||||| |||||||||| Sbjct 40247828 AGGATTCTGAGGGTTTGATTGTGCTCAACATTGGCAGCTATATGGGTGGTGTAGATCTTT 40247887 Query 1745 GGCAAAATGATTATGAACACGATGATAATTTTAGCATTCAGTGTATGCACGACAAGACTC 1804 |||||||||| ||||| || ||| || ||||||| | || | ||||| || || | Sbjct 40247888 GGCAAAATGACTATGAGCATGATAATGATTTTAGTCTGCAATCCATGCATGATAAATTGC 40247947 Query 1805 TAGAGGTGGTATGTGTCCGTGGAGCGTGGCACCTTGGCAAACTACAGGT 1853 | ||||| |||||||| |||||| ||||| ||||||||||| ||||| Sbjct 40247948 TTGAGGTTGTATGTGTTTCTGGAGCATGGCAGCTTGGCAAACTTCAGGT 40247996 Score = 118 bits (130), Expect = 2e-24 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1847 TACAGGTCGGTCTTTCTCAGGCTAGGAGGTTAGCACAGGGAAAGGTAATAAGAATACATG 1906 ||||||| || ||||| || || || | |||| || || | || |||||||||||| Sbjct 40248399 TACAGGTTGGACTTTCCCAAGCCAGAAAACTAGCTCAAGGCCAAGTCATAAGAATACATT 40248458 Query 1907 TTTCTAGTCCTTTTCCTGTTCAAATAGATGGAGAACCGTTTATCCAGCAACCTGGCTGCT 1966 ||| ||||||||||| ||||||||||| || || || || ||| | ||||||||| ||| Sbjct 40248459 CTTCGAGTCCTTTTCCGGTTCAAATAGACGGGGAGCCATTCATCAAACAACCTGGCAGCT 40248518 Query 1967 TGGAGATAACTCACCACGGGCAGGTGTTTA 1996 | || ||| | | ||| |||||||| |||| Sbjct 40248519 TAGAAATATCACCCCATGGGCAGGTATTTA 40248548 Score = 114 bits (126), Expect = 3e-23 Identities = 115/149 (77%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 1987 CAGGTGTTTATGCTAAGAAGAGCATCGGATGAACCACGAGGGCATGCCGCAGCCATAATG 2046 |||||||| ||| || | || || || ||| || |||||||||| || || || ||| Sbjct 40249256 CAGGTGTTCATGTTACGGAGGGCCTC---TGAGCCCAGAGGGCATGCAGCTGCAATTATG 40249312 Query 2047 AATGAAGTGTTACTCGATGCAGAATGCAAAGGAGTCATAAATGCATCTCAAAAGAAAGTA 2106 | || |||||||| ||||| || || | || |||| ||||| ||||| ||||||||| Sbjct 40249313 ATGGAGGTGTTACTTGATGCTGAGTGTAGGGGCATCATCAATGCTTCTCAGAAGAAAGTA 40249372 Query 2107 CTACTACAGCAAATGGCTCTCCATCTCTC 2135 || || ||||| ||||| ||||||||||| Sbjct 40249373 CTTCTCCAGCAGATGGCCCTCCATCTCTC 40249401 Score = 77.0 bits (84), Expect = 7e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 1487 TAGGTATTGGCTGCGATGCAAAAGTTGCATATGAATTTCATATGATGCGGCAAGAGAAA- 1545 |||||||||| || |||||||| |||||||||||||||||| | | ||| ||| ||| Sbjct 40247258 TAGGTATTGGATGTGATGCAAAGGTTGCATATGAATTTCATGTTACTCGG-GAGATAAAT 40247316 Query 1546 CCTGAGAAGTTTTGTAGTCAG 1566 ||||| ||||| | ||||||| Sbjct 40247317 CCTGAAAAGTTCTATAGTCAG 40247337 >1 on lcl|Jm2S| 1 on lcl|Jm2S Length=34707362 Score = 118 bits (130), Expect = 2e-24 Identities = 173/235 (74%), Gaps = 11/235 (5%) Strand=Plus/Plus Query 400 AAATGTGTTGCACAGGCTGGGTCTGACCATGTCCGACATCACTGGTCTGAGCGATGGGTT 459 || ||||| ||||| ||||| ||| ||||| ||||| | || || || ||| |||| Sbjct 32075482 AATTGTGTGGCACAAGCTGGTCTTGATCATGTTCGACACTAGTGATCAGAAAGATAGGTT 32075541 Query 460 AACATGGATGATAATGCTGA-CATGACTGCCTTTTGCTTCTACTGTGATGAACCTTGTGG 518 || ||||||||||| | | |||| || ||||| | || ||||||||||||| ||| Sbjct 32075542 AATGTGGATGATAAT--TAATCATG---GCTTTTTGTCTTTATTGTGATGAACCTT-TGG 32075595 Query 519 TATTCCTTTCATTGAAGCTTCTCCTATGTGGCACTGTCTTTGGTGCCAGCGCCTCATACA 578 | || || |||| || ||||||| ||| | || || ||||| || | ||||| || Sbjct 32075596 TGTTTATTCTCTTGATGCATCTCCTACATGG-ATTGCCTATGGTGTTAG-GGCTCATGCA 32075653 Query 579 TGTTAAGTGTCACATG-ATTATGTCCAAGGAATCTGGTGATGCTTGTGATCTTGG 632 ||| || |||| |||| | ||| || ||||||||||||||||||| ||| || Sbjct 32075654 TGTCAAATGTC-CATGTAAAATGGTGAAAGAATCTGGTGATGCTTGTGGTCTGGG 32075707 Score = 60.8 bits (66), Expect = 6e-07 Identities = 77/106 (73%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 1014 AGATGCAAGACCGCTTTTAGTCTTTATTAACGCCAAAAGCGGAGGTCAACTCGGTCCTTT 1073 |||||||||||| | || ||||||| || |||| || | | |||||| | | Sbjct 32076100 AGATGCAAGACCTTTGTTGGTCTTTAAAAATGCCAGGAGTGCATGTCAACATGTATTTAG 32076159 Query 1074 TCTTCACAGGAGACTTAATATGCTATTGAATCCAGTACAGGTCTTT 1119 ||||| |||||||| || |||||||| || || ||||| || ||| Sbjct 32076160 TCTTCGAAGGAGACTCAACATGCTATTAAACCCTGTACATGTATTT 32076205 Score = 37.4 bits (40), Expect = 6.3 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 992 TTTCCTTGGTTGATTTGCCCCCAGATGCAA 1021 |||| |||||| |||| |||||||||||| Sbjct 24276196 TTTCATTGGTTTCTTTGTCCCCAGATGCAA 24276167 >1 on lcl|Jm6D| 1 on lcl|Jm6D Length=38364907 Score = 93.3 bits (102), Expect = 9e-17 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 1685 AGGATTCAGAGGGTCTAATAGTACTTAACATTGGAAGCTATATGGGTGGAGTAGATCTTT 1744 ||||| |||| ||| || | || |||||||| ||||| |||||||| |||||||| | Sbjct 8325769 AGGATGCAGAAGGTGTACTTGTTGCCAACATTGGGAGCTACATGGGTGGTGTAGATCTAT 8325710 Query 1745 GGCAAAATGATTATGAACACGATGATAATTTTAGCATTCAGTGTATGCACGACAAGACTC 1804 |||||||||| ||||| ||||||||||| || | |||||| || |||| | Sbjct 8325709 GGCAAAATGAGGATGAAAGTTATGATAATTTTGATCCACAATCTATGCATGATAAGATAC 8325650 Query 1805 TAGAGGTGGTATGTGT-CCGTGGAGCGTGGCACCTTGGCAAACTACAGGT 1853 | ||||| || | | || ||| | |||||||| || || || ||||| Sbjct 8325649 TTGAGGTTGTGAGCATATCGGGGA-CATGGCACCTGGGGAAGCTTCAGGT 8325601 Score = 66.2 bits (72), Expect = 1e-08 Identities = 88/120 (73%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 997 TTGGTTGATTTGCCCCCAGATGCAAGACCGCTTTTAGTCTTTATTAACGCCAAAAGCGGA 1056 ||| |||||||||| ||||||||||| ||| | ||||| || || ||| || || || Sbjct 8329633 TTGATTGATTTGCCTCCAGATGCAAGGCCGTTGTTAGTTTTCATCAACAAGAAGAGTGGG 8329574 Query 1057 GGTCAACTCGGTCCTTTTCTT-CACAGGAGACTTAATATGCTATTGAATCCAGTACAGGT 1115 | ||| | || || ||| ||| | || | |||||||| |||||||| || ||||| Sbjct 8329573 GCTCAGCATGGGGATTCACTTGCAC-GACGATTAAATATGCTTTTGAATCCTGTTCAGGT 8329515 Score = 41.0 bits (44), Expect = 0.52 Identities = 31/37 (84%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 1031 TAGTCTTTATTAACGCCAAAAGCGGAGGTCAACTCGG 1067 ||||||| ||||| ||||||||||||| || || || Sbjct 35487997 TAGTCTTCATTAATTCCAAAAGCGGAGGCCAGCTGGG 35487961 Score = 37.4 bits (40), Expect = 6.3 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2095 CAAAAGAAAGTACTACTACA 2114 |||||||||||||||||||| Sbjct 12979090 CAAAAGAAAGTACTACTACA 12979109 Score = 37.4 bits (40), Expect = 6.3 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 596 TTATGTCCAAGGAATCTGGTGATGCTTG 623 ||||||| |||||| |||||||||||| Sbjct 30458971 TTATGTCAAAGGAAGGTGGTGATGCTTG 30458998 Score = 37.4 bits (40), Expect = 6.3 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 109 ATCTACACATTTCTTAAATG 128 |||||||||||||||||||| Sbjct 33757596 ATCTACACATTTCTTAAATG 33757577 >1 on lcl|Jm3D| 1 on lcl|Jm3D Length=39900371 Score = 44.6 bits (48), Expect = 0.043 Identities = 30/34 (88%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 169 AGAGAGAAGAAGAAGGTATGGAAAAGACTGAGAG 202 ||||||| |||||||||||||| |||| ||||| Sbjct 38591103 AGAGAGATGAAGAAGGTATGGAGAAGAAAGAGAG 38591070 Score = 37.4 bits (40), Expect = 6.3 Identities = 33/39 (85%), Gaps = 2/39 (5%) Strand=Plus/Plus Query 1555 TTTTGTAGTCAGTTTGTAAATAA-ATTACGATATGCTAA 1592 ||||| | ||| ||||||||||| ||||| ||| ||||| Sbjct 12501899 TTTTGAAATCAATTTGTAAATAACATTAC-ATAAGCTAA 12501936 Score = 37.4 bits (40), Expect = 6.3 Identities = 25/28 (89%), Gaps = 0/28 (0%) Strand=Plus/Minus Query 972 TTTAAATTTTATGAAGAAGTTTTCCTTG 999 |||||||||||||| ||| | ||||||| Sbjct 22667137 TTTAAATTTTATGATGAATTATTCCTTG 22667110 >1 on lcl|Jm1D| 1 on lcl|Jm1D Length=49856174 Score = 41.0 bits (44), Expect = 0.52 Identities = 27/29 (93%), Gaps = 1/29 (3%) Strand=Plus/Minus Query 1203 AGATGGAACAGTT-GCATGGGTGCTTGAT 1230 ||||||||||||| ||||||||| ||||| Sbjct 47239857 AGATGGAACAGTTTGCATGGGTGATTGAT 47239829 Score = 39.2 bits (42), Expect = 1.8 Identities = 27/30 (90%), Gaps = 2/30 (7%) Strand=Plus/Minus Query 977 ATTTTATGAAGAAGTTTTCCTTGGTTGATT 1006 |||| |||||||||||||| ||||||||| Sbjct 9042795 ATTTAATGAAGAAGTTTTC--TGGTTGATT 9042768 Score = 39.2 bits (42), Expect = 1.8 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1366 TTTTTGCAAGACATTGATCATGCTGCAGTTA 1396 |||| |||| ||| ||||||||||||| ||| Sbjct 36942882 TTTTCGCAACACACTGATCATGCTGCATTTA 36942912 >1 on lcl|Jm7S| 1 on lcl|Jm7S Length=21889424 Score = 39.2 bits (42), Expect = 1.8 Identities = 27/31 (87%), Gaps = 0/31 (0%) Strand=Plus/Minus Query 219 TCAATGGACTGATGATTATGGTTATGGGCAA 249 |||||||| || | ||||||||||||| ||| Sbjct 20320911 TCAATGGAGTGCTTATTATGGTTATGGACAA 20320881 Score = 37.4 bits (40), Expect = 6.3 Identities = 25/27 (93%), Gaps = 1/27 (4%) Strand=Plus/Plus Query 1901 TACATGTTTCTAGTCCT-TTTCCTGTT 1926 ||||||||||||||||| ||| ||||| Sbjct 15051864 TACATGTTTCTAGTCCTCTTTGCTGTT 15051890 >1 on lcl|Jm5S| 1 on lcl|Jm5S Length=32113326 Score = 39.2 bits (42), Expect = 1.8 Identities = 26/29 (90%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 283 CTTGTTCCAGGTCAAAATGTTTCTAATAA 311 ||||| |||| ||||||||||||||||| Sbjct 17033869 CTTGTACCAGTACAAAATGTTTCTAATAA 17033897 Score = 37.4 bits (40), Expect = 6.3 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Minus Query 1562 GTCAGTTTGTAAATAAATTACGATA 1586 ||||||||||||||||||| | ||| Sbjct 7776151 GTCAGTTTGTAAATAAATTTCTATA 7776127 Score = 37.4 bits (40), Expect = 6.3 Identities = 32/39 (82%), Gaps = 3/39 (8%) Strand=Plus/Plus Query 1632 TTTACCATGGCAAGTTTGGCTTGAAGTTGATGGAAAAGA 1670 |||| ||| | |||||| ||||| ||||||||||||| Sbjct 21517288 TTTAGCATAGGAAGTTT---TTGAACTTGATGGAAAAGA 21517323 Score = 37.4 bits (40), Expect = 6.3 Identities = 32/39 (82%), Gaps = 3/39 (8%) Strand=Plus/Plus Query 1632 TTTACCATGGCAAGTTTGGCTTGAAGTTGATGGAAAAGA 1670 |||| ||| | |||||| ||||| ||||||||||||| Sbjct 21625740 TTTAGCATAGGAAGTTT---TTGAACTTGATGGAAAAGA 21625775 >1 on lcl|Jm5D| 1 on lcl|Jm5D Length=35798223 Score = 39.2 bits (42), Expect = 1.8 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1551 GAAGTTTTGTAGTCAGTTTGT 1571 ||||||||||||||||||||| Sbjct 29009952 GAAGTTTTGTAGTCAGTTTGT 29009972 >1 on lcl|Jm4S| 1 on lcl|Jm4S Length=27577207 Score = 39.2 bits (42), Expect = 1.8 Identities = 24/26 (92%), Gaps = 0/26 (0%) Strand=Plus/Minus Query 766 GGAAAAAATGGGAATGGCCAATCTTT 791 || ||||||||||||||||| ||||| Sbjct 6426512 GGGAAAAATGGGAATGGCCAGTCTTT 6426487 >1 on lcl|Jm1S| 1 on lcl|Jm1S Length=30169828 Score = 39.2 bits (42), Expect = 1.8 Identities = 28/31 (90%), Gaps = 1/31 (3%) Strand=Plus/Plus Query 1502 ATGCAAAAGTTGCATATGAATTTCATATGAT 1532 |||||| || |||||||||||||||||||| Sbjct 23988051 ATGCAAGAGA-GCATATGAATTTCATATGAT 23988080 Score = 37.4 bits (40), Expect = 6.3 Identities = 26/30 (87%), Gaps = 0/30 (0%) Strand=Plus/Minus Query 1840 GGCAAACTACAGGTCGGTCTTTCTCAGGCT 1869 |||||||||| ||||||||||| | | ||| Sbjct 4152837 GGCAAACTACCGGTCGGTCTTTTTTACGCT 4152808 >1 on lcl|Jm8D| 1 on lcl|Jm8D Length=36225362 Score = 37.4 bits (40), Expect = 6.3 Identities = 22/23 (96%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 160 GCTGCTGCTAGAGAGAAGAAGAA 182 || |||||||||||||||||||| Sbjct 20916978 GCAGCTGCTAGAGAGAAGAAGAA 20916956 >1 on lcl|Jm7D| 1 on lcl|Jm7D Length=26765518 Score = 37.4 bits (40), Expect = 6.3 Identities = 23/25 (92%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 165 TGCTAGAGAGAAGAAGAAGGTATGG 189 ||||| |||||||||||| |||||| Sbjct 10732164 TGCTATAGAGAAGAAGAAAGTATGG 10732188 >1 on lcl|Jm6S| 1 on lcl|Jm6S Length=22373256 Score = 37.4 bits (40), Expect = 6.3 Identities = 28/32 (88%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 601 TCCA-AGGAATCTGGTGATGCTTGTGATCTTG 631 |||| ||||||||||||||| || || ||||| Sbjct 389414 TCCACAGGAATCTGGTGATGATTTTGGTCTTG 389445 Score = 37.4 bits (40), Expect = 6.3 Identities = 32/39 (82%), Gaps = 3/39 (8%) Strand=Plus/Minus Query 1632 TTTACCATGGCAAGTTTGGCTTGAAGTTGATGGAAAAGA 1670 |||| ||| | |||||| ||||| ||||||||||||| Sbjct 7418014 TTTAGCATAGAAAGTTT---TTGAACTTGATGGAAAAGA 7417979 >1 on lcl|Jm3S| 1 on lcl|Jm3S Length=27832763 Score = 37.4 bits (40), Expect = 6.3 Identities = 37/44 (84%), Gaps = 3/44 (7%) Strand=Plus/Plus Query 1550 AGAAGTTTTGTAGTCAGTTTGTAAATAA-ATTACGATATGCTAA 1592 |||| ||||| | ||| ||||||||||| ||||| ||| ||||| Sbjct 12628727 AGAA-TTTTGAAATCAATTTGTAAATAACATTAC-ATAAGCTAA 12628768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1112265976703 Database: Jm3101_genome.fa Posted date: Apr 26, 2019 3:00 PM Number of letters in database: 527,895,757 Number of sequences in database: 154 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2